RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 VWA2Q5GFL6 755 aa10.94□□□□□ -0.66
SLIRP-205ENST00000556310 DCAF10Q5QP82 559 aa10.94□□□□□ -0.66
SLIRP-205ENST00000556310 LRRC70Q7Z2Q7 622 aa10.94□□□□□ -0.66
SLIRP-205ENST00000556310 ISCA2Q86U28 154 aa10.94□□□□□ -0.66
SLIRP-205ENST00000556310 ZC3H7AQ8IWR0 971 aaKnown RBP10.94□□□□□ -0.66
SLIRP-205ENST00000556310 CLEC1AQ8NC01 280 aa10.94□□□□□ -0.66
SLIRP-205ENST00000556310 ZNF740Q8NDX6 193 aa10.94□□□□□ -0.66
SLIRP-205ENST00000556310 OR9A4Q8NGU2 314 aa10.94□□□□□ -0.66
SLIRP-205ENST00000556310 ZCCHC10Q8TBK6 192 aa10.94□□□□□ -0.66
SLIRP-205ENST00000556310 EXT2Q93063 718 aa10.94□□□□□ -0.66
SLIRP-205ENST00000556310 ISL2Q96A47 359 aa10.94□□□□□ -0.66
SLIRP-205ENST00000556310 VPS50Q96JG6 964 aa10.94□□□□□ -0.66
SLIRP-205ENST00000556310 ATOH8Q96SQ7 321 aa10.94□□□□□ -0.66
SLIRP-205ENST00000556310 PAFAH2Q99487 392 aa10.94□□□□□ -0.66
SLIRP-205ENST00000556310 MACROD1Q9BQ69 325 aa10.94□□□□□ -0.66
SLIRP-205ENST00000556310 RHOXF2Q9BQY4 288 aa10.94□□□□□ -0.66
SLIRP-205ENST00000556310 CAPS2Q9BXY5 557 aa10.94□□□□□ -0.66
SLIRP-205ENST00000556310 TGIF2Q9GZN2 237 aa10.94□□□□□ -0.66
SLIRP-205ENST00000556310 ANKHQ9HCJ1 492 aa10.94□□□□□ -0.66
SLIRP-205ENST00000556310 MLXIPLQ9NP71 852 aa10.94□□□□□ -0.66
SLIRP-205ENST00000556310 DNAJC11Q9NVH1 559 aa10.94□□□□□ -0.66
SLIRP-205ENST00000556310 GPRC5BQ9NZH0 403 aa10.94□□□□□ -0.66
SLIRP-205ENST00000556310 ZFP69BQ9UJL9 534 aa10.94□□□□□ -0.66
SLIRP-205ENST00000556310 C3orf18Q9UK00 162 aa10.94□□□□□ -0.66
SLIRP-205ENST00000556310 FBXL4Q9UKA2 621 aa10.94□□□□□ -0.66
SLIRP-205ENST00000556310 PCDHGB7Q9Y5F8 929 aa10.94□□□□□ -0.66
SLIRP-205ENST00000556310 SLC22A7Q9Y694 548 aa10.94□□□□□ -0.66
SLIRP-205ENST00000556310 IKBKGQ9Y6K9 419 aa10.94□□□□□ -0.66
SLIRP-205ENST00000556310 MYO18BQ8IUG5 2567 aa10.93□□□□□ -0.66
SLIRP-205ENST00000556310 A0A096LPK6 155 aa10.93□□□□□ -0.66
SLIRP-205ENST00000556310 SYCE1LA8MT33 242 aa10.93□□□□□ -0.66
SLIRP-205ENST00000556310 K7EM74 188 aa10.93□□□□□ -0.66
SLIRP-205ENST00000556310 FFAR3O14843 346 aa10.93□□□□□ -0.66
SLIRP-205ENST00000556310 PCDH17O14917 1159 aa10.93□□□□□ -0.66
SLIRP-205ENST00000556310 GPR42O15529 346 aa10.93□□□□□ -0.66
SLIRP-205ENST00000556310 SUV39H1O43463 412 aa10.93□□□□□ -0.66
SLIRP-205ENST00000556310 SLC28A2O43868 658 aa10.93□□□□□ -0.66
SLIRP-205ENST00000556310 STK16O75716 305 aa10.93□□□□□ -0.66
SLIRP-205ENST00000556310 KRT38O76015 456 aa10.93□□□□□ -0.66
SLIRP-205ENST00000556310 PDGFAP04085 211 aa10.93□□□□□ -0.66
SLIRP-205ENST00000556310 PLA2G2AP14555 144 aa10.93□□□□□ -0.66
SLIRP-205ENST00000556310 CXCR2P25025 360 aa10.93□□□□□ -0.66
SLIRP-205ENST00000556310 CNTFP26441 200 aa10.93□□□□□ -0.66
SLIRP-205ENST00000556310 MAGEA12P43365 314 aa10.93□□□□□ -0.66
SLIRP-205ENST00000556310 HSPA7P48741 367 aa10.93□□□□□ -0.66
SLIRP-205ENST00000556310 SKP1P63208 163 aa10.93□□□□□ -0.66
SLIRP-205ENST00000556310 IRF9Q00978 393 aa10.93□□□□□ -0.66
SLIRP-205ENST00000556310 RGS1Q08116 209 aa10.93□□□□□ -0.66
SLIRP-205ENST00000556310 HERC3Q15034 1050 aa10.93□□□□□ -0.66
SLIRP-205ENST00000556310 TUBB8Q3ZCM7 444 aa10.93□□□□□ -0.66
SLIRP-205ENST00000556310 ATG9BQ674R7 924 aa10.93□□□□□ -0.66
SLIRP-205ENST00000556310 KIRREL2Q6UWL6 708 aa10.93□□□□□ -0.66
SLIRP-205ENST00000556310 SLCO4C1Q6ZQN7 724 aa10.93□□□□□ -0.66
SLIRP-205ENST00000556310 ASB18Q6ZVZ8 466 aa10.93□□□□□ -0.66
SLIRP-205ENST00000556310 TRMT10CQ7L0Y3 403 aaKnown RBP10.93□□□□□ -0.66
SLIRP-205ENST00000556310 PRSS41Q7RTY9 318 aa10.93□□□□□ -0.66
SLIRP-205ENST00000556310 PRICKLE2Q7Z3G6 844 aa10.93□□□□□ -0.66
SLIRP-205ENST00000556310 PTRH1Q86Y79 214 aaKnown RBP10.93□□□□□ -0.66
SLIRP-205ENST00000556310 PRSS58Q8IYP2 241 aa10.93□□□□□ -0.66
SLIRP-205ENST00000556310 AFAP1L2Q8N4X5 818 aa10.93□□□□□ -0.66
SLIRP-205ENST00000556310 ANKRD53Q8N9V6 530 aa10.93□□□□□ -0.66
SLIRP-205ENST00000556310 KCT2Q8NC54 265 aa10.93□□□□□ -0.66
SLIRP-205ENST00000556310 LRRN4CLQ8ND94 238 aa10.93□□□□□ -0.66
SLIRP-205ENST00000556310 TRPV3Q8NET8 790 aa10.93□□□□□ -0.66
SLIRP-205ENST00000556310 FDCSPQ8NFU4 85 aa10.93□□□□□ -0.66
SLIRP-205ENST00000556310 RHEBL1Q8TAI7 183 aa10.93□□□□□ -0.66
SLIRP-205ENST00000556310 NT5CQ8TCD5 201 aa10.93□□□□□ -0.66
SLIRP-205ENST00000556310 UBTD2Q8WUN7 234 aa10.93□□□□□ -0.66
SLIRP-205ENST00000556310 KCTD4Q8WVF5 259 aa10.93□□□□□ -0.66
SLIRP-205ENST00000556310 NXNL1Q96CM4 212 aa10.93□□□□□ -0.66
SLIRP-205ENST00000556310 YIPF2Q9BWQ6 316 aa10.93□□□□□ -0.66
SLIRP-205ENST00000556310 EHD1Q9H4M9 534 aa10.93□□□□□ -0.66
SLIRP-205ENST00000556310 GPR83Q9NYM4 423 aa10.93□□□□□ -0.66
SLIRP-205ENST00000556310 ZNF180Q9UJW8 692 aa10.93□□□□□ -0.66
SLIRP-205ENST00000556310 ANAPC2Q9UJX6 822 aa10.93□□□□□ -0.66
SLIRP-205ENST00000556310 PTBP2Q9UKA9 531 aaKnown RBP10.93□□□□□ -0.66
SLIRP-205ENST00000556310 TENM4Q6N022 2769 aa10.93□□□□□ -0.66
SLIRP-205ENST00000556310 SPENQ96T58 3664 aaKnown RBP10.93□□□□□ -0.66
SLIRP-205ENST00000556310 A0A1W2PQ72 361 aa10.92□□□□□ -0.66
SLIRP-205ENST00000556310 IDSB3KWA1 339 aa10.92□□□□□ -0.66
SLIRP-205ENST00000556310 SUPT3HB4E1H0 165 aa10.92□□□□□ -0.66
SLIRP-205ENST00000556310 UBXN8O00124 270 aa10.92□□□□□ -0.66
SLIRP-205ENST00000556310 MAP2K7O14733 419 aa10.92□□□□□ -0.66
SLIRP-205ENST00000556310 KLHL41O60662 606 aa10.92□□□□□ -0.66
SLIRP-205ENST00000556310 RDH16O75452 317 aa10.92□□□□□ -0.66
SLIRP-205ENST00000556310 SUPT3HO75486 399 aa10.92□□□□□ -0.66
SLIRP-205ENST00000556310 KLHL18O94889 574 aa10.92□□□□□ -0.66
SLIRP-205ENST00000556310 KLHL2O95198 593 aa10.92□□□□□ -0.66
SLIRP-205ENST00000556310 SERPIND1P05546 499 aa10.92□□□□□ -0.66
SLIRP-205ENST00000556310 CYC1P08574 325 aa10.92□□□□□ -0.66
SLIRP-205ENST00000556310 C1GALT1C1LP0DN25 315 aa10.92□□□□□ -0.66
SLIRP-205ENST00000556310 ACPPP15309 386 aa10.92□□□□□ -0.66
SLIRP-205ENST00000556310 ALOX12P18054 663 aa10.92□□□□□ -0.66
SLIRP-205ENST00000556310 VARSP26640 1264 aaKnown RBP10.92□□□□□ -0.66
SLIRP-205ENST00000556310 GSTM2P28161 218 aa10.92□□□□□ -0.66
SLIRP-205ENST00000556310 TYK2P29597 1187 aa10.92□□□□□ -0.66
SLIRP-205ENST00000556310 MSH2P43246 934 aa10.92□□□□□ -0.66
SLIRP-205ENST00000556310 KCNC1P48547 511 aa10.92□□□□□ -0.66
SLIRP-205ENST00000556310 SOX8P57073 446 aa10.92□□□□□ -0.66
SLIRP-205ENST00000556310 MAT1AQ00266 395 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms