RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 POLE2P56282 527 aa17.55■□□□□ 0.4
SDR39U1-220ENST00000556548 CTBSQ01459 385 aa17.55■□□□□ 0.4
SDR39U1-220ENST00000556548 C2orf80Q0P641 193 aa17.55■□□□□ 0.4
SDR39U1-220ENST00000556548 SMAD4Q13485 552 aaKnown RBP17.55■□□□□ 0.4
SDR39U1-220ENST00000556548 NFATC4Q14934 902 aa17.55■□□□□ 0.4
SDR39U1-220ENST00000556548 FBXO43Q4G163 708 aa17.55■□□□□ 0.4
SDR39U1-220ENST00000556548 ENPP6Q6UWR7 440 aa17.55■□□□□ 0.4
SDR39U1-220ENST00000556548 ZBTB49Q6ZSB9 765 aa17.55■□□□□ 0.4
SDR39U1-220ENST00000556548 OR10Q1Q8NGQ4 319 aa17.55■□□□□ 0.4
SDR39U1-220ENST00000556548 DNAJB8Q8NHS0 232 aa17.55■□□□□ 0.4
SDR39U1-220ENST00000556548 C16orf78Q8WTQ4 265 aa17.55■□□□□ 0.4
SDR39U1-220ENST00000556548 CHID1Q9BWS9 393 aa17.55■□□□□ 0.4
SDR39U1-220ENST00000556548 PHF7Q9BWX1 381 aaPredicted RBP17.55■□□□□ 0.4
SDR39U1-220ENST00000556548 TMEM168Q9H0V1 697 aa17.55■□□□□ 0.4
SDR39U1-220ENST00000556548 C6orf106Q9H6K1 298 aaPredicted RBP17.55■□□□□ 0.4
SDR39U1-220ENST00000556548 SPASTQ9UBP0 616 aa17.55■□□□□ 0.4
SDR39U1-220ENST00000556548 CYP8B1Q9UNU6 501 aa17.55■□□□□ 0.4
SDR39U1-220ENST00000556548 ICKQ9UPZ9 632 aa17.55■□□□□ 0.4
SDR39U1-220ENST00000556548 IGKV1-8A0A0C4DH67 115 aa17.55■□□□□ 0.4
SDR39U1-220ENST00000556548 C7orf72A4D263 438 aa17.55■□□□□ 0.4
SDR39U1-220ENST00000556548 CLIC1O00299 241 aa17.55■□□□□ 0.4
SDR39U1-220ENST00000556548 LCMT2O60294 686 aaKnown RBP17.55■□□□□ 0.4
SDR39U1-220ENST00000556548 GALNT18Q6P9A2 607 aa17.55■□□□□ 0.4
SDR39U1-220ENST00000556548 MICU2Q8IYU8 434 aa17.55■□□□□ 0.4
SDR39U1-220ENST00000556548 METTL4Q8N3J2 472 aa17.55■□□□□ 0.4
SDR39U1-220ENST00000556548 GATA6Q92908 595 aa17.55■□□□□ 0.4
SDR39U1-220ENST00000556548 SCARF2Q96GP6 870 aaPredicted RBP17.55■□□□□ 0.4
SDR39U1-220ENST00000556548 WDR92Q96MX6 357 aa17.55■□□□□ 0.4
SDR39U1-220ENST00000556548 GAS2L1Q99501 681 aaPredicted RBP17.55■□□□□ 0.4
SDR39U1-220ENST00000556548 VCXQ9H320 206 aa17.55■□□□□ 0.4
SDR39U1-220ENST00000556548 PELI2Q9HAT8 420 aa17.55■□□□□ 0.4
SDR39U1-220ENST00000556548 FAM120CQ9NX05 1096 aaKnown RBP17.55■□□□□ 0.4
SDR39U1-220ENST00000556548 PCDHGB4Q9UN71 923 aa17.55■□□□□ 0.4
SDR39U1-220ENST00000556548 PCDHGB5Q9Y5G0 923 aa17.55■□□□□ 0.4
SDR39U1-220ENST00000556548 AP4B1Q9Y6B7 739 aa17.55■□□□□ 0.4
SDR39U1-220ENST00000556548 A0A1B0GVG6 124 aa17.54■□□□□ 0.4
SDR39U1-220ENST00000556548 SEMA4FO95754 770 aa17.54■□□□□ 0.4
SDR39U1-220ENST00000556548 BMP2P12643 396 aa17.54■□□□□ 0.4
SDR39U1-220ENST00000556548 GZMMP51124 257 aa17.54■□□□□ 0.4
SDR39U1-220ENST00000556548 GK3PQ14409 553 aa17.54■□□□□ 0.4
SDR39U1-220ENST00000556548 TRIM69Q86WT6 500 aa17.54■□□□□ 0.4
SDR39U1-220ENST00000556548 GOLM1Q8NBJ4 401 aa17.54■□□□□ 0.4
SDR39U1-220ENST00000556548 OR2A1Q8NGT9 310 aa17.54■□□□□ 0.4
SDR39U1-220ENST00000556548 NETO1Q8TDF5 533 aa17.54■□□□□ 0.4
SDR39U1-220ENST00000556548 CIDECQ96AQ7 238 aaPredicted RBP17.54■□□□□ 0.4
SDR39U1-220ENST00000556548 CNBD2Q96M20 576 aa17.54■□□□□ 0.4
SDR39U1-220ENST00000556548 BTBD9Q96Q07 612 aa17.54■□□□□ 0.4
SDR39U1-220ENST00000556548 MACROD1Q9BQ69 325 aa17.54■□□□□ 0.4
SDR39U1-220ENST00000556548 PCBD2Q9H0N5 130 aa17.54■□□□□ 0.4
SDR39U1-220ENST00000556548 WASH6PQ9NQA3 447 aa17.54■□□□□ 0.4
SDR39U1-220ENST00000556548 SPHK1Q9NYA1 384 aa17.54■□□□□ 0.4
SDR39U1-220ENST00000556548 DLGAP2Q9P1A6 1054 aa17.54■□□□□ 0.4
SDR39U1-220ENST00000556548 CA14Q9ULX7 337 aa17.54■□□□□ 0.4
SDR39U1-220ENST00000556548 KLHL20Q9Y2M5 609 aa17.54■□□□□ 0.4
SDR39U1-220ENST00000556548 EVPLLA8MZ36 301 aa17.54■□□□□ 0.4
SDR39U1-220ENST00000556548 PLPP1O14494 284 aa17.54■□□□□ 0.4
SDR39U1-220ENST00000556548 MAP3K13O43283 966 aa17.54■□□□□ 0.4
SDR39U1-220ENST00000556548 UMPSP11172 480 aa17.54■□□□□ 0.4
SDR39U1-220ENST00000556548 HTR1BP28222 390 aa17.54■□□□□ 0.4
SDR39U1-220ENST00000556548 PKLRP30613 574 aa17.54■□□□□ 0.4
SDR39U1-220ENST00000556548 ACTR1BP42025 376 aa17.54■□□□□ 0.4
SDR39U1-220ENST00000556548 TRPC1P48995 793 aa17.54■□□□□ 0.4
SDR39U1-220ENST00000556548 CASP9P55211 416 aa17.54■□□□□ 0.4
SDR39U1-220ENST00000556548 KIAA1024LP59773 190 aa17.54■□□□□ 0.4
SDR39U1-220ENST00000556548 ACTR1AP61163 376 aa17.54■□□□□ 0.4
SDR39U1-220ENST00000556548 SFSWAPQ12872 951 aaKnown RBP17.54■□□□□ 0.4
SDR39U1-220ENST00000556548 PDK3Q15120 406 aa17.54■□□□□ 0.4
SDR39U1-220ENST00000556548 MSANTD1Q6ZTZ1 278 aa17.54■□□□□ 0.4
SDR39U1-220ENST00000556548 CALHM3Q86XJ0 350 aa17.54■□□□□ 0.4
SDR39U1-220ENST00000556548 ANKFN1Q8N957 763 aa17.54■□□□□ 0.4
SDR39U1-220ENST00000556548 ABHD11Q8NFV4 315 aa17.54■□□□□ 0.4
SDR39U1-220ENST00000556548 ASB12Q8WXK4 309 aa17.54■□□□□ 0.4
SDR39U1-220ENST00000556548 CCDC115Q96NT0 180 aa17.54■□□□□ 0.4
SDR39U1-220ENST00000556548 PRPF18Q99633 342 aaKnown RBP17.54■□□□□ 0.4
SDR39U1-220ENST00000556548 DPH2Q9BQC3 489 aaPredicted RBP17.54■□□□□ 0.4
SDR39U1-220ENST00000556548 REEP4Q9H6H4 257 aa17.54■□□□□ 0.4
SDR39U1-220ENST00000556548 UTS2RQ9UKP6 389 aa17.54■□□□□ 0.4
SDR39U1-220ENST00000556548 A0A0G2JN53 185 aa17.53■□□□□ 0.4
SDR39U1-220ENST00000556548 EPN2O95208 641 aa17.53■□□□□ 0.4
SDR39U1-220ENST00000556548 NTRK1P04629 796 aa17.53■□□□□ 0.4
SDR39U1-220ENST00000556548 LYNP07948 512 aa17.53■□□□□ 0.4
SDR39U1-220ENST00000556548 IL3P08700 152 aa17.53■□□□□ 0.4
SDR39U1-220ENST00000556548 HOXB3P14651 431 aaPredicted RBP17.53■□□□□ 0.4
SDR39U1-220ENST00000556548 C21orf58P58505 322 aa17.53■□□□□ 0.4
SDR39U1-220ENST00000556548 CSNK1G2P78368 415 aa17.53■□□□□ 0.4
SDR39U1-220ENST00000556548 PRDX1Q06830 199 aaKnown RBP17.53■□□□□ 0.4
SDR39U1-220ENST00000556548 PRSS53Q2L4Q9 553 aa17.53■□□□□ 0.4
SDR39U1-220ENST00000556548 C10orf62Q5T681 223 aaPredicted RBP17.53■□□□□ 0.4
SDR39U1-220ENST00000556548 IRAK1BP1Q5VVH5 260 aa17.53■□□□□ 0.4
SDR39U1-220ENST00000556548 ZCCHC8Q6NZY4 707 aaKnown RBP17.53■□□□□ 0.4
SDR39U1-220ENST00000556548 SLC9B2Q86UD5 537 aa17.53■□□□□ 0.4
SDR39U1-220ENST00000556548 EPHX4Q8IUS5 362 aa17.53■□□□□ 0.4
SDR39U1-220ENST00000556548 CBR4Q8N4T8 237 aa17.53■□□□□ 0.4
SDR39U1-220ENST00000556548 TNIP2Q8NFZ5 429 aa17.53■□□□□ 0.4
SDR39U1-220ENST00000556548 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.53■□□□□ 0.47e-8■■■■□ 21.2
SDR39U1-220ENST00000556548 GORASP2Q9H8Y8 452 aa17.53■□□□□ 0.4
SDR39U1-220ENST00000556548 OAZ3Q9UMX2 235 aa17.53■□□□□ 0.4
SDR39U1-220ENST00000556548 FAM220BPB1ANY3 271 aa17.53■□□□□ 0.4
SDR39U1-220ENST00000556548 ZSCAN9O15535 394 aaPredicted RBP17.53■□□□□ 0.4
SDR39U1-220ENST00000556548 PCSK2P16519 638 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms