RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 PPP1R3AQ16821 1122 aa3.76□□□□□ -1.81
LINC00648-202ENST00000555985 AMZ1Q400G9 498 aa3.76□□□□□ -1.81
LINC00648-202ENST00000555985 CCSMST1Q4G0I0 132 aa3.76□□□□□ -1.81
LINC00648-202ENST00000555985 FCRL6Q6DN72 434 aa3.76□□□□□ -1.81
LINC00648-202ENST00000555985 ZNF470Q6ECI4 717 aa3.76□□□□□ -1.81
LINC00648-202ENST00000555985 INO80CQ6PI98 192 aaPredicted RBP3.76□□□□□ -1.81
LINC00648-202ENST00000555985 SPESP1Q6UW49 350 aa3.76□□□□□ -1.81
LINC00648-202ENST00000555985 NAPRTQ6XQN6 538 aa3.76□□□□□ -1.81
LINC00648-202ENST00000555985 KCNMB4Q86W47 210 aa3.76□□□□□ -1.81
LINC00648-202ENST00000555985 AMIGO1Q86WK6 493 aa3.76□□□□□ -1.81
LINC00648-202ENST00000555985 ZBTB2Q8N680 514 aa3.76□□□□□ -1.81
LINC00648-202ENST00000555985 POU5F2Q8N7G0 328 aa3.76□□□□□ -1.81
LINC00648-202ENST00000555985 PCYOX1LQ8NBM8 494 aa3.76□□□□□ -1.81
LINC00648-202ENST00000555985 ZNF248Q8NDW4 579 aa3.76□□□□□ -1.81
LINC00648-202ENST00000555985 JPH3Q8WXH2 748 aaPredicted RBP3.76□□□□□ -1.81
LINC00648-202ENST00000555985 ELMO1Q92556 727 aa3.76□□□□□ -1.81
LINC00648-202ENST00000555985 TMIGD2Q96BF3 282 aa3.76□□□□□ -1.81
LINC00648-202ENST00000555985 ZNF669Q96BR6 464 aaPredicted RBP3.76□□□□□ -1.81
LINC00648-202ENST00000555985 CXorf40BQ96DE9 158 aa3.76□□□□□ -1.81
LINC00648-202ENST00000555985 CERS2Q96G23 380 aa3.76□□□□□ -1.81
LINC00648-202ENST00000555985 ZDHHC12Q96GR4 267 aa3.76□□□□□ -1.81
LINC00648-202ENST00000555985 CRELD1Q96HD1 420 aa3.76□□□□□ -1.81
LINC00648-202ENST00000555985 PPM1MQ96MI6 270 aa3.76□□□□□ -1.81
LINC00648-202ENST00000555985 LRFN5Q96NI6 719 aa3.76□□□□□ -1.81
LINC00648-202ENST00000555985 TEFMQ96QE5 360 aaKnown RBP3.76□□□□□ -1.81
LINC00648-202ENST00000555985 CMKLR1Q99788 373 aa3.76□□□□□ -1.81
LINC00648-202ENST00000555985 HAUS8Q9BT25 410 aa3.76□□□□□ -1.81
LINC00648-202ENST00000555985 SLC12A9Q9BXP2 914 aa3.76□□□□□ -1.81
LINC00648-202ENST00000555985 ALG2Q9H553 416 aa3.76□□□□□ -1.81
LINC00648-202ENST00000555985 STN1Q9H668 368 aaKnown RBP3.76□□□□□ -1.81
LINC00648-202ENST00000555985 APMAPQ9HDC9 416 aa3.76□□□□□ -1.81
LINC00648-202ENST00000555985 C1GALT1Q9NS00 363 aa3.76□□□□□ -1.81
LINC00648-202ENST00000555985 SPHK1Q9NYA1 384 aa3.76□□□□□ -1.81
LINC00648-202ENST00000555985 KLHL3Q9UH77 587 aa3.76□□□□□ -1.81
LINC00648-202ENST00000555985 FBXO5Q9UKT4 447 aa3.76□□□□□ -1.81
LINC00648-202ENST00000555985 IKZF3Q9UKT9 509 aa3.76□□□□□ -1.81
LINC00648-202ENST00000555985 B3GALT1Q9Y5Z6 326 aa3.76□□□□□ -1.81
LINC00648-202ENST00000555985 PSAT1Q9Y617 370 aa3.76□□□□□ -1.81
LINC00648-202ENST00000555985 AP4B1Q9Y6B7 739 aa3.76□□□□□ -1.81
LINC00648-202ENST00000555985 MAP1BP46821 2468 aaKnown RBP3.76□□□□□ -1.81
LINC00648-202ENST00000555985 UBA6A0AVT1 1052 aaPredicted RBP3.75□□□□□ -1.81
LINC00648-202ENST00000555985 HMX2A2RU54 273 aa3.75□□□□□ -1.81
LINC00648-202ENST00000555985 FITM1A5D6W6 292 aa3.75□□□□□ -1.81
LINC00648-202ENST00000555985 OR6C74A6NCV1 312 aa3.75□□□□□ -1.81
LINC00648-202ENST00000555985 TRIM64CA6NLI5 447 aa3.75□□□□□ -1.81
LINC00648-202ENST00000555985 EFCAB7A8K855 629 aa3.75□□□□□ -1.81
LINC00648-202ENST00000555985 NOTOA8MTQ0 251 aa3.75□□□□□ -1.81
LINC00648-202ENST00000555985 PDZK1P1A8MUH7 402 aa3.75□□□□□ -1.81
LINC00648-202ENST00000555985 ARHGEF33A8MVX0 844 aa3.75□□□□□ -1.81
LINC00648-202ENST00000555985 POC1B-GALNT4F8VUJ3 575 aa3.75□□□□□ -1.81
LINC00648-202ENST00000555985 H3BNX3 289 aa3.75□□□□□ -1.81
LINC00648-202ENST00000555985 STAMBPO95630 424 aa3.75□□□□□ -1.81
LINC00648-202ENST00000555985 ESRRBO95718 433 aa3.75□□□□□ -1.81
LINC00648-202ENST00000555985 INHBBP09529 407 aa3.75□□□□□ -1.81
LINC00648-202ENST00000555985 ERVK-10P10266 1014 aa3.75□□□□□ -1.81
LINC00648-202ENST00000555985 UGT2B7P16662 529 aa3.75□□□□□ -1.81
LINC00648-202ENST00000555985 PAMP19021 973 aa3.75□□□□□ -1.81
LINC00648-202ENST00000555985 MPSTP25325 297 aa3.75□□□□□ -1.81
LINC00648-202ENST00000555985 PRDX3P30048 256 aaKnown RBP3.75□□□□□ -1.81
LINC00648-202ENST00000555985 FMO4P31512 558 aa3.75□□□□□ -1.81
LINC00648-202ENST00000555985 SHMT2P34897 504 aa3.75□□□□□ -1.81
LINC00648-202ENST00000555985 RCVRNP35243 200 aa3.75□□□□□ -1.81
LINC00648-202ENST00000555985 MAGEA4P43358 317 aa3.75□□□□□ -1.81
LINC00648-202ENST00000555985 MAGEA12P43365 314 aa3.75□□□□□ -1.81
LINC00648-202ENST00000555985 PCYT1AP49585 367 aa3.75□□□□□ -1.81
LINC00648-202ENST00000555985 SH3BP2P78314 561 aa3.75□□□□□ -1.81
LINC00648-202ENST00000555985 ELOAQ14241 798 aaKnown RBP3.75□□□□□ -1.81
LINC00648-202ENST00000555985 GK3PQ14409 553 aa3.75□□□□□ -1.81
LINC00648-202ENST00000555985 KIR2DS3Q14952 304 aa3.75□□□□□ -1.81
LINC00648-202ENST00000555985 HIF1AQ16665 826 aa3.75□□□□□ -1.81
LINC00648-202ENST00000555985 ANKS6Q68DC2 871 aa3.75□□□□□ -1.81
LINC00648-202ENST00000555985 OGFOD2Q6N063 350 aa3.75□□□□□ -1.81
LINC00648-202ENST00000555985 CDHR3Q6ZTQ4 885 aa3.75□□□□□ -1.81
LINC00648-202ENST00000555985 RNF44Q7L0R7 432 aa3.75□□□□□ -1.81
LINC00648-202ENST00000555985 AMIGO2Q86SJ2 522 aa3.75□□□□□ -1.81
LINC00648-202ENST00000555985 ZC3HC1Q86WB0 502 aaKnown RBP3.75□□□□□ -1.81
LINC00648-202ENST00000555985 DCUN1D3Q8IWE4 304 aa3.75□□□□□ -1.81
LINC00648-202ENST00000555985 TMCO5AQ8N6Q1 288 aa3.75□□□□□ -1.81
LINC00648-202ENST00000555985 LMNTD1Q8N9Z9 388 aa3.75□□□□□ -1.81
LINC00648-202ENST00000555985 OR6P1Q8NGX9 317 aa3.75□□□□□ -1.81
LINC00648-202ENST00000555985 OR8K5Q8NH50 307 aa3.75□□□□□ -1.81
LINC00648-202ENST00000555985 CALML6Q8TD86 181 aa3.75□□□□□ -1.81
LINC00648-202ENST00000555985 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.75□□□□□ -1.81
LINC00648-202ENST00000555985 ISL2Q96A47 359 aa3.75□□□□□ -1.81
LINC00648-202ENST00000555985 MAELQ96JY0 434 aaKnown RBP3.75□□□□□ -1.81
LINC00648-202ENST00000555985 CNBD2Q96M20 576 aa3.75□□□□□ -1.81
LINC00648-202ENST00000555985 MAP3K3Q99759 626 aa3.75□□□□□ -1.81
LINC00648-202ENST00000555985 OLFM1Q99784 485 aa3.75□□□□□ -1.81
LINC00648-202ENST00000555985 TRIT1Q9H3H1 467 aaKnown RBP3.75□□□□□ -1.81
LINC00648-202ENST00000555985 POPDC3Q9HBV1 291 aa3.75□□□□□ -1.81
LINC00648-202ENST00000555985 PALMDQ9NP74 551 aa3.75□□□□□ -1.81
LINC00648-202ENST00000555985 IMP3Q9NV31 184 aaKnown RBP3.75□□□□□ -1.81
LINC00648-202ENST00000555985 SLC17A6Q9P2U8 582 aa3.75□□□□□ -1.81
LINC00648-202ENST00000555985 FBXO9Q9UK97 447 aaPredicted RBP3.75□□□□□ -1.81
LINC00648-202ENST00000555985 ERVK-11Q9UQG0 969 aa3.75□□□□□ -1.81
LINC00648-202ENST00000555985 RBMX2Q9Y388 322 aaKnown RBP3.75□□□□□ -1.81
LINC00648-202ENST00000555985 PCDHB3Q9Y5E6 796 aa3.75□□□□□ -1.81
LINC00648-202ENST00000555985 IGSF10Q6WRI0 2623 aa3.75□□□□□ -1.81
LINC00648-202ENST00000555985 PKD1L2Q7Z442 2459 aa3.75□□□□□ -1.81
LINC00648-202ENST00000555985 LOC100996750A0A140TA64 210 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms