RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 PRAMEF9Q5VWM5 478 aa14.4□□□□□ -0.1
ACTN1-217ENST00000556203 ADGRD1Q6QNK2 874 aa14.4□□□□□ -0.1
ACTN1-217ENST00000556203 TMIGD1Q6UXZ0 262 aa14.4□□□□□ -0.1
ACTN1-217ENST00000556203 LAPTM4BQ86VI4 370 aa14.4□□□□□ -0.1
ACTN1-217ENST00000556203 PDSS2Q86YH6 399 aa14.4□□□□□ -0.1
ACTN1-217ENST00000556203 ZC3H7AQ8IWR0 971 aaKnown RBP14.4□□□□□ -0.1
ACTN1-217ENST00000556203 TRPV3Q8NET8 790 aa14.4□□□□□ -0.1
ACTN1-217ENST00000556203 CREB3L4Q8TEY5 395 aa14.4□□□□□ -0.1
ACTN1-217ENST00000556203 NACC2Q96BF6 587 aa14.4□□□□□ -0.1
ACTN1-217ENST00000556203 PTCD3Q96EY7 689 aaKnown RBP14.4□□□□□ -0.1
ACTN1-217ENST00000556203 EHD1Q9H4M9 534 aa14.4□□□□□ -0.1
ACTN1-217ENST00000556203 HCN3Q9P1Z3 774 aa14.4□□□□□ -0.1
ACTN1-217ENST00000556203 OPTCQ9UBM4 332 aa14.4□□□□□ -0.1
ACTN1-217ENST00000556203 FBXL4Q9UKA2 621 aa14.4□□□□□ -0.1
ACTN1-217ENST00000556203 TP53TG5Q9Y2B4 290 aa14.4□□□□□ -0.1
ACTN1-217ENST00000556203 NAALAD2Q9Y3Q0 740 aa14.4□□□□□ -0.1
ACTN1-217ENST00000556203 HS3ST3B1Q9Y662 390 aa14.4□□□□□ -0.1
ACTN1-217ENST00000556203 SMG1Q96Q15 3661 aaKnown RBP14.39□□□□□ -0.11
ACTN1-217ENST00000556203 A6NL46 340 aa14.39□□□□□ -0.11
ACTN1-217ENST00000556203 K7EM74 188 aa14.39□□□□□ -0.11
ACTN1-217ENST00000556203 AGPSO00116 658 aa14.39□□□□□ -0.11
ACTN1-217ENST00000556203 MASP2O00187 686 aa14.39□□□□□ -0.11
ACTN1-217ENST00000556203 SOCS6O14544 535 aa14.39□□□□□ -0.11
ACTN1-217ENST00000556203 RDH16O75452 317 aa14.39□□□□□ -0.11
ACTN1-217ENST00000556203 IGHEP01854 428 aa14.39□□□□□ -0.11
ACTN1-217ENST00000556203 RBP1P09455 135 aa14.39□□□□□ -0.11
ACTN1-217ENST00000556203 ZNF888P0CJ79 500 aaPredicted RBP14.39□□□□□ -0.11
ACTN1-217ENST00000556203 NR1D1P20393 614 aa14.39□□□□□ -0.11
ACTN1-217ENST00000556203 HNF4AP41235 474 aa14.39□□□□□ -0.11
ACTN1-217ENST00000556203 EMP2P54851 167 aa14.39□□□□□ -0.11
ACTN1-217ENST00000556203 IRF8Q02556 426 aa14.39□□□□□ -0.11
ACTN1-217ENST00000556203 DOC2AQ14183 400 aa14.39□□□□□ -0.11
ACTN1-217ENST00000556203 SETDB1Q15047 1291 aa14.39□□□□□ -0.11
ACTN1-217ENST00000556203 PFKFB4Q16877 469 aa14.39□□□□□ -0.11
ACTN1-217ENST00000556203 KIRREL2Q6UWL6 708 aa14.39□□□□□ -0.11
ACTN1-217ENST00000556203 ABHD13Q7L211 337 aa14.39□□□□□ -0.11
ACTN1-217ENST00000556203 SHISA5Q8N114 240 aa14.39□□□□□ -0.11
ACTN1-217ENST00000556203 AFAP1L2Q8N4X5 818 aa14.39□□□□□ -0.11
ACTN1-217ENST00000556203 CLEC1AQ8NC01 280 aa14.39□□□□□ -0.11
ACTN1-217ENST00000556203 TTLQ8NG68 377 aa14.39□□□□□ -0.11
ACTN1-217ENST00000556203 UBLCP1Q8WVY7 318 aaPredicted RBP14.39□□□□□ -0.11
ACTN1-217ENST00000556203 MTBPQ96DY7 904 aa14.39□□□□□ -0.11
ACTN1-217ENST00000556203 SCYL1Q96KG9 808 aa14.39□□□□□ -0.11
ACTN1-217ENST00000556203 SLC25A23Q9BV35 468 aa14.39□□□□□ -0.11
ACTN1-217ENST00000556203 TGIF2Q9GZN2 237 aa14.39□□□□□ -0.11
ACTN1-217ENST00000556203 SLC6A16Q9GZN6 736 aa14.39□□□□□ -0.11
ACTN1-217ENST00000556203 CPSF2Q9P2I0 782 aaKnown RBP14.39□□□□□ -0.11
ACTN1-217ENST00000556203 XPR1Q9UBH6 696 aa14.39□□□□□ -0.11
ACTN1-217ENST00000556203 PCSK5Q92824 1860 aa14.38□□□□□ -0.11
ACTN1-217ENST00000556203 IQANK1A0A1B0GTG1 560 aa14.38□□□□□ -0.11
ACTN1-217ENST00000556203 URADA6NGE7 173 aa14.38□□□□□ -0.11
ACTN1-217ENST00000556203 ZNF860A6NHJ4 632 aa14.38□□□□□ -0.11
ACTN1-217ENST00000556203 IDSB3KWA1 339 aa14.38□□□□□ -0.11
ACTN1-217ENST00000556203 B8ZZF3 427 aa14.38□□□□□ -0.11
ACTN1-217ENST00000556203 K7EPI3 171 aa14.38□□□□□ -0.11
ACTN1-217ENST00000556203 KLK8O60259 260 aa14.38□□□□□ -0.11
ACTN1-217ENST00000556203 JRKO75564 520 aa14.38□□□□□ -0.11
ACTN1-217ENST00000556203 CEACAM4O75871 244 aa14.38□□□□□ -0.11
ACTN1-217ENST00000556203 SLU7O95391 586 aaKnown RBP14.38□□□□□ -0.11
ACTN1-217ENST00000556203 BMP10O95393 424 aa14.38□□□□□ -0.11
ACTN1-217ENST00000556203 B3GALT4O96024 378 aa14.38□□□□□ -0.11
ACTN1-217ENST00000556203 PDGFAP04085 211 aa14.38□□□□□ -0.11
ACTN1-217ENST00000556203 HEXBP07686 556 aa14.38□□□□□ -0.11
ACTN1-217ENST00000556203 SERPINA6P08185 405 aa14.38□□□□□ -0.11
ACTN1-217ENST00000556203 COL6A2P12110 1019 aa14.38□□□□□ -0.11
ACTN1-217ENST00000556203 ALOX12P18054 663 aa14.38□□□□□ -0.11
ACTN1-217ENST00000556203 CD22P20273 847 aa14.38□□□□□ -0.11
ACTN1-217ENST00000556203 ALDH18A1P54886 795 aaKnown RBP14.38□□□□□ -0.11
ACTN1-217ENST00000556203 RAB8AP61006 207 aa14.38□□□□□ -0.11
ACTN1-217ENST00000556203 HYAL2Q12891 473 aa14.38□□□□□ -0.11
ACTN1-217ENST00000556203 CHIT1Q13231 466 aa14.38□□□□□ -0.11
ACTN1-217ENST00000556203 TSNAXIP1Q2TAA8 658 aa14.38□□□□□ -0.11
ACTN1-217ENST00000556203 DEFB134Q4QY38 66 aa14.38□□□□□ -0.11
ACTN1-217ENST00000556203 TOR1AIP1Q5JTV8 583 aa14.38□□□□□ -0.11
ACTN1-217ENST00000556203 TCTN3Q6NUS6 607 aa14.38□□□□□ -0.11
ACTN1-217ENST00000556203 TIFABQ6ZNK6 161 aa14.38□□□□□ -0.11
ACTN1-217ENST00000556203 PTRH1Q86Y79 214 aaKnown RBP14.38□□□□□ -0.11
ACTN1-217ENST00000556203 FDCSPQ8NFU4 85 aa14.38□□□□□ -0.11
ACTN1-217ENST00000556203 OR51Q1Q8NH59 317 aa14.38□□□□□ -0.11
ACTN1-217ENST00000556203 UTP15Q8TED0 518 aaKnown RBP14.38□□□□□ -0.11
ACTN1-217ENST00000556203 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.38□□□□□ -0.113e-6■■■■■ 50.8
ACTN1-217ENST00000556203 CCT6BQ92526 530 aa14.38□□□□□ -0.11
ACTN1-217ENST00000556203 WDR34Q96EX3 536 aa14.38□□□□□ -0.11
ACTN1-217ENST00000556203 CCDC77Q9BR77 488 aa14.38□□□□□ -0.11
ACTN1-217ENST00000556203 MESP1Q9BRJ9 268 aa14.38□□□□□ -0.11
ACTN1-217ENST00000556203 EFCAB11Q9BUY7 163 aa14.38□□□□□ -0.11
ACTN1-217ENST00000556203 PITHD1Q9GZP4 211 aaPredicted RBP14.38□□□□□ -0.11
ACTN1-217ENST00000556203 KLHL31Q9H511 634 aa14.38□□□□□ -0.11
ACTN1-217ENST00000556203 NT5DC2Q9H857 520 aa14.38□□□□□ -0.11
ACTN1-217ENST00000556203 PSMC3IPQ9P2W1 217 aaPredicted RBP14.38□□□□□ -0.11
ACTN1-217ENST00000556203 COPG2Q9UBF2 871 aa14.38□□□□□ -0.11
ACTN1-217ENST00000556203 FETUBQ9UGM5 382 aa14.38□□□□□ -0.11
ACTN1-217ENST00000556203 ATRXP46100 2492 aa14.38□□□□□ -0.11
ACTN1-217ENST00000556203 ATMQ13315 3056 aa14.38□□□□□ -0.11
ACTN1-217ENST00000556203 MDC1Q14676 2089 aaKnown RBP14.37□□□□□ -0.11
ACTN1-217ENST00000556203 GALR3O60755 368 aaPredicted RBP14.37□□□□□ -0.11
ACTN1-217ENST00000556203 ALOX12BO75342 701 aa14.37□□□□□ -0.11
ACTN1-217ENST00000556203 SHBGP04278 402 aa14.37□□□□□ -0.11
ACTN1-217ENST00000556203 ACPPP15309 386 aa14.37□□□□□ -0.11
ACTN1-217ENST00000556203 EPB42P16452 691 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms