RNA–Protein interactions for RNA: ENST00000556479.5

LINC00640-203, long intergenic non-protein coding RNA 640, humanhuman

TSL 2 BASIC

Gene LINC00640, Length 576 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-203ENST00000556479 GDF3Q9NR23 364 aa3.48□□□□□ -1.85
LINC00640-203ENST00000556479 SDR39U1Q9NRG7 319 aaPredicted RBP3.48□□□□□ -1.85
LINC00640-203ENST00000556479 IL17BQ9UHF5 180 aa3.48□□□□□ -1.85
LINC00640-203ENST00000556479 DDX25Q9UHL0 483 aaKnown RBP3.48□□□□□ -1.85
LINC00640-203ENST00000556479 KCNJ14Q9UNX9 436 aa3.48□□□□□ -1.85
LINC00640-203ENST00000556479 TTLL3Q9Y4R7 772 aa3.48□□□□□ -1.85
LINC00640-203ENST00000556479 TRPV2Q9Y5S1 764 aa3.48□□□□□ -1.85
LINC00640-203ENST00000556479 KDM3BQ7LBC6 1761 aa3.48□□□□□ -1.85
LINC00640-203ENST00000556479 C4AP0C0L4 1744 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 C4BP0C0L5 1744 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 NALCNQ8IZF0 1738 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 UBN2Q6ZU65 1347 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 PCDH11YQ9BZA8 1340 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 IGHV4-61A0A0C4DH41 118 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 LOC101059948A0A1B0GTJ6 334 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 A0A1W2PPQ1 181 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 ZNF233A6NK53 670 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 LIN7AO14910 233 aaPredicted RBP3.47□□□□□ -1.85
LINC00640-203ENST00000556479 ATP6V0E1O15342 81 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 GPAA1O43292 621 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 SPRY1O43609 319 aaPredicted RBP3.47□□□□□ -1.85
LINC00640-203ENST00000556479 TRAPPC3O43617 180 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 EDIL3O43854 480 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 CIAO1O76071 339 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 NGFP01138 241 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 IGHV4-59P01825 116 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 KRT14P02533 472 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 NEFHP12036 1026 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 CASP1P29466 404 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 CTNNA1P35221 906 aaKnown RBP3.47□□□□□ -1.85
LINC00640-203ENST00000556479 HSPA9P38646 679 aaKnown RBP3.47□□□□□ -1.85
LINC00640-203ENST00000556479 CCNHP51946 323 aaPredicted RBP3.47□□□□□ -1.85
LINC00640-203ENST00000556479 UBXN2AP68543 259 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 MAT1AQ00266 395 aaKnown RBP3.47□□□□□ -1.85
LINC00640-203ENST00000556479 ITGB3BPQ13352 177 aaPredicted RBP3.47□□□□□ -1.85
LINC00640-203ENST00000556479 CUL1Q13616 776 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 ALCAMQ13740 583 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 ALX1Q15699 326 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 CCDC57Q2TAC2 916 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 CRY2Q49AN0 593 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 PHLDA2Q53GA4 152 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 SPDYCQ5MJ68 293 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 OTUD3Q5T2D3 398 aaPredicted RBP3.47□□□□□ -1.85
LINC00640-203ENST00000556479 ARHGAP11AQ6P4F7 1023 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 WDR59Q6PJI9 974 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 CROCCP2Q86T23 111 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 FAM228AQ86W67 206 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 ZNF383Q8NA42 475 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 POMGNT2Q8NAT1 580 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 NPEPL1Q8NDH3 523 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 CCDC26Q8TAB7 109 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 SLAMF9Q96A28 289 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 NXNL1Q96CM4 212 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 THOC1Q96FV9 657 aaKnown RBP3.47□□□□□ -1.85
LINC00640-203ENST00000556479 LINC00615Q96LM1 132 aaPredicted RBP3.47□□□□□ -1.85
LINC00640-203ENST00000556479 FAM210AQ96ND0 272 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 ANKRD27Q96NW4 1050 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 KRT12Q99456 494 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 TUBGCP2Q9BSJ2 902 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 NACAP1Q9BZK3 213 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 EDEM3Q9BZQ6 932 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 NOL11Q9H8H0 719 aaKnown RBP3.47□□□□□ -1.85
LINC00640-203ENST00000556479 SCRT2Q9NQ03 307 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 CWC25Q9NXE8 425 aaPredicted RBP3.47□□□□□ -1.85
LINC00640-203ENST00000556479 FAM153AQ9UHL3 310 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 ZDHHC2Q9UIJ5 367 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 TFR2Q9UP52 801 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 C15orf41Q9Y2V0 281 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 SLIT1O75093 1534 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 MRC1P22897 1456 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 NEO1Q92859 1461 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 SPEF2Q9C093 1822 aa3.47□□□□□ -1.85
LINC00640-203ENST00000556479 SMCHD1A6NHR9 2005 aa3.46□□□□□ -1.86
LINC00640-203ENST00000556479 LRRD1A4D1F6 860 aa3.46□□□□□ -1.86
LINC00640-203ENST00000556479 SYNDIG1LA6NDD5 238 aa3.46□□□□□ -1.86
LINC00640-203ENST00000556479 HHLA1C9JL84 531 aa3.46□□□□□ -1.86
LINC00640-203ENST00000556479 PTGESO14684 152 aa3.46□□□□□ -1.86
LINC00640-203ENST00000556479 CLIC2O15247 247 aa3.46□□□□□ -1.86
LINC00640-203ENST00000556479 P4HA2O15460 535 aa3.46□□□□□ -1.86
LINC00640-203ENST00000556479 RANBP6O60518 1105 aaKnown RBP3.46□□□□□ -1.86
LINC00640-203ENST00000556479 ZG16O60844 167 aa3.46□□□□□ -1.86
LINC00640-203ENST00000556479 SMIM24O75264 130 aa3.46□□□□□ -1.86
LINC00640-203ENST00000556479 FLOT1O75955 427 aa3.46□□□□□ -1.86
LINC00640-203ENST00000556479 TRUB2O95900 331 aaKnown RBP3.46□□□□□ -1.86
LINC00640-203ENST00000556479 CLPTM1O96005 669 aa3.46□□□□□ -1.86
LINC00640-203ENST00000556479 IGHV2-70P01814 119 aa3.46□□□□□ -1.86
LINC00640-203ENST00000556479 VIMP08670 466 aaKnown RBP3.46□□□□□ -1.86
LINC00640-203ENST00000556479 UQCRFS1P1P0C7P4 283 aa3.46□□□□□ -1.86
LINC00640-203ENST00000556479 PLA2G4BP0C869 781 aa3.46□□□□□ -1.86
LINC00640-203ENST00000556479 NQO1P15559 274 aaKnown RBP3.46□□□□□ -1.86
LINC00640-203ENST00000556479 FERP16591 822 aa3.46□□□□□ -1.86
LINC00640-203ENST00000556479 CCNE1P24864 410 aa3.46□□□□□ -1.86
LINC00640-203ENST00000556479 TMOD1P28289 359 aa3.46□□□□□ -1.86
LINC00640-203ENST00000556479 LONP1P36776 959 aaKnown RBP3.46□□□□□ -1.86
LINC00640-203ENST00000556479 PEX19P40855 299 aa3.46□□□□□ -1.86
LINC00640-203ENST00000556479 MRPS25P82663 173 aaKnown RBP3.46□□□□□ -1.86
LINC00640-203ENST00000556479 PRKCZQ05513 592 aa3.46□□□□□ -1.86
LINC00640-203ENST00000556479 HSPB3Q12988 150 aa3.46□□□□□ -1.86
LINC00640-203ENST00000556479 ITIH4Q14624 930 aa3.46□□□□□ -1.86
LINC00640-203ENST00000556479 RPS6KA1Q15418 735 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms