RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.87□□□□□ -1.63
VRK1-203ENST00000555067 CNOT2Q9NZN8 540 aaKnown RBP4.87□□□□□ -1.63
VRK1-203ENST00000555067 POU2F3Q9UKI9 436 aa4.87□□□□□ -1.63
VRK1-203ENST00000555067 KCNS2Q9ULS6 477 aa4.87□□□□□ -1.63
VRK1-203ENST00000555067 PLA2G4CQ9UP65 541 aa4.87□□□□□ -1.63
VRK1-203ENST00000555067 FOXA2Q9Y261 457 aaPredicted RBP4.87□□□□□ -1.63
VRK1-203ENST00000555067 NAALAD2Q9Y3Q0 740 aa4.87□□□□□ -1.63
VRK1-203ENST00000555067 HS3ST1O14792 307 aa4.86□□□□□ -1.63
VRK1-203ENST00000555067 GPRIN2O60269 458 aa4.86□□□□□ -1.63
VRK1-203ENST00000555067 ZNF821O75541 412 aaPredicted RBP4.86□□□□□ -1.63
VRK1-203ENST00000555067 GSRP00390 522 aa4.86□□□□□ -1.63
VRK1-203ENST00000555067 LDLRP01130 860 aa4.86□□□□□ -1.63
VRK1-203ENST00000555067 IGHV2-70P01814 119 aa4.86□□□□□ -1.63
VRK1-203ENST00000555067 APOHP02749 345 aaPredicted RBP4.86□□□□□ -1.63
VRK1-203ENST00000555067 PIK3R1P27986 724 aa4.86□□□□□ -1.63
VRK1-203ENST00000555067 PKLRP30613 574 aa4.86□□□□□ -1.63
VRK1-203ENST00000555067 PTGER3P43115 390 aa4.86□□□□□ -1.63
VRK1-203ENST00000555067 ATP12AP54707 1039 aa4.86□□□□□ -1.63
VRK1-203ENST00000555067 CD81P60033 236 aa4.86□□□□□ -1.63
VRK1-203ENST00000555067 SEC61BP60468 96 aaKnown RBP4.86□□□□□ -1.63
VRK1-203ENST00000555067 ERVK11-1P61568 191 aa4.86□□□□□ -1.63
VRK1-203ENST00000555067 SLC20A2Q08357 652 aa4.86□□□□□ -1.63
VRK1-203ENST00000555067 SNTB2Q13425 540 aaKnown RBP4.86□□□□□ -1.63
VRK1-203ENST00000555067 SNX1Q13596 522 aa4.86□□□□□ -1.63
VRK1-203ENST00000555067 CUL3Q13618 768 aa4.86□□□□□ -1.63
VRK1-203ENST00000555067 STXBP2Q15833 593 aa4.86□□□□□ -1.63
VRK1-203ENST00000555067 NADK2Q4G0N4 442 aa4.86□□□□□ -1.63
VRK1-203ENST00000555067 LRRC23Q53EV4 343 aaPredicted RBP4.86□□□□□ -1.63
VRK1-203ENST00000555067 IRAK1BP1Q5VVH5 260 aa4.86□□□□□ -1.63
VRK1-203ENST00000555067 ARSKQ6UWY0 536 aa4.86□□□□□ -1.63
VRK1-203ENST00000555067 ATG9AQ7Z3C6 839 aa4.86□□□□□ -1.63
VRK1-203ENST00000555067 NFE4Q86UQ8 179 aa4.86□□□□□ -1.63
VRK1-203ENST00000555067 C1orf87Q8N0U7 546 aa4.86□□□□□ -1.63
VRK1-203ENST00000555067 DMBX1Q8NFW5 382 aa4.86□□□□□ -1.63
VRK1-203ENST00000555067 OR56B1Q8NGI3 324 aa4.86□□□□□ -1.63
VRK1-203ENST00000555067 OR52B4Q8NGK2 314 aa4.86□□□□□ -1.63
VRK1-203ENST00000555067 OR5M8Q8NGP6 311 aa4.86□□□□□ -1.63
VRK1-203ENST00000555067 HMGCLL1Q8TB92 370 aa4.86□□□□□ -1.63
VRK1-203ENST00000555067 SLC20A1Q8WUM9 679 aa4.86□□□□□ -1.63
VRK1-203ENST00000555067 CKAP2Q8WWK9 683 aa4.86□□□□□ -1.63
VRK1-203ENST00000555067 ZNF582Q96NG8 517 aaPredicted RBP4.86□□□□□ -1.63
VRK1-203ENST00000555067 HAUS8Q9BT25 410 aa4.86□□□□□ -1.63
VRK1-203ENST00000555067 TRMT61BQ9BVS5 477 aaKnown RBP4.86□□□□□ -1.63
VRK1-203ENST00000555067 SLC2A11Q9BYW1 496 aa4.86□□□□□ -1.63
VRK1-203ENST00000555067 POLR1EQ9GZS1 481 aaKnown RBP4.86□□□□□ -1.63
VRK1-203ENST00000555067 NCOR1P1Q9H4R4 102 aa4.86□□□□□ -1.63
VRK1-203ENST00000555067 TCP11L1Q9NUJ3 509 aa4.86□□□□□ -1.63
VRK1-203ENST00000555067 ZNF510Q9Y2H8 683 aa4.86□□□□□ -1.63
VRK1-203ENST00000555067 A0A0B4J203 849 aa4.85□□□□□ -1.63
VRK1-203ENST00000555067 PRSS51A0A1B0GVH4 220 aa4.85□□□□□ -1.63
VRK1-203ENST00000555067 CTAGE15A4D2H0 777 aa4.85□□□□□ -1.63
VRK1-203ENST00000555067 FAM149AA5PLN7 773 aa4.85□□□□□ -1.63
VRK1-203ENST00000555067 ASPDHA6ND91 283 aa4.85□□□□□ -1.63
VRK1-203ENST00000555067 H0YC42 278 aa4.85□□□□□ -1.63
VRK1-203ENST00000555067 IDH1O75874 414 aaKnown RBP4.85□□□□□ -1.63
VRK1-203ENST00000555067 C9P02748 559 aa4.85□□□□□ -1.63
VRK1-203ENST00000555067 CTAGE8P0CG41 777 aa4.85□□□□□ -1.63
VRK1-203ENST00000555067 EPB41P11171 864 aaKnown RBP4.85□□□□□ -1.63
VRK1-203ENST00000555067 CDH1P12830 882 aa4.85□□□□□ -1.63
VRK1-203ENST00000555067 UGT1A1P22309 533 aa4.85□□□□□ -1.63
VRK1-203ENST00000555067 PRDX6P30041 224 aa4.85□□□□□ -1.63
VRK1-203ENST00000555067 TIMP3P35625 211 aa4.85□□□□□ -1.63
VRK1-203ENST00000555067 USP8P40818 1118 aa4.85□□□□□ -1.63
VRK1-203ENST00000555067 MTIF2P46199 727 aaKnown RBP4.85□□□□□ -1.63
VRK1-203ENST00000555067 OR3A1P47881 315 aa4.85□□□□□ -1.63
VRK1-203ENST00000555067 CLCNKAP51800 687 aa4.85□□□□□ -1.63
VRK1-203ENST00000555067 COG7P83436 770 aa4.85□□□□□ -1.63
VRK1-203ENST00000555067 RELQ04864 619 aaPredicted RBP4.85□□□□□ -1.63
VRK1-203ENST00000555067 DECR1Q16698 335 aa4.85□□□□□ -1.63
VRK1-203ENST00000555067 USH1GQ495M9 461 aa4.85□□□□□ -1.63
VRK1-203ENST00000555067 SPATA46Q5T0L3 261 aa4.85□□□□□ -1.63
VRK1-203ENST00000555067 LCE3CQ5T5A8 94 aa4.85□□□□□ -1.63
VRK1-203ENST00000555067 FIP1L1Q6UN15 594 aaKnown RBP4.85□□□□□ -1.63
VRK1-203ENST00000555067 B3GLCTQ6Y288 498 aa4.85□□□□□ -1.63
VRK1-203ENST00000555067 DGLUCYQ7Z3D6 616 aa4.85□□□□□ -1.63
VRK1-203ENST00000555067 CTAGE6Q86UF2 777 aa4.85□□□□□ -1.63
VRK1-203ENST00000555067 MEX3DQ86XN8 651 aaKnown RBP4.85□□□□□ -1.63
VRK1-203ENST00000555067 LAX1Q8IWV1 398 aa4.85□□□□□ -1.63
VRK1-203ENST00000555067 CTAGE4Q8IX94 777 aa4.85□□□□□ -1.63
VRK1-203ENST00000555067 ZNF679Q8IYX0 411 aa4.85□□□□□ -1.63
VRK1-203ENST00000555067 DSELQ8IZU8 1212 aa4.85□□□□□ -1.63
VRK1-203ENST00000555067 CIARTQ8N365 385 aaPredicted RBP4.85□□□□□ -1.63
VRK1-203ENST00000555067 GCSAMQ8N6F7 178 aa4.85□□□□□ -1.63
VRK1-203ENST00000555067 RASL10BQ96S79 203 aa4.85□□□□□ -1.63
VRK1-203ENST00000555067 UBQLN3Q9H347 655 aa4.85□□□□□ -1.63
VRK1-203ENST00000555067 HHATLQ9HCP6 504 aa4.85□□□□□ -1.63
VRK1-203ENST00000555067 SCRT2Q9NQ03 307 aa4.85□□□□□ -1.63
VRK1-203ENST00000555067 CNGB3Q9NQW8 809 aa4.85□□□□□ -1.63
VRK1-203ENST00000555067 DDX18Q9NVP1 670 aaKnown RBP4.85□□□□□ -1.63
VRK1-203ENST00000555067 RBM28Q9NW13 759 aaKnown RBP4.85□□□□□ -1.63
VRK1-203ENST00000555067 NPAP1Q9NZP6 1156 aa4.85□□□□□ -1.63
VRK1-203ENST00000555067 RCC2Q9P258 522 aaKnown RBP4.85□□□□□ -1.63
VRK1-203ENST00000555067 CAB39Q9Y376 341 aaPredicted RBP4.85□□□□□ -1.63
VRK1-203ENST00000555067 KIAA1217Q5T5P2 1943 aa4.85□□□□□ -1.63
VRK1-203ENST00000555067 A0A087X0K7 114 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 FAM230AA0A1W2PPH8 454 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 LILRA5A6NI73 299 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 ZSCAN5BA6NJL1 495 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 FAM90A26D6RGX4 464 aa4.84□□□□□ -1.63
VRK1-203ENST00000555067 ANKRD28O15084 1053 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms