RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 NSMCE2Q96MF7 247 aa4.9□□□□□ -1.63
PSEN1-211ENST00000554995 DUX5Q96PT3 197 aa4.9□□□□□ -1.63
PSEN1-211ENST00000554995 KCNK16Q96T55 309 aa4.9□□□□□ -1.63
PSEN1-211ENST00000554995 ZPBPQ9BS86 351 aa4.9□□□□□ -1.63
PSEN1-211ENST00000554995 NTMT1Q9BV86 223 aa4.9□□□□□ -1.63
PSEN1-211ENST00000554995 GPN1Q9HCN4 374 aaPredicted RBP4.9□□□□□ -1.63
PSEN1-211ENST00000554995 CD93Q9NPY3 652 aa4.9□□□□□ -1.63
PSEN1-211ENST00000554995 PIGVQ9NUD9 493 aa4.9□□□□□ -1.63
PSEN1-211ENST00000554995 MIS18AQ9NYP9 233 aa4.9□□□□□ -1.63
PSEN1-211ENST00000554995 OR6C2Q9NZP2 312 aa4.9□□□□□ -1.63
PSEN1-211ENST00000554995 PSORS1C1Q9UIG5 152 aa4.9□□□□□ -1.63
PSEN1-211ENST00000554995 TMCC3Q9ULS5 477 aa4.9□□□□□ -1.63
PSEN1-211ENST00000554995 NCKAP1Q9Y2A7 1128 aa4.9□□□□□ -1.63
PSEN1-211ENST00000554995 SH3GLB1Q9Y371 365 aa4.9□□□□□ -1.63
PSEN1-211ENST00000554995 ATP6V0A2Q9Y487 856 aa4.9□□□□□ -1.63
PSEN1-211ENST00000554995 MACROD2A1Z1Q3 448 aa4.89□□□□□ -1.63
PSEN1-211ENST00000554995 LACTBL1A8MY62 500 aa4.89□□□□□ -1.63
PSEN1-211ENST00000554995 RASGRF2O14827 1237 aa4.89□□□□□ -1.63
PSEN1-211ENST00000554995 ATP6V1G1O75348 118 aa4.89□□□□□ -1.63
PSEN1-211ENST00000554995 GRAP2O75791 330 aa4.89□□□□□ -1.63
PSEN1-211ENST00000554995 STBD1O95210 358 aa4.89□□□□□ -1.63
PSEN1-211ENST00000554995 TRIM16O95361 564 aa4.89□□□□□ -1.63
PSEN1-211ENST00000554995 PTBP3O95758 552 aaKnown RBP4.89□□□□□ -1.63
PSEN1-211ENST00000554995 IGKV2-30P06310 120 aa4.89□□□□□ -1.63
PSEN1-211ENST00000554995 CHRNGP07510 517 aa4.89□□□□□ -1.63
PSEN1-211ENST00000554995 CETPP11597 493 aa4.89□□□□□ -1.63
PSEN1-211ENST00000554995 PLA2G2AP14555 144 aa4.89□□□□□ -1.63
PSEN1-211ENST00000554995 KIF5BP33176 963 aa4.89□□□□□ -1.63
PSEN1-211ENST00000554995 HERV-K104P61576 105 aa4.89□□□□□ -1.63
PSEN1-211ENST00000554995 GPR17Q13304 367 aa4.89□□□□□ -1.63
PSEN1-211ENST00000554995 CDH18Q13634 790 aa4.89□□□□□ -1.63
PSEN1-211ENST00000554995 EXT1Q16394 746 aa4.89□□□□□ -1.63
PSEN1-211ENST00000554995 EPC2Q52LR7 807 aa4.89□□□□□ -1.63
PSEN1-211ENST00000554995 TAF1BQ53T94 588 aaPredicted RBP4.89□□□□□ -1.63
PSEN1-211ENST00000554995 TECRLQ5HYJ1 363 aa4.89□□□□□ -1.63
PSEN1-211ENST00000554995 NADSYN1Q6IA69 706 aa4.89□□□□□ -1.63
PSEN1-211ENST00000554995 OR4C11Q6IEV9 310 aa4.89□□□□□ -1.63
PSEN1-211ENST00000554995 CD164L2Q6UWJ8 174 aa4.89□□□□□ -1.63
PSEN1-211ENST00000554995 FOXL2NBQ6ZUU3 175 aa4.89□□□□□ -1.63
PSEN1-211ENST00000554995 RBM23Q86U06 439 aaKnown RBP4.89□□□□□ -1.63
PSEN1-211ENST00000554995 ARL6IP6Q8N6S5 226 aa4.89□□□□□ -1.63
PSEN1-211ENST00000554995 SIDT2Q8NBJ9 832 aaKnown RBP4.89□□□□□ -1.63
PSEN1-211ENST00000554995 OR7A2PQ8NGA2 310 aa4.89□□□□□ -1.63
PSEN1-211ENST00000554995 DPEP2Q9H4A9 486 aa4.89□□□□□ -1.63
PSEN1-211ENST00000554995 C6orf106Q9H6K1 298 aaPredicted RBP4.89□□□□□ -1.63
PSEN1-211ENST00000554995 IL36AQ9UHA7 158 aa4.89□□□□□ -1.63
PSEN1-211ENST00000554995 SH3BGRL2Q9UJC5 107 aa4.89□□□□□ -1.63
PSEN1-211ENST00000554995 NUDCQ9Y266 331 aa4.89□□□□□ -1.63
PSEN1-211ENST00000554995 COLEC10Q9Y6Z7 277 aa4.89□□□□□ -1.63
PSEN1-211ENST00000554995 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.88□□□□□ -1.63
PSEN1-211ENST00000554995 CCDC162PA2VCL2 907 aa4.88□□□□□ -1.63
PSEN1-211ENST00000554995 MTMR11A4FU01 709 aa4.88□□□□□ -1.63
PSEN1-211ENST00000554995 K7EPI3 171 aa4.88□□□□□ -1.63
PSEN1-211ENST00000554995 SLC22A2O15244 555 aa4.88□□□□□ -1.63
PSEN1-211ENST00000554995 SMAD6O43541 496 aaKnown RBP4.88□□□□□ -1.63
PSEN1-211ENST00000554995 KIF5CO60282 957 aa4.88□□□□□ -1.63
PSEN1-211ENST00000554995 SOCS5O75159 536 aa4.88□□□□□ -1.63
PSEN1-211ENST00000554995 GMNNO75496 209 aa4.88□□□□□ -1.63
PSEN1-211ENST00000554995 DFFBO76075 338 aa4.88□□□□□ -1.63
PSEN1-211ENST00000554995 PDGFBP01127 241 aaPredicted RBP4.88□□□□□ -1.63
PSEN1-211ENST00000554995 CXCL10P02778 98 aa4.88□□□□□ -1.63
PSEN1-211ENST00000554995 PGK2P07205 417 aa4.88□□□□□ -1.63
PSEN1-211ENST00000554995 B4GALT1P15291 398 aa4.88□□□□□ -1.63
PSEN1-211ENST00000554995 ZNF18P17022 549 aa4.88□□□□□ -1.63
PSEN1-211ENST00000554995 ARF4P18085 180 aaPredicted RBP4.88□□□□□ -1.63
PSEN1-211ENST00000554995 RBMS1P29558 406 aaKnown RBP4.88□□□□□ -1.63
PSEN1-211ENST00000554995 TNFSF10P50591 281 aa4.88□□□□□ -1.63
PSEN1-211ENST00000554995 DNA2P51530 1060 aa4.88□□□□□ -1.63
PSEN1-211ENST00000554995 CLCN4P51793 760 aa4.88□□□□□ -1.63
PSEN1-211ENST00000554995 KARSQ15046 597 aaKnown RBP4.88□□□□□ -1.63
PSEN1-211ENST00000554995 INAQ16352 499 aa4.88□□□□□ -1.63
PSEN1-211ENST00000554995 PDLIM3Q53GG5 364 aaPredicted RBP4.88□□□□□ -1.63
PSEN1-211ENST00000554995 XKR6Q5GH73 641 aa4.88□□□□□ -1.63
PSEN1-211ENST00000554995 LCN1P1Q5VSP4 162 aa4.88□□□□□ -1.63
PSEN1-211ENST00000554995 G2E3Q7L622 706 aa4.88□□□□□ -1.63
PSEN1-211ENST00000554995 TAF8Q7Z7C8 310 aa4.88□□□□□ -1.63
PSEN1-211ENST00000554995 NFE4Q86UQ8 179 aa4.88□□□□□ -1.63
PSEN1-211ENST00000554995 ZC3H3Q8IXZ2 948 aaKnown RBP4.88□□□□□ -1.63
PSEN1-211ENST00000554995 DMBX1Q8NFW5 382 aa4.88□□□□□ -1.63
PSEN1-211ENST00000554995 NUDCD2Q8WVJ2 157 aa4.88□□□□□ -1.63
PSEN1-211ENST00000554995 SEPT8Q92599 483 aa4.88□□□□□ -1.63
PSEN1-211ENST00000554995 TMEM143Q96AN5 459 aa4.88□□□□□ -1.63
PSEN1-211ENST00000554995 ZNF354BQ96LW1 612 aa4.88□□□□□ -1.63
PSEN1-211ENST00000554995 GUCD1Q96NT3 240 aa4.88□□□□□ -1.63
PSEN1-211ENST00000554995 PIGQQ9BRB3 760 aa4.88□□□□□ -1.63
PSEN1-211ENST00000554995 LRRC2Q9BYS8 371 aa4.88□□□□□ -1.63
PSEN1-211ENST00000554995 NYXQ9GZU5 481 aa4.88□□□□□ -1.63
PSEN1-211ENST00000554995 FLRT3Q9NZU0 649 aa4.88□□□□□ -1.63
PSEN1-211ENST00000554995 NDUFA13Q9P0J0 144 aa4.88□□□□□ -1.63
PSEN1-211ENST00000554995 C19orf25Q9UFG5 118 aaPredicted RBP4.88□□□□□ -1.63
PSEN1-211ENST00000554995 MAN1B1Q9UKM7 699 aa4.88□□□□□ -1.63
PSEN1-211ENST00000554995 ATP8B3O60423 1300 aa4.88□□□□□ -1.63
PSEN1-211ENST00000554995 SNURFLB1AK76 121 aa4.87□□□□□ -1.63
PSEN1-211ENST00000554995 CPLX1O14810 134 aa4.87□□□□□ -1.63
PSEN1-211ENST00000554995 CHUKO15111 745 aa4.87□□□□□ -1.63
PSEN1-211ENST00000554995 SMPD2O60906 423 aa4.87□□□□□ -1.63
PSEN1-211ENST00000554995 GLRA3O75311 464 aa4.87□□□□□ -1.63
PSEN1-211ENST00000554995 CLN5O75503 358 aa4.87□□□□□ -1.63
PSEN1-211ENST00000554995 BMP15O95972 392 aa4.87□□□□□ -1.63
PSEN1-211ENST00000554995 CEACAM8P31997 349 aaPredicted RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms