RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 CREG2Q8IUH2 290 aa11.97□□□□□ -0.49
HNRNPC-221ENST00000555883 NKAPQ8N5F7 415 aaKnown RBP11.97□□□□□ -0.49
HNRNPC-221ENST00000555883 GPATCH11Q8N954 259 aa11.97□□□□□ -0.49
HNRNPC-221ENST00000555883 ZNF740Q8NDX6 193 aa11.97□□□□□ -0.49
HNRNPC-221ENST00000555883 OLFM1Q99784 485 aa11.97□□□□□ -0.49
HNRNPC-221ENST00000555883 MACROD1Q9BQ69 325 aa11.97□□□□□ -0.49
HNRNPC-221ENST00000555883 WDR83Q9BRX9 315 aaKnown RBP11.97□□□□□ -0.49
HNRNPC-221ENST00000555883 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.97□□□□□ -0.49
HNRNPC-221ENST00000555883 PELI2Q9HAT8 420 aa11.97□□□□□ -0.49
HNRNPC-221ENST00000555883 POPDC3Q9HBV1 291 aa11.97□□□□□ -0.49
HNRNPC-221ENST00000555883 LANCL2Q9NS86 450 aa11.97□□□□□ -0.49
HNRNPC-221ENST00000555883 HCN3Q9P1Z3 774 aa11.97□□□□□ -0.49
HNRNPC-221ENST00000555883 ZFATQ9P243 1243 aa11.97□□□□□ -0.49
HNRNPC-221ENST00000555883 RNF14Q9UBS8 474 aa11.97□□□□□ -0.49
HNRNPC-221ENST00000555883 CPAMD8Q8IZJ3 1885 aa11.97□□□□□ -0.49
HNRNPC-221ENST00000555883 NOTCH2Q04721 2471 aa11.97□□□□□ -0.49
HNRNPC-221ENST00000555883 URADA6NGE7 173 aa11.96□□□□□ -0.49
HNRNPC-221ENST00000555883 E7ESA3 106 aa11.96□□□□□ -0.49
HNRNPC-221ENST00000555883 TP73O15350 636 aa11.96□□□□□ -0.49
HNRNPC-221ENST00000555883 NDUFS4O43181 175 aa11.96□□□□□ -0.49
HNRNPC-221ENST00000555883 OR1F1O43749 312 aa11.96□□□□□ -0.49
HNRNPC-221ENST00000555883 RDH16O75452 317 aa11.96□□□□□ -0.49
HNRNPC-221ENST00000555883 ALOX12P18054 663 aa11.96□□□□□ -0.49
HNRNPC-221ENST00000555883 SCTRP47872 440 aa11.96□□□□□ -0.49
HNRNPC-221ENST00000555883 HNMTP50135 292 aa11.96□□□□□ -0.49
HNRNPC-221ENST00000555883 MEF2AQ02078 507 aaPredicted RBP11.96□□□□□ -0.49
HNRNPC-221ENST00000555883 ZNF33BQ06732 778 aa11.96□□□□□ -0.49
HNRNPC-221ENST00000555883 RGS1Q08116 209 aa11.96□□□□□ -0.49
HNRNPC-221ENST00000555883 MGAT5Q09328 741 aa11.96□□□□□ -0.49
HNRNPC-221ENST00000555883 CSHL1Q14406 222 aa11.96□□□□□ -0.49
HNRNPC-221ENST00000555883 ABRAXAS2Q15018 415 aa11.96□□□□□ -0.49
HNRNPC-221ENST00000555883 NSDHLQ15738 373 aa11.96□□□□□ -0.49
HNRNPC-221ENST00000555883 MEP1AQ16819 746 aa11.96□□□□□ -0.49
HNRNPC-221ENST00000555883 MFSD4BQ5TF39 518 aa11.96□□□□□ -0.49
HNRNPC-221ENST00000555883 ABHD13Q7L211 337 aa11.96□□□□□ -0.49
HNRNPC-221ENST00000555883 TRPV3Q8NET8 790 aa11.96□□□□□ -0.49
HNRNPC-221ENST00000555883 ZCCHC10Q8TBK6 192 aa11.96□□□□□ -0.49
HNRNPC-221ENST00000555883 SLC5A11Q8WWX8 675 aa11.96□□□□□ -0.49
HNRNPC-221ENST00000555883 NEIL2Q969S2 332 aa11.96□□□□□ -0.49
HNRNPC-221ENST00000555883 TBC1D20Q96BZ9 403 aa11.96□□□□□ -0.49
HNRNPC-221ENST00000555883 PYCR2Q96C36 320 aa11.96□□□□□ -0.49
HNRNPC-221ENST00000555883 SEC16BQ96JE7 1060 aa11.96□□□□□ -0.49
HNRNPC-221ENST00000555883 MAGEB10Q96LZ2 347 aaPredicted RBP11.96□□□□□ -0.49
HNRNPC-221ENST00000555883 LPAR4Q99677 370 aa11.96□□□□□ -0.49
HNRNPC-221ENST00000555883 KCNF1Q9H3M0 494 aa11.96□□□□□ -0.49
HNRNPC-221ENST00000555883 GRPEL1Q9HAV7 217 aa11.96□□□□□ -0.49
HNRNPC-221ENST00000555883 NSMCE4AQ9NXX6 385 aa11.96□□□□□ -0.49
HNRNPC-221ENST00000555883 MOCS1Q9NZB8 636 aa11.96□□□□□ -0.49
HNRNPC-221ENST00000555883 CHMP2BQ9UQN3 213 aa11.96□□□□□ -0.49
HNRNPC-221ENST00000555883 STATHP02808 62 aa11.95□□□□□ -0.5
HNRNPC-221ENST00000555883 FHP07954 510 aa11.95□□□□□ -0.5
HNRNPC-221ENST00000555883 GSTM2P28161 218 aa11.95□□□□□ -0.5
HNRNPC-221ENST00000555883 ITGA8P53708 1063 aa11.95□□□□□ -0.5
HNRNPC-221ENST00000555883 REEP5Q00765 189 aa11.95□□□□□ -0.5
HNRNPC-221ENST00000555883 USP10Q14694 798 aaKnown RBP11.95□□□□□ -0.5
HNRNPC-221ENST00000555883 SFT2D3Q587I9 215 aa11.95□□□□□ -0.5
HNRNPC-221ENST00000555883 CATSPEREQ5SY80 951 aa11.95□□□□□ -0.5
HNRNPC-221ENST00000555883 MTFR2Q6P444 385 aa11.95□□□□□ -0.5
HNRNPC-221ENST00000555883 PAPD4Q6PIY7 484 aaKnown RBP11.95□□□□□ -0.5
HNRNPC-221ENST00000555883 QSOX2Q6ZRP7 698 aa11.95□□□□□ -0.5
HNRNPC-221ENST00000555883 ZC3HC1Q86WB0 502 aaKnown RBP11.95□□□□□ -0.5
HNRNPC-221ENST00000555883 TICAM1Q8IUC6 712 aa11.95□□□□□ -0.5
HNRNPC-221ENST00000555883 KLHDC8AQ8IYD2 350 aa11.95□□□□□ -0.5
HNRNPC-221ENST00000555883 SLC5A8Q8N695 610 aa11.95□□□□□ -0.5
HNRNPC-221ENST00000555883 MDS2Q8NDY4 140 aa11.95□□□□□ -0.5
HNRNPC-221ENST00000555883 ALKBH8Q96BT7 664 aaKnown RBP11.95□□□□□ -0.5
HNRNPC-221ENST00000555883 CFAP36Q96G28 342 aa11.95□□□□□ -0.5
HNRNPC-221ENST00000555883 AIF1LQ9BQI0 150 aa11.95□□□□□ -0.5
HNRNPC-221ENST00000555883 MCMBPQ9BTE3 642 aa11.95□□□□□ -0.5
HNRNPC-221ENST00000555883 SLC6A16Q9GZN6 736 aa11.95□□□□□ -0.5
HNRNPC-221ENST00000555883 TRMT1Q9NXH9 659 aaKnown RBP11.95□□□□□ -0.5
HNRNPC-221ENST00000555883 SLC17A6Q9P2U8 582 aa11.95□□□□□ -0.5
HNRNPC-221ENST00000555883 COPG2Q9UBF2 871 aa11.95□□□□□ -0.5
HNRNPC-221ENST00000555883 OARD1Q9Y530 152 aa11.95□□□□□ -0.5
HNRNPC-221ENST00000555883 SAR1BQ9Y6B6 198 aa11.95□□□□□ -0.5
HNRNPC-221ENST00000555883 KCNE2Q9Y6J6 123 aa11.95□□□□□ -0.5
HNRNPC-221ENST00000555883 IGHV3-20A0A0C4DH32 117 aa11.94□□□□□ -0.5
HNRNPC-221ENST00000555883 ASPDHA6ND91 283 aa11.94□□□□□ -0.5
HNRNPC-221ENST00000555883 SYNDIG1LA6NDD5 238 aa11.94□□□□□ -0.5
HNRNPC-221ENST00000555883 MLYCDO95822 493 aa11.94□□□□□ -0.5
HNRNPC-221ENST00000555883 GUCA1CO95843 209 aa11.94□□□□□ -0.5
HNRNPC-221ENST00000555883 SERPINA6P08185 405 aa11.94□□□□□ -0.5
HNRNPC-221ENST00000555883 SMIM10L1P0DMW3 83 aa11.94□□□□□ -0.5
HNRNPC-221ENST00000555883 TAS2R50P59544 299 aa11.94□□□□□ -0.5
HNRNPC-221ENST00000555883 TUBA3CQ13748 450 aa11.94□□□□□ -0.5
HNRNPC-221ENST00000555883 DEFB134Q4QY38 66 aa11.94□□□□□ -0.5
HNRNPC-221ENST00000555883 ZNF766Q5HY98 468 aa11.94□□□□□ -0.5
HNRNPC-221ENST00000555883 ZNF787Q6DD87 383 aa11.94□□□□□ -0.5
HNRNPC-221ENST00000555883 TUBA3EQ6PEY2 450 aa11.94□□□□□ -0.5
HNRNPC-221ENST00000555883 NXPE4Q6UWF7 544 aa11.94□□□□□ -0.5
HNRNPC-221ENST00000555883 TMEM207Q6UWW9 146 aa11.94□□□□□ -0.5
HNRNPC-221ENST00000555883 GFRALQ6UXV0 394 aa11.94□□□□□ -0.5
HNRNPC-221ENST00000555883 ADAMTSL2Q86TH1 951 aa11.94□□□□□ -0.5
HNRNPC-221ENST00000555883 THOC6Q86W42 341 aaKnown RBP11.94□□□□□ -0.5
HNRNPC-221ENST00000555883 LURAP1LQ8IV03 231 aa11.94□□□□□ -0.5
HNRNPC-221ENST00000555883 BEST3Q8N1M1 668 aa11.94□□□□□ -0.5
HNRNPC-221ENST00000555883 ARMC10Q8N2F6 343 aa11.94□□□□□ -0.5
HNRNPC-221ENST00000555883 HORMAD2Q8N7B1 307 aa11.94□□□□□ -0.5
HNRNPC-221ENST00000555883 ANKRD53Q8N9V6 530 aa11.94□□□□□ -0.5
HNRNPC-221ENST00000555883 BBOF1Q8ND07 529 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms