RNA–Protein interactions for RNA: ENST00000556814.5

FCF1-208, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-208ENST00000556814 MTHFD2LQ9H903 347 aaPredicted RBP3.57□□□□□ -1.84
FCF1-208ENST00000556814 RAB9BQ9NP90 201 aa3.57□□□□□ -1.84
FCF1-208ENST00000556814 EXOC1Q9NV70 894 aa3.57□□□□□ -1.84
FCF1-208ENST00000556814 FBXL4Q9UKA2 621 aa3.57□□□□□ -1.84
FCF1-208ENST00000556814 RUVBL2Q9Y230 463 aaKnown RBP3.57□□□□□ -1.84
FCF1-208ENST00000556814 LIPT1Q9Y234 373 aa3.57□□□□□ -1.84
FCF1-208ENST00000556814 SNX5Q9Y5X3 404 aa3.57□□□□□ -1.84
FCF1-208ENST00000556814 CSNK1G3Q9Y6M4 447 aa3.57□□□□□ -1.84
FCF1-208ENST00000556814 TRAV18A0A075B6X5 111 aa3.56□□□□□ -1.84
FCF1-208ENST00000556814 A0A0J9YWU9 116 aa3.56□□□□□ -1.84
FCF1-208ENST00000556814 TRIM64A6NGJ6 449 aa3.56□□□□□ -1.84
FCF1-208ENST00000556814 OOEPA6NGQ2 149 aa3.56□□□□□ -1.84
FCF1-208ENST00000556814 TRIM64BA6NI03 449 aa3.56□□□□□ -1.84
FCF1-208ENST00000556814 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.56□□□□□ -1.84
FCF1-208ENST00000556814 NPIPA3F8WFD2 350 aa3.56□□□□□ -1.84
FCF1-208ENST00000556814 CCL24O00175 119 aa3.56□□□□□ -1.84
FCF1-208ENST00000556814 NTN3O00634 580 aaPredicted RBP3.56□□□□□ -1.84
FCF1-208ENST00000556814 SLC30A4O14863 429 aa3.56□□□□□ -1.84
FCF1-208ENST00000556814 CYTIPO60759 359 aa3.56□□□□□ -1.84
FCF1-208ENST00000556814 CEACAM4O75871 244 aa3.56□□□□□ -1.84
FCF1-208ENST00000556814 MOCS2O96007 188 aaPredicted RBP3.56□□□□□ -1.84
FCF1-208ENST00000556814 CD59P13987 128 aa3.56□□□□□ -1.84
FCF1-208ENST00000556814 ATP6V1B1P15313 513 aa3.56□□□□□ -1.84
FCF1-208ENST00000556814 PRKACGP22612 351 aa3.56□□□□□ -1.84
FCF1-208ENST00000556814 PSMB4P28070 264 aa3.56□□□□□ -1.84
FCF1-208ENST00000556814 TIA1P31483 386 aaKnown RBP eCLIP3.56□□□□□ -1.84
FCF1-208ENST00000556814 SOX3P41225 446 aa3.56□□□□□ -1.84
FCF1-208ENST00000556814 HNF4AP41235 474 aa3.56□□□□□ -1.84
FCF1-208ENST00000556814 CLDN17P56750 224 aa3.56□□□□□ -1.84
FCF1-208ENST00000556814 GSCP56915 257 aaPredicted RBP3.56□□□□□ -1.84
FCF1-208ENST00000556814 C17orf67Q0P5P2 114 aa3.56□□□□□ -1.84
FCF1-208ENST00000556814 RCN2Q14257 317 aa3.56□□□□□ -1.84
FCF1-208ENST00000556814 FASTKD1Q53R41 847 aaKnown RBP3.56□□□□□ -1.84
FCF1-208ENST00000556814 ODF2Q5BJF6 829 aa3.56□□□□□ -1.84
FCF1-208ENST00000556814 CCDC158Q5M9N0 1113 aa3.56□□□□□ -1.84
FCF1-208ENST00000556814 METTL7BQ6UX53 244 aa3.56□□□□□ -1.84
FCF1-208ENST00000556814 LINC00696Q6ZRV3 163 aa3.56□□□□□ -1.84
FCF1-208ENST00000556814 ZER1Q7Z7L7 766 aa3.56□□□□□ -1.84
FCF1-208ENST00000556814 PRUNE1Q86TP1 453 aa3.56□□□□□ -1.84
FCF1-208ENST00000556814 CARNMT1Q8N4J0 409 aa3.56□□□□□ -1.84
FCF1-208ENST00000556814 NAT8LQ8N9F0 302 aa3.56□□□□□ -1.84
FCF1-208ENST00000556814 RIT1Q92963 219 aa3.56□□□□□ -1.84
FCF1-208ENST00000556814 TEKT1Q969V4 418 aa3.56□□□□□ -1.84
FCF1-208ENST00000556814 PARK7Q99497 189 aaKnown RBP3.56□□□□□ -1.84
FCF1-208ENST00000556814 PIGQQ9BRB3 760 aa3.56□□□□□ -1.84
FCF1-208ENST00000556814 CACNG6Q9BXT2 260 aa3.56□□□□□ -1.84
FCF1-208ENST00000556814 NACAP1Q9BZK3 213 aa3.56□□□□□ -1.84
FCF1-208ENST00000556814 TRIM15Q9C019 465 aa3.56□□□□□ -1.84
FCF1-208ENST00000556814 UPF3AQ9H1J1 476 aaKnown RBP3.56□□□□□ -1.84
FCF1-208ENST00000556814 C10orf88Q9H8K7 445 aa3.56□□□□□ -1.84
FCF1-208ENST00000556814 TUFT1Q9NNX1 390 aa3.56□□□□□ -1.84
FCF1-208ENST00000556814 SPHK2Q9NRA0 654 aa3.56□□□□□ -1.84
FCF1-208ENST00000556814 PANK4Q9NVE7 773 aa3.56□□□□□ -1.84
FCF1-208ENST00000556814 TEX10Q9NXF1 929 aaPredicted RBP3.56□□□□□ -1.84
FCF1-208ENST00000556814 HACD3Q9P035 362 aa3.56□□□□□ -1.84
FCF1-208ENST00000556814 LNPEPQ9UIQ6 1025 aa3.56□□□□□ -1.84
FCF1-208ENST00000556814 AGTPBP1Q9UPW5 1226 aa3.56□□□□□ -1.84
FCF1-208ENST00000556814 SNED1Q8TER0 1413 aa3.55□□□□□ -1.84
FCF1-208ENST00000556814 HEG1Q9ULI3 1381 aa3.55□□□□□ -1.84
FCF1-208ENST00000556814 A0A0U1RQG5 324 aaPredicted RBP3.55□□□□□ -1.84
FCF1-208ENST00000556814 EEF2P13639 858 aaKnown RBP3.55□□□□□ -1.84
FCF1-208ENST00000556814 RBMS1P29558 406 aaKnown RBP3.55□□□□□ -1.84
FCF1-208ENST00000556814 OR3A3P47888 321 aa3.55□□□□□ -1.84
FCF1-208ENST00000556814 KRTAP10-12P60413 245 aa3.55□□□□□ -1.84
FCF1-208ENST00000556814 FASTKD3Q14CZ7 662 aaKnown RBP3.55□□□□□ -1.84
FCF1-208ENST00000556814 SMU1Q2TAY7 513 aa3.55□□□□□ -1.84
FCF1-208ENST00000556814 GLRA4Q5JXX5 417 aa3.55□□□□□ -1.84
FCF1-208ENST00000556814 CASC4Q6P4E1 433 aa3.55□□□□□ -1.84
FCF1-208ENST00000556814 KIF6Q6ZMV9 814 aa3.55□□□□□ -1.84
FCF1-208ENST00000556814 MACC1Q6ZN28 852 aa3.55□□□□□ -1.84
FCF1-208ENST00000556814 Q6ZRP5 223 aa3.55□□□□□ -1.84
FCF1-208ENST00000556814 APCDD1Q8J025 514 aa3.55□□□□□ -1.84
FCF1-208ENST00000556814 C10orf53Q8N6V4 93 aa3.55□□□□□ -1.84
FCF1-208ENST00000556814 TCEANCQ8N8B7 351 aa3.55□□□□□ -1.84
FCF1-208ENST00000556814 MGARPQ8TDB4 240 aa3.55□□□□□ -1.84
FCF1-208ENST00000556814 HNRNPABQ99729 332 aaKnown RBP3.55□□□□□ -1.84
FCF1-208ENST00000556814 UBQLN3Q9H347 655 aa3.55□□□□□ -1.84
FCF1-208ENST00000556814 TMEM206Q9H813 350 aa3.55□□□□□ -1.84
FCF1-208ENST00000556814 RPF1Q9H9Y2 349 aaKnown RBP3.55□□□□□ -1.84
FCF1-208ENST00000556814 B3GAT2Q9NPZ5 323 aa3.55□□□□□ -1.84
FCF1-208ENST00000556814 IARS2Q9NSE4 1012 aaKnown RBP3.55□□□□□ -1.84
FCF1-208ENST00000556814 PDRG1Q9NUG6 133 aa3.55□□□□□ -1.84
FCF1-208ENST00000556814 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.55□□□□□ -1.84
FCF1-208ENST00000556814 CNIH4Q9P003 139 aa3.55□□□□□ -1.84
FCF1-208ENST00000556814 PILRBQ9UKJ0 227 aa3.55□□□□□ -1.84
FCF1-208ENST00000556814 WIPI2Q9Y4P8 454 aa3.55□□□□□ -1.84
FCF1-208ENST00000556814 IQCMA0A1B0GVH7 501 aa3.54□□□□□ -1.84
FCF1-208ENST00000556814 NKX6-3A6NJ46 265 aa3.54□□□□□ -1.84
FCF1-208ENST00000556814 MPTX1A8MV57 137 aa3.54□□□□□ -1.84
FCF1-208ENST00000556814 SLC33A1O00400 549 aaPredicted RBP3.54□□□□□ -1.84
FCF1-208ENST00000556814 ZNF263O14978 683 aa3.54□□□□□ -1.84
FCF1-208ENST00000556814 SURF4O15260 269 aa3.54□□□□□ -1.84
FCF1-208ENST00000556814 DUS4LO95620 317 aaKnown RBP3.54□□□□□ -1.84
FCF1-208ENST00000556814 ITIH1P19827 911 aa3.54□□□□□ -1.84
FCF1-208ENST00000556814 UGT1A4P22310 534 aa3.54□□□□□ -1.84
FCF1-208ENST00000556814 CCND3P30281 292 aaPredicted RBP3.54□□□□□ -1.84
FCF1-208ENST00000556814 SSTR1P30872 391 aa3.54□□□□□ -1.84
FCF1-208ENST00000556814 TMEM50BP56557 158 aa3.54□□□□□ -1.84
FCF1-208ENST00000556814 OR1D5P58170 312 aa3.54□□□□□ -1.84
FCF1-208ENST00000556814 ASIC1P78348 528 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms