RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 NAGSQ8N159 534 aa16.72■□□□□ 0.27
SHOX-204ENST00000554971 EID2Q8N6I1 236 aa16.72■□□□□ 0.27
SHOX-204ENST00000554971 FAM46DQ8NEK8 389 aa16.72■□□□□ 0.27
SHOX-204ENST00000554971 BAHD1Q8TBE0 780 aaPredicted RBP16.72■□□□□ 0.27
SHOX-204ENST00000554971 YTHDF1Q9BYJ9 559 aaKnown RBP16.72■□□□□ 0.27
SHOX-204ENST00000554971 PRDM8Q9NQV8 689 aa16.72■□□□□ 0.27
SHOX-204ENST00000554971 SCHIP1Q9P0W5 487 aaPredicted RBP16.72■□□□□ 0.27
SHOX-204ENST00000554971 OPTCQ9UBM4 332 aa16.72■□□□□ 0.27
SHOX-204ENST00000554971 WDR37Q9Y2I8 494 aa16.72■□□□□ 0.27
SHOX-204ENST00000554971 ANGPTL3Q9Y5C1 460 aa16.72■□□□□ 0.27
SHOX-204ENST00000554971 DNMT3AQ9Y6K1 912 aaPredicted RBP16.72■□□□□ 0.27
SHOX-204ENST00000554971 U3KQA8 63 aa16.72■□□□□ 0.27
SHOX-204ENST00000554971 SOCS2O14508 198 aa16.72■□□□□ 0.27
SHOX-204ENST00000554971 ANKRD28O15084 1053 aa16.72■□□□□ 0.27
SHOX-204ENST00000554971 BMP10O95393 424 aa16.72■□□□□ 0.27
SHOX-204ENST00000554971 OR56A5P0C7T3 313 aa16.72■□□□□ 0.27
SHOX-204ENST00000554971 MYF5P13349 255 aa16.72■□□□□ 0.27
SHOX-204ENST00000554971 CKMT2P17540 419 aa16.72■□□□□ 0.27
SHOX-204ENST00000554971 ITGB6P18564 788 aa16.72■□□□□ 0.27
SHOX-204ENST00000554971 CCR7P32248 378 aa16.72■□□□□ 0.27
SHOX-204ENST00000554971 CLCNKAP51800 687 aa16.72■□□□□ 0.27
SHOX-204ENST00000554971 GK3PQ14409 553 aa16.72■□□□□ 0.27
SHOX-204ENST00000554971 NR6A1Q15406 480 aa16.72■□□□□ 0.27
SHOX-204ENST00000554971 TIGD2Q4W5G0 525 aa16.72■□□□□ 0.27
SHOX-204ENST00000554971 METRNLQ641Q3 311 aa16.72■□□□□ 0.27
SHOX-204ENST00000554971 DLEU7Q6UYE1 221 aa16.72■□□□□ 0.27
SHOX-204ENST00000554971 PIP4P1Q86T03 277 aa16.72■□□□□ 0.27
SHOX-204ENST00000554971 GKN2Q86XP6 184 aa16.72■□□□□ 0.27
SHOX-204ENST00000554971 TCAIMQ8N3R3 496 aa16.72■□□□□ 0.27
SHOX-204ENST00000554971 SDR16C5Q8N3Y7 309 aa16.72■□□□□ 0.27
SHOX-204ENST00000554971 CBR4Q8N4T8 237 aa16.72■□□□□ 0.27
SHOX-204ENST00000554971 TRIML2Q8N7C3 387 aa16.72■□□□□ 0.27
SHOX-204ENST00000554971 OR52E4Q8NGH9 312 aa16.72■□□□□ 0.27
SHOX-204ENST00000554971 ESAMQ96AP7 390 aa16.72■□□□□ 0.27
SHOX-204ENST00000554971 CCDC115Q96NT0 180 aa16.72■□□□□ 0.27
SHOX-204ENST00000554971 CCM2Q9BSQ5 444 aa16.72■□□□□ 0.27
SHOX-204ENST00000554971 BDH2Q9BUT1 245 aa16.72■□□□□ 0.27
SHOX-204ENST00000554971 C1orf50Q9BV19 199 aa16.72■□□□□ 0.27
SHOX-204ENST00000554971 OSGEPL1Q9H4B0 414 aa16.72■□□□□ 0.27
SHOX-204ENST00000554971 ZNF639Q9UID6 485 aa16.72■□□□□ 0.27
SHOX-204ENST00000554971 PCOLCE2Q9UKZ9 415 aa16.72■□□□□ 0.27
SHOX-204ENST00000554971 CCL27Q9Y4X3 112 aa16.72■□□□□ 0.27
SHOX-204ENST00000554971 AKAP13Q12802 2813 aa16.72■□□□□ 0.27
SHOX-204ENST00000554971 RNF103-CHMP3A0A140T963 221 aa16.71■□□□□ 0.27
SHOX-204ENST00000554971 C17orf113A0A1B0GUU1 675 aa16.71■□□□□ 0.27
SHOX-204ENST00000554971 TRIM64CA6NLI5 447 aa16.71■□□□□ 0.27
SHOX-204ENST00000554971 K7EPI3 171 aa16.71■□□□□ 0.27
SHOX-204ENST00000554971 FLRT2O43155 660 aa16.71■□□□□ 0.27
SHOX-204ENST00000554971 NOBOXO60393 691 aa16.71■□□□□ 0.27
SHOX-204ENST00000554971 KATNA1O75449 491 aa16.71■□□□□ 0.27
SHOX-204ENST00000554971 GMNNO75496 209 aa16.71■□□□□ 0.27
SHOX-204ENST00000554971 LDLRP01130 860 aa16.71■□□□□ 0.27
SHOX-204ENST00000554971 IL6P05231 212 aa16.71■□□□□ 0.27
SHOX-204ENST00000554971 VARSP26640 1264 aaKnown RBP16.71■□□□□ 0.27
SHOX-204ENST00000554971 GRK6P43250 576 aa16.71■□□□□ 0.27
SHOX-204ENST00000554971 ALDH3B2P48448 385 aa16.71■□□□□ 0.27
SHOX-204ENST00000554971 MERTKQ12866 999 aa16.71■□□□□ 0.27
SHOX-204ENST00000554971 RABL3Q5HYI8 236 aa16.71■□□□□ 0.27
SHOX-204ENST00000554971 C6orf132Q5T0Z8 1188 aa16.71■□□□□ 0.27
SHOX-204ENST00000554971 NAXDQ8IW45 347 aa16.71■□□□□ 0.27
SHOX-204ENST00000554971 SLC35F3Q8IY50 421 aa16.71■□□□□ 0.27
SHOX-204ENST00000554971 METTL25Q8N6Q8 603 aa16.71■□□□□ 0.27
SHOX-204ENST00000554971 NETO1Q8TDF5 533 aa16.71■□□□□ 0.27
SHOX-204ENST00000554971 ADAMTS16Q8TE57 1224 aa16.71■□□□□ 0.27
SHOX-204ENST00000554971 RHBDF1Q96CC6 855 aa16.71■□□□□ 0.27
SHOX-204ENST00000554971 NSMCE2Q96MF7 247 aa16.71■□□□□ 0.27
SHOX-204ENST00000554971 CGREF1Q99674 301 aa16.71■□□□□ 0.27
SHOX-204ENST00000554971 DPEP2Q9H4A9 486 aa16.71■□□□□ 0.27
SHOX-204ENST00000554971 PCDHGB4Q9UN71 923 aa16.71■□□□□ 0.27
SHOX-204ENST00000554971 PCDHGB5Q9Y5G0 923 aa16.71■□□□□ 0.27
SHOX-204ENST00000554971 TRIM64A6NGJ6 449 aa16.7■□□□□ 0.26
SHOX-204ENST00000554971 TAPBPO15533 448 aa16.7■□□□□ 0.26
SHOX-204ENST00000554971 ULK1O75385 1050 aa16.7■□□□□ 0.26
SHOX-204ENST00000554971 ANXA6P08133 673 aa16.7■□□□□ 0.26
SHOX-204ENST00000554971 G6PDP11413 515 aa16.7■□□□□ 0.26
SHOX-204ENST00000554971 CDH1P12830 882 aa16.7■□□□□ 0.26
SHOX-204ENST00000554971 ATP6V1B1P15313 513 aa16.7■□□□□ 0.26
SHOX-204ENST00000554971 PDHA2P29803 388 aa16.7■□□□□ 0.26
SHOX-204ENST00000554971 ARL1P40616 181 aaPredicted RBP16.7■□□□□ 0.26
SHOX-204ENST00000554971 SUZ12Q15022 739 aaKnown RBP16.7■□□□□ 0.26
SHOX-204ENST00000554971 SLC36A3Q495N2 470 aa16.7■□□□□ 0.26
SHOX-204ENST00000554971 CACHD1Q5VU97 1274 aa16.7■□□□□ 0.26
SHOX-204ENST00000554971 SCIMPQ6UWF3 145 aa16.7■□□□□ 0.26
SHOX-204ENST00000554971 CFAP206Q8IYR0 622 aa16.7■□□□□ 0.26
SHOX-204ENST00000554971 SETD7Q8WTS6 366 aaKnown RBP16.7■□□□□ 0.26
SHOX-204ENST00000554971 DTNBP1Q96EV8 351 aa16.7■□□□□ 0.26
SHOX-204ENST00000554971 MAGEB10Q96LZ2 347 aaPredicted RBP16.7■□□□□ 0.26
SHOX-204ENST00000554971 ADI1Q9BV57 179 aa16.7■□□□□ 0.26
SHOX-204ENST00000554971 GRIP2Q9C0E4 1043 aa16.7■□□□□ 0.26
SHOX-204ENST00000554971 WWOXQ9NZC7 414 aa16.7■□□□□ 0.26
SHOX-204ENST00000554971 GMPR2Q9P2T1 348 aaKnown RBP16.7■□□□□ 0.26
SHOX-204ENST00000554971 FRYQ5TBA9 3013 aa16.7■□□□□ 0.26
SHOX-204ENST00000554971 A0A087WXM4 84 aa16.7■□□□□ 0.26
SHOX-204ENST00000554971 B4DGG1 531 aa16.7■□□□□ 0.26
SHOX-204ENST00000554971 C9JVG2 144 aa16.7■□□□□ 0.26
SHOX-204ENST00000554971 QSOX1O00391 747 aa16.7■□□□□ 0.26
SHOX-204ENST00000554971 ACOX3O15254 700 aa16.7■□□□□ 0.26
SHOX-204ENST00000554971 KCNH1O95259 989 aa16.7■□□□□ 0.26
SHOX-204ENST00000554971 TRIM16O95361 564 aa16.7■□□□□ 0.26
SHOX-204ENST00000554971 EPB42P16452 691 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms