RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 PSMD10O75832 226 aa2.61□□□□□ -1.99
SNX6-204ENST00000555541 RENP00797 406 aa2.61□□□□□ -1.99
SNX6-204ENST00000555541 RPLP0P05388 317 aaKnown RBP2.61□□□□□ -1.99
SNX6-204ENST00000555541 C4BPBP20851 252 aa2.61□□□□□ -1.99
SNX6-204ENST00000555541 LMO2P25791 158 aa2.61□□□□□ -1.99
SNX6-204ENST00000555541 MC5RP33032 325 aa2.61□□□□□ -1.99
SNX6-204ENST00000555541 SFTPDP35247 375 aa2.61□□□□□ -1.99
SNX6-204ENST00000555541 ABCE1P61221 599 aaKnown RBP2.61□□□□□ -1.99
SNX6-204ENST00000555541 RBPJQ06330 500 aa2.61□□□□□ -1.99
SNX6-204ENST00000555541 CACNG1Q06432 222 aa2.61□□□□□ -1.99
SNX6-204ENST00000555541 ARMC4Q5T2S8 1044 aa2.61□□□□□ -1.99
SNX6-204ENST00000555541 WDR78Q5VTH9 848 aa2.61□□□□□ -1.99
SNX6-204ENST00000555541 KHDRBS2Q5VWX1 349 aaKnown RBP2.61□□□□□ -1.99
SNX6-204ENST00000555541 SUSD4Q5VX71 490 aa2.61□□□□□ -1.99
SNX6-204ENST00000555541 NAA16Q6N069 864 aaPredicted RBP2.61□□□□□ -1.99
SNX6-204ENST00000555541 ZBED8Q8IZ13 594 aa2.61□□□□□ -1.99
SNX6-204ENST00000555541 ANKRD13CQ8N6S4 541 aa2.61□□□□□ -1.99
SNX6-204ENST00000555541 POGLUT1Q8NBL1 392 aa2.61□□□□□ -1.99
SNX6-204ENST00000555541 OR9Q2Q8NGE9 314 aa2.61□□□□□ -1.99
SNX6-204ENST00000555541 RHOXF1Q8NHV9 184 aa2.61□□□□□ -1.99
SNX6-204ENST00000555541 CASP10Q92851 521 aa2.61□□□□□ -1.99
SNX6-204ENST00000555541 PGM2Q96G03 612 aa2.61□□□□□ -1.99
SNX6-204ENST00000555541 UBAC1Q9BSL1 405 aa2.61□□□□□ -1.99
SNX6-204ENST00000555541 VSIG4Q9Y279 399 aa2.61□□□□□ -1.99
SNX6-204ENST00000555541 NKX6-3A6NJ46 265 aa2.6□□□□□ -1.99
SNX6-204ENST00000555541 MAGEB2O15479 319 aa2.6□□□□□ -1.99
SNX6-204ENST00000555541 SH3BGRLO75368 114 aa2.6□□□□□ -1.99
SNX6-204ENST00000555541 TADA2AO75478 443 aa2.6□□□□□ -1.99
SNX6-204ENST00000555541 YES1P07947 543 aa2.6□□□□□ -1.99
SNX6-204ENST00000555541 OR52Z1P0C646 297 aa2.6□□□□□ -1.99
SNX6-204ENST00000555541 DUTP33316 252 aaKnown RBP2.6□□□□□ -1.99
SNX6-204ENST00000555541 HSD17B3P37058 310 aa2.6□□□□□ -1.99
SNX6-204ENST00000555541 SRPXP78539 464 aa2.6□□□□□ -1.99
SNX6-204ENST00000555541 IFI35P80217 286 aaPredicted RBP2.6□□□□□ -1.99
SNX6-204ENST00000555541 SIX1Q15475 284 aaPredicted RBP2.6□□□□□ -1.99
SNX6-204ENST00000555541 CRY2Q49AN0 593 aa2.6□□□□□ -1.99
SNX6-204ENST00000555541 LACTB2Q53H82 288 aaPredicted RBP2.6□□□□□ -1.99
SNX6-204ENST00000555541 C9orf152Q5JTZ5 239 aa2.6□□□□□ -1.99
SNX6-204ENST00000555541 C9orf66Q5T8R8 295 aa2.6□□□□□ -1.99
SNX6-204ENST00000555541 FHL5Q5TD97 284 aa2.6□□□□□ -1.99
SNX6-204ENST00000555541 AGAP7PQ5VUJ5 663 aa2.6□□□□□ -1.99
SNX6-204ENST00000555541 KRT39Q6A163 491 aa2.6□□□□□ -1.99
SNX6-204ENST00000555541 RBPMS2Q6ZRY4 209 aaKnown RBP2.6□□□□□ -1.99
SNX6-204ENST00000555541 ANKRD33Q7Z3H0 272 aa2.6□□□□□ -1.99
SNX6-204ENST00000555541 CARM1Q86X55 608 aa2.6□□□□□ -1.99
SNX6-204ENST00000555541 ZC3H3Q8IXZ2 948 aaKnown RBP2.6□□□□□ -1.99
SNX6-204ENST00000555541 POMGNT2Q8NAT1 580 aa2.6□□□□□ -1.99
SNX6-204ENST00000555541 SEPT1Q8WYJ6 367 aa2.6□□□□□ -1.99
SNX6-204ENST00000555541 SECISBP2LQ93073 1101 aaKnown RBP2.6□□□□□ -1.99
SNX6-204ENST00000555541 SPSB1Q96BD6 273 aa2.6□□□□□ -1.99
SNX6-204ENST00000555541 RIMS4Q9H426 269 aaPredicted RBP2.6□□□□□ -1.99
SNX6-204ENST00000555541 RNF121Q9H920 327 aa2.6□□□□□ -1.99
SNX6-204ENST00000555541 IL1RAPQ9NPH3 570 aa2.6□□□□□ -1.99
SNX6-204ENST00000555541 KLK11Q9UBX7 282 aa2.6□□□□□ -1.99
SNX6-204ENST00000555541 PILRAQ9UKJ1 303 aa2.6□□□□□ -1.99
SNX6-204ENST00000555541 IGHV3-16A0A0C4DH30 117 aa2.59□□□□□ -1.99
SNX6-204ENST00000555541 A8MVM7 634 aa2.59□□□□□ -1.99
SNX6-204ENST00000555541 K7EQG2 157 aa2.59□□□□□ -1.99
SNX6-204ENST00000555541 PDHXO00330 501 aa2.59□□□□□ -1.99
SNX6-204ENST00000555541 WDHD1O75717 1129 aaPredicted RBP2.59□□□□□ -1.99
SNX6-204ENST00000555541 KLK2P20151 261 aa2.59□□□□□ -1.99
SNX6-204ENST00000555541 GSK3BP49841 420 aa2.59□□□□□ -1.99
SNX6-204ENST00000555541 HNRNPA3P51991 378 aaKnown RBP2.59□□□□□ -1.99
SNX6-204ENST00000555541 EIF4EBP2Q13542 120 aaPredicted RBP2.59□□□□□ -1.99
SNX6-204ENST00000555541 MLF2Q15773 248 aaPredicted RBP2.59□□□□□ -1.99
SNX6-204ENST00000555541 RBBP7Q16576 425 aa2.59□□□□□ -1.99
SNX6-204ENST00000555541 CCBE1Q6UXH8 406 aaPredicted RBP2.59□□□□□ -1.99
SNX6-204ENST00000555541 CERS3Q8IU89 383 aa2.59□□□□□ -1.99
SNX6-204ENST00000555541 CD177Q8N6Q3 437 aa2.59□□□□□ -1.99
SNX6-204ENST00000555541 XXYLT1Q8NBI6 393 aa2.59□□□□□ -1.99
SNX6-204ENST00000555541 OR5M9Q8NGP3 310 aa2.59□□□□□ -1.99
SNX6-204ENST00000555541 AGAP11Q8TF27 550 aa2.59□□□□□ -1.99
SNX6-204ENST00000555541 PYCR2Q96C36 320 aa2.59□□□□□ -1.99
SNX6-204ENST00000555541 NXPE2Q96DL1 559 aa2.59□□□□□ -1.99
SNX6-204ENST00000555541 LURAP1Q96LR2 239 aa2.59□□□□□ -1.99
SNX6-204ENST00000555541 SPATA33Q96N06 139 aa2.59□□□□□ -1.99
SNX6-204ENST00000555541 IL12RB2Q99665 862 aa2.59□□□□□ -1.99
SNX6-204ENST00000555541 HNRNPABQ99729 332 aaKnown RBP2.59□□□□□ -1.99
SNX6-204ENST00000555541 XAB2Q9HCS7 855 aaKnown RBP2.59□□□□□ -1.99
SNX6-204ENST00000555541 CLEC5AQ9NY25 188 aa2.59□□□□□ -1.99
SNX6-204ENST00000555541 PKD2L2Q9NZM6 624 aa2.59□□□□□ -1.99
SNX6-204ENST00000555541 POLKQ9UBT6 870 aa2.59□□□□□ -1.99
SNX6-204ENST00000555541 RNF123Q5XPI4 1314 aa2.59□□□□□ -2
SNX6-204ENST00000555541 A0A1W2PQ72 361 aa2.58□□□□□ -2
SNX6-204ENST00000555541 ZNF749O43361 778 aa2.58□□□□□ -2
SNX6-204ENST00000555541 TNFSF12O43508 249 aa2.58□□□□□ -2
SNX6-204ENST00000555541 STARD3NLO95772 234 aa2.58□□□□□ -2
SNX6-204ENST00000555541 THY1P04216 161 aa2.58□□□□□ -2
SNX6-204ENST00000555541 ADORA3P0DMS8 318 aa2.58□□□□□ -2
SNX6-204ENST00000555541 MYL6BP14649 208 aa2.58□□□□□ -2
SNX6-204ENST00000555541 ACHEP22303 614 aa2.58□□□□□ -2
SNX6-204ENST00000555541 RAB28P51157 221 aa2.58□□□□□ -2
SNX6-204ENST00000555541 CLDN17P56750 224 aa2.58□□□□□ -2
SNX6-204ENST00000555541 ACY1Q03154 408 aa2.58□□□□□ -2
SNX6-204ENST00000555541 SPANXN4Q5MJ08 99 aa2.58□□□□□ -2
SNX6-204ENST00000555541 ERMARDQ5T6L9 678 aa2.58□□□□□ -2
SNX6-204ENST00000555541 TMUB2Q71RG4 321 aa2.58□□□□□ -2
SNX6-204ENST00000555541 BRINP3Q76B58 766 aa2.58□□□□□ -2
SNX6-204ENST00000555541 PLPPR4Q7Z2D5 763 aa2.58□□□□□ -2
SNX6-204ENST00000555541 PRPF39Q86UA1 669 aaKnown RBP2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms