RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 IRF9Q00978 393 aa11.39□□□□□ -0.59
TPM1-216ENST00000558910 PPP1R3AQ16821 1122 aa11.39□□□□□ -0.59
TPM1-216ENST00000558910 GRTP1Q5TC63 336 aa11.39□□□□□ -0.59
TPM1-216ENST00000558910 PRMT9Q6P2P2 845 aa11.39□□□□□ -0.59
TPM1-216ENST00000558910 KIRREL2Q6UWL6 708 aa11.39□□□□□ -0.59
TPM1-216ENST00000558910 GPSM1Q86YR5 675 aa11.39□□□□□ -0.59
TPM1-216ENST00000558910 MMGT1Q8N4V1 131 aa11.39□□□□□ -0.59
TPM1-216ENST00000558910 AMER3Q8N944 861 aa11.39□□□□□ -0.59
TPM1-216ENST00000558910 CAMKVQ8NCB2 501 aa11.39□□□□□ -0.59
TPM1-216ENST00000558910 OR5T3Q8NGG3 340 aa11.39□□□□□ -0.59
TPM1-216ENST00000558910 KIF18AQ8NI77 898 aa11.39□□□□□ -0.59
TPM1-216ENST00000558910 FER1L6-AS2Q96M78 137 aa11.39□□□□□ -0.59
TPM1-216ENST00000558910 RHOXF2Q9BQY4 288 aa11.39□□□□□ -0.59
TPM1-216ENST00000558910 ZBTB20Q9HC78 741 aaPredicted RBP11.39□□□□□ -0.59
TPM1-216ENST00000558910 ZDHHC18Q9NUE0 388 aa11.39□□□□□ -0.59
TPM1-216ENST00000558910 SCN3AQ9NY46 2000 aa11.39□□□□□ -0.59
TPM1-216ENST00000558910 MTRF1LQ9UGC7 380 aaKnown RBP11.39□□□□□ -0.59
TPM1-216ENST00000558910 MKL2Q9ULH7 1088 aa11.39□□□□□ -0.59
TPM1-216ENST00000558910 CDC14AQ9UNH5 594 aa11.39□□□□□ -0.59
TPM1-216ENST00000558910 OARD1Q9Y530 152 aa11.39□□□□□ -0.59
TPM1-216ENST00000558910 HS3ST3B1Q9Y662 390 aa11.39□□□□□ -0.59
TPM1-216ENST00000558910 MDC1Q14676 2089 aaKnown RBP11.39□□□□□ -0.59
TPM1-216ENST00000558910 NBASA2RRP1 2371 aa11.38□□□□□ -0.59
TPM1-216ENST00000558910 IDSB3KWA1 339 aa11.38□□□□□ -0.59
TPM1-216ENST00000558910 POC1B-GALNT4F8VUJ3 575 aa11.38□□□□□ -0.59
TPM1-216ENST00000558910 AGPSO00116 658 aa11.38□□□□□ -0.59
TPM1-216ENST00000558910 TXNDC9O14530 226 aa11.38□□□□□ -0.59
TPM1-216ENST00000558910 MAP2K7O14733 419 aa11.38□□□□□ -0.59
TPM1-216ENST00000558910 CCNT2O60583 730 aaKnown RBP11.38□□□□□ -0.59
TPM1-216ENST00000558910 DNAJB6O75190 326 aa11.38□□□□□ -0.59
TPM1-216ENST00000558910 F10P00742 488 aa11.38□□□□□ -0.59
TPM1-216ENST00000558910 C1QAP02745 245 aa11.38□□□□□ -0.59
TPM1-216ENST00000558910 ALBP02768 609 aa11.38□□□□□ -0.59
TPM1-216ENST00000558910 S100BP04271 92 aaPredicted RBP11.38□□□□□ -0.59
TPM1-216ENST00000558910 CELA2AP08217 269 aa11.38□□□□□ -0.59
TPM1-216ENST00000558910 GSTA2P09210 222 aa11.38□□□□□ -0.59
TPM1-216ENST00000558910 CD1DP15813 335 aa11.38□□□□□ -0.59
TPM1-216ENST00000558910 MMP11P24347 488 aa11.38□□□□□ -0.59
TPM1-216ENST00000558910 CXCR2P25025 360 aa11.38□□□□□ -0.59
TPM1-216ENST00000558910 GLRBP48167 497 aa11.38□□□□□ -0.59
TPM1-216ENST00000558910 DLG1Q12959 904 aa11.38□□□□□ -0.59
TPM1-216ENST00000558910 TGFBIQ15582 683 aa11.38□□□□□ -0.59
TPM1-216ENST00000558910 TUBB8Q3ZCM7 444 aa11.38□□□□□ -0.59
TPM1-216ENST00000558910 PRR30Q53SZ7 412 aaPredicted RBP11.38□□□□□ -0.59
TPM1-216ENST00000558910 NXPE4Q6UWF7 544 aa11.38□□□□□ -0.59
TPM1-216ENST00000558910 LINC00696Q6ZRV3 163 aa11.38□□□□□ -0.59
TPM1-216ENST00000558910 ADAMTSL2Q86TH1 951 aa11.38□□□□□ -0.59
TPM1-216ENST00000558910 MFSD9Q8NBP5 474 aa11.38□□□□□ -0.59
TPM1-216ENST00000558910 KCTD4Q8WVF5 259 aa11.38□□□□□ -0.59
TPM1-216ENST00000558910 NANOS1Q8WY41 292 aaKnown RBP11.38□□□□□ -0.59
TPM1-216ENST00000558910 PEX11GQ96HA9 241 aa11.38□□□□□ -0.59
TPM1-216ENST00000558910 PDLIM5Q96HC4 596 aaKnown RBP11.38□□□□□ -0.59
TPM1-216ENST00000558910 THOC3Q96J01 351 aaKnown RBP11.38□□□□□ -0.59
TPM1-216ENST00000558910 CNDP1Q96KN2 507 aa11.38□□□□□ -0.59
TPM1-216ENST00000558910 GPR22Q99680 433 aa11.38□□□□□ -0.59
TPM1-216ENST00000558910 MCMBPQ9BTE3 642 aa11.38□□□□□ -0.59
TPM1-216ENST00000558910 WDR54Q9H977 334 aa11.38□□□□□ -0.59
TPM1-216ENST00000558910 ANKHQ9HCJ1 492 aa11.38□□□□□ -0.59
TPM1-216ENST00000558910 NAALAD2Q9Y3Q0 740 aa11.38□□□□□ -0.59
TPM1-216ENST00000558910 ZNF451Q9Y4E5 1061 aa11.38□□□□□ -0.59
TPM1-216ENST00000558910 PRRC2CQ9Y520 2896 aaKnown RBP11.38□□□□□ -0.59
TPM1-216ENST00000558910 ASH1LQ9NR48 2969 aaKnown RBP11.38□□□□□ -0.59
TPM1-216ENST00000558910 VSTM2BA6NLU5 285 aa11.37□□□□□ -0.59
TPM1-216ENST00000558910 UBXN8O00124 270 aa11.37□□□□□ -0.59
TPM1-216ENST00000558910 TAPBPO15533 448 aa11.37□□□□□ -0.59
TPM1-216ENST00000558910 PRPF4O43172 522 aaKnown RBP eCLIP11.37□□□□□ -0.59
TPM1-216ENST00000558910 KLHL18O94889 574 aa11.37□□□□□ -0.59
TPM1-216ENST00000558910 WISP1O95388 367 aa11.37□□□□□ -0.59
TPM1-216ENST00000558910 SLC35G6P0C7Q6 338 aa11.37□□□□□ -0.59
TPM1-216ENST00000558910 ZNF888P0CJ79 500 aaPredicted RBP11.37□□□□□ -0.59
TPM1-216ENST00000558910 ACPPP15309 386 aa11.37□□□□□ -0.59
TPM1-216ENST00000558910 TFEBP19484 476 aa11.37□□□□□ -0.59
TPM1-216ENST00000558910 HRH2P25021 359 aa11.37□□□□□ -0.59
TPM1-216ENST00000558910 GPC1P35052 558 aa11.37□□□□□ -0.59
TPM1-216ENST00000558910 CASRP41180 1078 aa11.37□□□□□ -0.59
TPM1-216ENST00000558910 XCR1P46094 333 aa11.37□□□□□ -0.59
TPM1-216ENST00000558910 CD97P48960 835 aa11.37□□□□□ -0.59
TPM1-216ENST00000558910 SLBPQ14493 270 aaKnown RBP eCLIP11.37□□□□□ -0.59
TPM1-216ENST00000558910 DEFB134Q4QY38 66 aa11.37□□□□□ -0.59
TPM1-216ENST00000558910 TOR1AIP1Q5JTV8 583 aa11.37□□□□□ -0.59
TPM1-216ENST00000558910 IRAK1BP1Q5VVH5 260 aa11.37□□□□□ -0.59
TPM1-216ENST00000558910 GARNL3Q5VVW2 1013 aa11.37□□□□□ -0.59
TPM1-216ENST00000558910 LANCL3Q6ZV70 420 aa11.37□□□□□ -0.59
TPM1-216ENST00000558910 TBC1D1Q86TI0 1168 aaPredicted RBP11.37□□□□□ -0.59
TPM1-216ENST00000558910 PDSS2Q86YH6 399 aa11.37□□□□□ -0.59
TPM1-216ENST00000558910 ZC3H7AQ8IWR0 971 aaKnown RBP11.37□□□□□ -0.59
TPM1-216ENST00000558910 GSPT2Q8IYD1 628 aaKnown RBP11.37□□□□□ -0.59
TPM1-216ENST00000558910 VWA5B2Q8N398 1253 aa11.37□□□□□ -0.59
TPM1-216ENST00000558910 TBC1D19Q8N5T2 526 aa11.37□□□□□ -0.59
TPM1-216ENST00000558910 SIRT6Q8N6T7 355 aa11.37□□□□□ -0.59
TPM1-216ENST00000558910 LRRN4CLQ8ND94 238 aa11.37□□□□□ -0.59
TPM1-216ENST00000558910 OR11G2Q8NGC1 345 aa11.37□□□□□ -0.59
TPM1-216ENST00000558910 OR51Q1Q8NH59 317 aa11.37□□□□□ -0.59
TPM1-216ENST00000558910 RHBDF1Q96CC6 855 aa11.37□□□□□ -0.59
TPM1-216ENST00000558910 NXNL1Q96CM4 212 aa11.37□□□□□ -0.59
TPM1-216ENST00000558910 IP6K3Q96PC2 410 aa11.37□□□□□ -0.59
TPM1-216ENST00000558910 FMO2Q99518 471 aa11.37□□□□□ -0.59
TPM1-216ENST00000558910 AIF1LQ9BQI0 150 aa11.37□□□□□ -0.59
TPM1-216ENST00000558910 TMEM79Q9BSE2 394 aa11.37□□□□□ -0.59
TPM1-216ENST00000558910 DERL2Q9GZP9 239 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms