RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 CDC123O75794 336 aaPredicted RBP11.72□□□□□ -0.53
PSEN1-221ENST00000557293 INHBBP09529 407 aa11.72□□□□□ -0.53
PSEN1-221ENST00000557293 ATP5DP30049 168 aa11.72□□□□□ -0.53
PSEN1-221ENST00000557293 ADH7P40394 386 aa11.72□□□□□ -0.53
PSEN1-221ENST00000557293 ZFP36L2P47974 494 aaKnown RBP11.72□□□□□ -0.53
PSEN1-221ENST00000557293 TTPAP49638 278 aa11.72□□□□□ -0.53
PSEN1-221ENST00000557293 GPR85P60893 370 aa11.72□□□□□ -0.53
PSEN1-221ENST00000557293 PRAMEP78395 509 aa11.72□□□□□ -0.53
PSEN1-221ENST00000557293 KCNJ11Q14654 390 aa11.72□□□□□ -0.53
PSEN1-221ENST00000557293 TYSND1Q2T9J0 566 aa11.72□□□□□ -0.53
PSEN1-221ENST00000557293 AARS2Q5JTZ9 985 aaKnown RBP11.72□□□□□ -0.53
PSEN1-221ENST00000557293 LRRC6Q86X45 466 aa11.72□□□□□ -0.53
PSEN1-221ENST00000557293 OR5T3Q8NGG3 340 aa11.72□□□□□ -0.53
PSEN1-221ENST00000557293 PEX13Q92968 403 aa11.72□□□□□ -0.53
PSEN1-221ENST00000557293 PWWP2AQ96N64 755 aa11.72□□□□□ -0.53
PSEN1-221ENST00000557293 ANP32EQ9BTT0 268 aa11.72□□□□□ -0.53
PSEN1-221ENST00000557293 RBCK1Q9BYM8 510 aa11.72□□□□□ -0.53
PSEN1-221ENST00000557293 TREX1Q9NSU2 369 aa11.72□□□□□ -0.53
PSEN1-221ENST00000557293 TMEM184CQ9NVA4 438 aa11.72□□□□□ -0.53
PSEN1-221ENST00000557293 UTP6Q9NYH9 597 aaKnown RBP11.72□□□□□ -0.53
PSEN1-221ENST00000557293 CRIM1Q9NZV1 1036 aa11.72□□□□□ -0.53
PSEN1-221ENST00000557293 Q9UFV3 132 aa11.72□□□□□ -0.53
PSEN1-221ENST00000557293 ANAPC5Q9UJX4 755 aa11.72□□□□□ -0.53
PSEN1-221ENST00000557293 RTTNQ86VV8 2226 aa11.72□□□□□ -0.53
PSEN1-221ENST00000557293 SMAPO00193 183 aa11.71□□□□□ -0.53
PSEN1-221ENST00000557293 MFAP3LO75121 409 aa11.71□□□□□ -0.53
PSEN1-221ENST00000557293 TJP3O95049 919 aa11.71□□□□□ -0.53
PSEN1-221ENST00000557293 ATE1O95260 518 aa11.71□□□□□ -0.53
PSEN1-221ENST00000557293 CCNDBP1O95273 360 aa11.71□□□□□ -0.53
PSEN1-221ENST00000557293 ACVR2AP27037 513 aa11.71□□□□□ -0.53
PSEN1-221ENST00000557293 ARNTP27540 789 aa11.71□□□□□ -0.53
PSEN1-221ENST00000557293 HSD17B2P37059 387 aa11.71□□□□□ -0.53
PSEN1-221ENST00000557293 BTG2P78543 158 aa11.71□□□□□ -0.53
PSEN1-221ENST00000557293 KLHL38Q2WGJ6 581 aa11.71□□□□□ -0.53
PSEN1-221ENST00000557293 P3H1Q32P28 736 aa11.71□□□□□ -0.53
PSEN1-221ENST00000557293 KIAA0408Q6ZU52 694 aa11.71□□□□□ -0.53
PSEN1-221ENST00000557293 CAMKMTQ7Z624 323 aa11.71□□□□□ -0.53
PSEN1-221ENST00000557293 ADCK2Q7Z695 626 aa11.71□□□□□ -0.53
PSEN1-221ENST00000557293 SLC26A11Q86WA9 606 aa11.71□□□□□ -0.53
PSEN1-221ENST00000557293 OR5M9Q8NGP3 310 aa11.71□□□□□ -0.53
PSEN1-221ENST00000557293 OR5M3Q8NGP4 307 aa11.71□□□□□ -0.53
PSEN1-221ENST00000557293 OR10Q1Q8NGQ4 319 aa11.71□□□□□ -0.53
PSEN1-221ENST00000557293 MCOLN3Q8TDD5 553 aa11.71□□□□□ -0.53
PSEN1-221ENST00000557293 FAM136AQ96C01 138 aa11.71□□□□□ -0.53
PSEN1-221ENST00000557293 RMND5BQ96G75 393 aaPredicted RBP11.71□□□□□ -0.53
PSEN1-221ENST00000557293 OR1F2PQ96R84 312 aa11.71□□□□□ -0.53
PSEN1-221ENST00000557293 SLC30A3Q99726 388 aa11.71□□□□□ -0.53
PSEN1-221ENST00000557293 ZDHHC11Q9H8X9 412 aa11.71□□□□□ -0.53
PSEN1-221ENST00000557293 SH2B3Q9UQQ2 575 aa11.71□□□□□ -0.53
PSEN1-221ENST00000557293 NAALAD2Q9Y3Q0 740 aa11.71□□□□□ -0.53
PSEN1-221ENST00000557293 GTF3C3Q9Y5Q9 886 aa11.71□□□□□ -0.53
PSEN1-221ENST00000557293 SLC22A7Q9Y694 548 aa11.71□□□□□ -0.53
PSEN1-221ENST00000557293 CSPG4Q6UVK1 2322 aa11.71□□□□□ -0.54
PSEN1-221ENST00000557293 TCRBV7S2A1N4TA0A589 114 aa11.7□□□□□ -0.54
PSEN1-221ENST00000557293 ZNF860A6NHJ4 632 aa11.7□□□□□ -0.54
PSEN1-221ENST00000557293 A6NNC1 897 aa11.7□□□□□ -0.54
PSEN1-221ENST00000557293 ERI2A8K979 691 aaKnown RBP11.7□□□□□ -0.54
PSEN1-221ENST00000557293 SYT5O00445 386 aa11.7□□□□□ -0.54
PSEN1-221ENST00000557293 KIF5CO60282 957 aa11.7□□□□□ -0.54
PSEN1-221ENST00000557293 NDUFS3O75489 264 aa11.7□□□□□ -0.54
PSEN1-221ENST00000557293 ZNF189O75820 626 aaPredicted RBP11.7□□□□□ -0.54
PSEN1-221ENST00000557293 B3GALT4O96024 378 aa11.7□□□□□ -0.54
PSEN1-221ENST00000557293 IL10P22301 178 aa11.7□□□□□ -0.54
PSEN1-221ENST00000557293 FMO4P31512 558 aa11.7□□□□□ -0.54
PSEN1-221ENST00000557293 COILP38432 576 aaPredicted RBP11.7□□□□□ -0.54
PSEN1-221ENST00000557293 KIR2DL3P43628 341 aa11.7□□□□□ -0.54
PSEN1-221ENST00000557293 DGKQP52824 942 aa11.7□□□□□ -0.54
PSEN1-221ENST00000557293 EIF3BP55884 814 aaKnown RBP11.7□□□□□ -0.54
PSEN1-221ENST00000557293 RWDD2BP57060 319 aa11.7□□□□□ -0.54
PSEN1-221ENST00000557293 TPM4P67936 248 aa11.7□□□□□ -0.54
PSEN1-221ENST00000557293 KLF1Q13351 362 aaPredicted RBP11.7□□□□□ -0.54
PSEN1-221ENST00000557293 DEFB113Q30KQ7 82 aa11.7□□□□□ -0.54
PSEN1-221ENST00000557293 CLEC9AQ6UXN8 241 aa11.7□□□□□ -0.54
PSEN1-221ENST00000557293 CYHR1Q6ZMK1 362 aa11.7□□□□□ -0.54
PSEN1-221ENST00000557293 REXO1L1PQ8IX06 675 aa11.7□□□□□ -0.54
PSEN1-221ENST00000557293 AFAP1L2Q8N4X5 818 aa11.7□□□□□ -0.54
PSEN1-221ENST00000557293 APCDD1LQ8NCL9 501 aa11.7□□□□□ -0.54
PSEN1-221ENST00000557293 FBXO15Q8NCQ5 510 aaPredicted RBP11.7□□□□□ -0.54
PSEN1-221ENST00000557293 MYRIPQ8NFW9 859 aa11.7□□□□□ -0.54
PSEN1-221ENST00000557293 SPATA3Q8NHX4 192 aa11.7□□□□□ -0.54
PSEN1-221ENST00000557293 ZCCHC10Q8TBK6 192 aa11.7□□□□□ -0.54
PSEN1-221ENST00000557293 LPGAT1Q92604 370 aa11.7□□□□□ -0.54
PSEN1-221ENST00000557293 GBP4Q96PP9 640 aa11.7□□□□□ -0.54
PSEN1-221ENST00000557293 EBNA1BP2Q99848 306 aaKnown RBP11.7□□□□□ -0.54
PSEN1-221ENST00000557293 SLC6A16Q9GZN6 736 aa11.7□□□□□ -0.54
PSEN1-221ENST00000557293 ANKHQ9HCJ1 492 aa11.7□□□□□ -0.54
PSEN1-221ENST00000557293 ABCF3Q9NUQ8 709 aa11.7□□□□□ -0.54
PSEN1-221ENST00000557293 ZNF223Q9UK11 482 aaPredicted RBP11.7□□□□□ -0.54
PSEN1-221ENST00000557293 FBN1P35555 2871 aaKnown RBP11.69□□□□□ -0.54
PSEN1-221ENST00000557293 IGKV3D-11A0A0A0MRZ8 115 aa11.69□□□□□ -0.54
PSEN1-221ENST00000557293 A0A1B0GVC2 190 aa11.69□□□□□ -0.54
PSEN1-221ENST00000557293 GFYI3L273 518 aa11.69□□□□□ -0.54
PSEN1-221ENST00000557293 CHST10O43529 356 aa11.69□□□□□ -0.54
PSEN1-221ENST00000557293 LY6G6DO95868 133 aa11.69□□□□□ -0.54
PSEN1-221ENST00000557293 IGHG3P01860 377 aa11.69□□□□□ -0.54
PSEN1-221ENST00000557293 HEXAP06865 529 aa11.69□□□□□ -0.54
PSEN1-221ENST00000557293 FHP07954 510 aa11.69□□□□□ -0.54
PSEN1-221ENST00000557293 NMBRP28336 390 aa11.69□□□□□ -0.54
PSEN1-221ENST00000557293 IMPA1P29218 277 aa11.69□□□□□ -0.54
PSEN1-221ENST00000557293 SKIV2L2P42285 1042 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms