RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 MARCH4Q9P2E8 410 aaPredicted RBP9.43□□□□□ -0.9
HNRNPC-228ENST00000557033 PLCL2Q9UPR0 1127 aa9.43□□□□□ -0.9
HNRNPC-228ENST00000557033 MAN2B2Q9Y2E5 1009 aa9.43□□□□□ -0.9
HNRNPC-228ENST00000557033 TCRBV7S3A2A0A539 114 aa9.42□□□□□ -0.9
HNRNPC-228ENST00000557033 TCRBV5S2A0A599 114 aa9.42□□□□□ -0.9
HNRNPC-228ENST00000557033 SDR42E2A6NKP2 422 aa9.42□□□□□ -0.9
HNRNPC-228ENST00000557033 H3BMH7 237 aa9.42□□□□□ -0.9
HNRNPC-228ENST00000557033 RASGRF2O14827 1237 aa9.42□□□□□ -0.9
HNRNPC-228ENST00000557033 ZSCAN12O43309 604 aa9.42□□□□□ -0.9
HNRNPC-228ENST00000557033 OR2B3O76000 313 aa9.42□□□□□ -0.9
HNRNPC-228ENST00000557033 CNOT4O95628 575 aaKnown RBP9.42□□□□□ -0.9
HNRNPC-228ENST00000557033 F13BP05160 661 aa9.42□□□□□ -0.9
HNRNPC-228ENST00000557033 OGNP20774 298 aaKnown RBP9.42□□□□□ -0.9
HNRNPC-228ENST00000557033 PKLRP30613 574 aa9.42□□□□□ -0.9
HNRNPC-228ENST00000557033 COILP38432 576 aaPredicted RBP9.42□□□□□ -0.9
HNRNPC-228ENST00000557033 CASRP41180 1078 aa9.42□□□□□ -0.9
HNRNPC-228ENST00000557033 KIR2DL2P43627 348 aaPredicted RBP9.42□□□□□ -0.9
HNRNPC-228ENST00000557033 GABRA4P48169 554 aa9.42□□□□□ -0.9
HNRNPC-228ENST00000557033 GRB7Q14451 532 aa9.42□□□□□ -0.9
HNRNPC-228ENST00000557033 TRIP13Q15645 432 aaPredicted RBP9.42□□□□□ -0.9
HNRNPC-228ENST00000557033 ZIC1Q15915 447 aa9.42□□□□□ -0.9
HNRNPC-228ENST00000557033 TYSND1Q2T9J0 566 aa9.42□□□□□ -0.9
HNRNPC-228ENST00000557033 PRAMEF17Q5VTA0 474 aa9.42□□□□□ -0.9
HNRNPC-228ENST00000557033 KIAA0930Q6ICG6 404 aaPredicted RBP9.42□□□□□ -0.9
HNRNPC-228ENST00000557033 TTC27Q6P3X3 843 aa9.42□□□□□ -0.9
HNRNPC-228ENST00000557033 CCDC137Q6PK04 289 aaKnown RBP9.42□□□□□ -0.9
HNRNPC-228ENST00000557033 TMEM135Q86UB9 458 aa9.42□□□□□ -0.9
HNRNPC-228ENST00000557033 DNAJC22Q8N4W6 341 aa9.42□□□□□ -0.9
HNRNPC-228ENST00000557033 RAB42Q8N4Z0 105 aa9.42□□□□□ -0.9
HNRNPC-228ENST00000557033 OR2L8Q8NGY9 312 aa9.42□□□□□ -0.9
HNRNPC-228ENST00000557033 CFAP61Q8NHU2 1237 aa9.42□□□□□ -0.9
HNRNPC-228ENST00000557033 LKAAEAR1Q8TD35 194 aa9.42□□□□□ -0.9
HNRNPC-228ENST00000557033 ACTRT1Q8TDG2 376 aa9.42□□□□□ -0.9
HNRNPC-228ENST00000557033 DENND1AQ8TEH3 1009 aa9.42□□□□□ -0.9
HNRNPC-228ENST00000557033 ZUFSPQ96AP4 578 aa9.42□□□□□ -0.9
HNRNPC-228ENST00000557033 MS4A14Q96JA4 679 aa9.42□□□□□ -0.9
HNRNPC-228ENST00000557033 FOPNLQ96NB1 174 aa9.42□□□□□ -0.9
HNRNPC-228ENST00000557033 BIRC8Q96P09 236 aa9.42□□□□□ -0.9
HNRNPC-228ENST00000557033 RUFY1Q96T51 708 aa9.42□□□□□ -0.9
HNRNPC-228ENST00000557033 RAB11FIP5Q9BXF6 653 aa9.42□□□□□ -0.9
HNRNPC-228ENST00000557033 CLMPQ9H6B4 373 aa9.42□□□□□ -0.9
HNRNPC-228ENST00000557033 XAB2Q9HCS7 855 aaKnown RBP9.42□□□□□ -0.9
HNRNPC-228ENST00000557033 TLK1Q9UKI8 766 aa9.42□□□□□ -0.9
HNRNPC-228ENST00000557033 SLC39A10Q9ULF5 831 aa9.42□□□□□ -0.9
HNRNPC-228ENST00000557033 SNX7Q9UNH6 387 aa9.42□□□□□ -0.9
HNRNPC-228ENST00000557033 PADI2Q9Y2J8 665 aa9.42□□□□□ -0.9
HNRNPC-228ENST00000557033 NEU2Q9Y3R4 380 aa9.42□□□□□ -0.9
HNRNPC-228ENST00000557033 BOD1L1Q8NFC6 3051 aa9.42□□□□□ -0.9
HNRNPC-228ENST00000557033 ZNF462Q96JM2 2506 aa9.41□□□□□ -0.9
HNRNPC-228ENST00000557033 BSNQ9UPA5 3926 aa9.41□□□□□ -0.9
HNRNPC-228ENST00000557033 FAM237BA0A1B0GVD1 139 aa9.41□□□□□ -0.9
HNRNPC-228ENST00000557033 DYTNA2CJ06 578 aa9.41□□□□□ -0.9
HNRNPC-228ENST00000557033 PRSS47A8MTI9 375 aa9.41□□□□□ -0.9
HNRNPC-228ENST00000557033 TARM1B6A8C7 271 aa9.41□□□□□ -0.9
HNRNPC-228ENST00000557033 C9J4A7 227 aa9.41□□□□□ -0.9
HNRNPC-228ENST00000557033 PGRMC1O00264 195 aaKnown RBP9.41□□□□□ -0.9
HNRNPC-228ENST00000557033 CES2O00748 559 aa9.41□□□□□ -0.9
HNRNPC-228ENST00000557033 AVILO75366 819 aa9.41□□□□□ -0.9
HNRNPC-228ENST00000557033 MATN4O95460 622 aa9.41□□□□□ -0.9
HNRNPC-228ENST00000557033 C1orf105O95561 183 aa9.41□□□□□ -0.9
HNRNPC-228ENST00000557033 CAPN1P07384 714 aa9.41□□□□□ -0.9
HNRNPC-228ENST00000557033 DHRS4L1P0CG22 281 aa9.41□□□□□ -0.9
HNRNPC-228ENST00000557033 ATP5DP30049 168 aa9.41□□□□□ -0.9
HNRNPC-228ENST00000557033 PEBP1P30086 187 aaKnown RBP9.41□□□□□ -0.9
HNRNPC-228ENST00000557033 FMO4P31512 558 aa9.41□□□□□ -0.9
HNRNPC-228ENST00000557033 GMPRP36959 345 aa9.41□□□□□ -0.9
HNRNPC-228ENST00000557033 EIF3BP55884 814 aaKnown RBP9.41□□□□□ -0.9
HNRNPC-228ENST00000557033 RPS18P62269 152 aaKnown RBP9.41□□□□□ -0.9
HNRNPC-228ENST00000557033 KLRB1Q12918 225 aa9.41□□□□□ -0.9
HNRNPC-228ENST00000557033 DAG1Q14118 895 aa9.41□□□□□ -0.9
HNRNPC-228ENST00000557033 NCF4Q15080 339 aa9.41□□□□□ -0.9
HNRNPC-228ENST00000557033 LCN10Q6JVE6 187 aa9.41□□□□□ -0.9
HNRNPC-228ENST00000557033 RHBDD2Q6NTF9 364 aa9.41□□□□□ -0.9
HNRNPC-228ENST00000557033 NEPROQ6NW34 567 aa9.41□□□□□ -0.9
HNRNPC-228ENST00000557033 CASC4Q6P4E1 433 aa9.41□□□□□ -0.9
HNRNPC-228ENST00000557033 CES3Q6UWW8 571 aa9.41□□□□□ -0.9
HNRNPC-228ENST00000557033 MED25Q71SY5 747 aa9.41□□□□□ -0.9
HNRNPC-228ENST00000557033 TRIM73Q86UV7 250 aa9.41□□□□□ -0.9
HNRNPC-228ENST00000557033 CAND1Q86VP6 1230 aaKnown RBP9.41□□□□□ -0.9
HNRNPC-228ENST00000557033 LIX1LQ8IVB5 337 aa9.41□□□□□ -0.9
HNRNPC-228ENST00000557033 LMNTD2Q8IXW0 634 aa9.41□□□□□ -0.9
HNRNPC-228ENST00000557033 OTUD6BQ8N6M0 293 aa9.41□□□□□ -0.9
HNRNPC-228ENST00000557033 ENDOVQ8N8Q3 282 aaKnown RBP9.41□□□□□ -0.9
HNRNPC-228ENST00000557033 LINC01555Q8NAE3 123 aa9.41□□□□□ -0.9
HNRNPC-228ENST00000557033 HMGCLL1Q8TB92 370 aa9.41□□□□□ -0.9
HNRNPC-228ENST00000557033 PROKR1Q8TCW9 393 aa9.41□□□□□ -0.9
HNRNPC-228ENST00000557033 ADAMTS17Q8TE56 1095 aa9.41□□□□□ -0.9
HNRNPC-228ENST00000557033 GRK7Q8WTQ7 553 aa9.41□□□□□ -0.9
HNRNPC-228ENST00000557033 LPGAT1Q92604 370 aa9.41□□□□□ -0.9
HNRNPC-228ENST00000557033 UBXN10Q96LJ8 280 aa9.41□□□□□ -0.9
HNRNPC-228ENST00000557033 SPRTNQ9H040 489 aaPredicted RBP9.41□□□□□ -0.9
HNRNPC-228ENST00000557033 MLXIPLQ9NP71 852 aa9.41□□□□□ -0.9
HNRNPC-228ENST00000557033 INTS10Q9NVR2 710 aaKnown RBP9.41□□□□□ -0.9
HNRNPC-228ENST00000557033 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.41□□□□□ -0.9
HNRNPC-228ENST00000557033 PLAGL1Q9UM63 463 aa9.41□□□□□ -0.9
HNRNPC-228ENST00000557033 TP53TG5Q9Y2B4 290 aa9.41□□□□□ -0.9
HNRNPC-228ENST00000557033 HELZ2Q9BYK8 2649 aaKnown RBP9.4□□□□□ -0.9
HNRNPC-228ENST00000557033 GOLGA6L10A0A0M3HER8 536 aa9.4□□□□□ -0.9
HNRNPC-228ENST00000557033 ZSCAN9O15535 394 aaPredicted RBP9.4□□□□□ -0.9
HNRNPC-228ENST00000557033 HCRTR1O43613 425 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms