RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 GLOD5A6NK44 160 aa11.43□□□□□ -0.58
XRCC3-208ENST00000554811 ARHGEF33A8MVX0 844 aa11.43□□□□□ -0.58
XRCC3-208ENST00000554811 PRAMEF4O60810 478 aa11.43□□□□□ -0.58
XRCC3-208ENST00000554811 NME6O75414 186 aaPredicted RBP11.43□□□□□ -0.58
XRCC3-208ENST00000554811 C9P02748 559 aa11.43□□□□□ -0.58
XRCC3-208ENST00000554811 RNF144AP50876 292 aaPredicted RBP11.43□□□□□ -0.58
XRCC3-208ENST00000554811 B4GALNT1Q00973 533 aa11.43□□□□□ -0.58
XRCC3-208ENST00000554811 IFITM3Q01628 133 aa11.43□□□□□ -0.58
XRCC3-208ENST00000554811 ILF2Q12905 390 aaKnown RBP11.43□□□□□ -0.58
XRCC3-208ENST00000554811 INAVAQ3KP66 663 aa11.43□□□□□ -0.58
XRCC3-208ENST00000554811 TPRG1LQ5T0D9 272 aa11.43□□□□□ -0.58
XRCC3-208ENST00000554811 DEPDC1Q5TB30 811 aa11.43□□□□□ -0.58
XRCC3-208ENST00000554811 PRAMEF9Q5VWM5 478 aa11.43□□□□□ -0.58
XRCC3-208ENST00000554811 TYW3Q6IPR3 259 aaKnown RBP11.43□□□□□ -0.58
XRCC3-208ENST00000554811 AMER2Q8N7J2 671 aa11.43□□□□□ -0.58
XRCC3-208ENST00000554811 TBCCD1Q9NVR7 557 aa11.43□□□□□ -0.58
XRCC3-208ENST00000554811 ASF1AQ9Y294 204 aa11.43□□□□□ -0.58
XRCC3-208ENST00000554811 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.43□□□□□ -0.58
XRCC3-208ENST00000554811 TTC34A8MYJ7 566 aa11.43□□□□□ -0.58
XRCC3-208ENST00000554811 LOC110117498-PIK3R3F6TDL0 507 aa11.43□□□□□ -0.58
XRCC3-208ENST00000554811 TMEM189-UBE2V1I3L0A0 370 aa11.43□□□□□ -0.58
XRCC3-208ENST00000554811 YY2O15391 372 aa11.43□□□□□ -0.58
XRCC3-208ENST00000554811 TEX28O15482 410 aa11.43□□□□□ -0.58
XRCC3-208ENST00000554811 HOXA2O43364 376 aa11.43□□□□□ -0.58
XRCC3-208ENST00000554811 ASNA1O43681 348 aa11.43□□□□□ -0.58
XRCC3-208ENST00000554811 RFPL2O75678 378 aa11.43□□□□□ -0.58
XRCC3-208ENST00000554811 ZDHHC11BP0C7U3 371 aa11.43□□□□□ -0.58
XRCC3-208ENST00000554811 SCARB2Q14108 478 aa11.43□□□□□ -0.58
XRCC3-208ENST00000554811 MRPL58Q14197 206 aaKnown RBP11.43□□□□□ -0.58
XRCC3-208ENST00000554811 GTF2IRD2BQ6EKJ0 949 aa11.43□□□□□ -0.58
XRCC3-208ENST00000554811 LAIR2Q6ISS4 152 aa11.43□□□□□ -0.58
XRCC3-208ENST00000554811 GTF2IRD2Q86UP8 949 aa11.43□□□□□ -0.58
XRCC3-208ENST00000554811 NPAS3Q8IXF0 933 aa11.43□□□□□ -0.58
XRCC3-208ENST00000554811 AQP11Q8NBQ7 271 aa11.43□□□□□ -0.58
XRCC3-208ENST00000554811 CHPT1Q8WUD6 406 aa11.43□□□□□ -0.58
XRCC3-208ENST00000554811 S100ZQ8WXG8 99 aa11.43□□□□□ -0.58
XRCC3-208ENST00000554811 ARMC5Q96C12 935 aa11.43□□□□□ -0.58
XRCC3-208ENST00000554811 NIPSNAP1Q9BPW8 284 aa11.43□□□□□ -0.58
XRCC3-208ENST00000554811 NTMT1Q9BV86 223 aa11.43□□□□□ -0.58
XRCC3-208ENST00000554811 C1QTNF3Q9BXJ4 246 aa11.43□□□□□ -0.58
XRCC3-208ENST00000554811 TRIT1Q9H3H1 467 aaKnown RBP11.43□□□□□ -0.58
XRCC3-208ENST00000554811 INIPQ9NRY2 104 aa11.43□□□□□ -0.58
XRCC3-208ENST00000554811 SLC6A14Q9UN76 642 aa11.43□□□□□ -0.58
XRCC3-208ENST00000554811 SERPINB7O75635 380 aa11.42□□□□□ -0.58
XRCC3-208ENST00000554811 MED26O95402 600 aa11.42□□□□□ -0.58
XRCC3-208ENST00000554811 ATP6V1E1P36543 226 aa11.42□□□□□ -0.58
XRCC3-208ENST00000554811 NKX3-2P78367 333 aa11.42□□□□□ -0.58
XRCC3-208ENST00000554811 KIAA0040Q15053 153 aa11.42□□□□□ -0.58
XRCC3-208ENST00000554811 ZNF404Q494X3 552 aa11.42□□□□□ -0.58
XRCC3-208ENST00000554811 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.42□□□□□ -0.58
XRCC3-208ENST00000554811 RBM12BQ8IXT5 1001 aaKnown RBP11.42□□□□□ -0.58
XRCC3-208ENST00000554811 ZZZ3Q8IYH5 903 aa11.42□□□□□ -0.58
XRCC3-208ENST00000554811 UBASH3BQ8TF42 649 aa11.42□□□□□ -0.58
XRCC3-208ENST00000554811 XAGE5Q8WWM1 108 aa11.42□□□□□ -0.58
XRCC3-208ENST00000554811 ITPAQ9BY32 194 aa11.42□□□□□ -0.58
XRCC3-208ENST00000554811 GPN2Q9H9Y4 310 aaPredicted RBP11.42□□□□□ -0.58
XRCC3-208ENST00000554811 RUVBL1Q9Y265 456 aaKnown RBP11.42□□□□□ -0.58
XRCC3-208ENST00000554811 CCL27Q9Y4X3 112 aa11.42□□□□□ -0.58
XRCC3-208ENST00000554811 CHD5Q8TDI0 1954 aa11.42□□□□□ -0.58
XRCC3-208ENST00000554811 SCN10AQ9Y5Y9 1956 aa11.42□□□□□ -0.58
XRCC3-208ENST00000554811 ASCC3Q8N3C0 2202 aaKnown RBP11.42□□□□□ -0.58
XRCC3-208ENST00000554811 TRAV19A0A0A6YYK7 116 aa11.42□□□□□ -0.58
XRCC3-208ENST00000554811 PCDH17O14917 1159 aa11.42□□□□□ -0.58
XRCC3-208ENST00000554811 ERAL1O75616 437 aaKnown RBP11.42□□□□□ -0.58
XRCC3-208ENST00000554811 C8AP07357 584 aa11.42□□□□□ -0.58
XRCC3-208ENST00000554811 IGFBP1P08833 259 aaPredicted RBP11.42□□□□□ -0.58
XRCC3-208ENST00000554811 CCDC159P0C7I6 412 aa11.42□□□□□ -0.58
XRCC3-208ENST00000554811 WASP42768 502 aa11.42□□□□□ -0.58
XRCC3-208ENST00000554811 RFX3P48380 749 aa11.42□□□□□ -0.58
XRCC3-208ENST00000554811 COPZ1P61923 177 aa11.42□□□□□ -0.58
XRCC3-208ENST00000554811 SRSF11Q05519 484 aaKnown RBP11.42□□□□□ -0.58
XRCC3-208ENST00000554811 PPIGQ13427 754 aaKnown RBP eCLIP11.42□□□□□ -0.585e-6■■■■□ 19.9
XRCC3-208ENST00000554811 MPPE1Q53F39 396 aa11.42□□□□□ -0.58
XRCC3-208ENST00000554811 ARMC4Q5T2S8 1044 aa11.42□□□□□ -0.58
XRCC3-208ENST00000554811 ANKRD13BQ86YJ7 626 aa11.42□□□□□ -0.58
XRCC3-208ENST00000554811 ZNF675Q8TD23 568 aa11.42□□□□□ -0.58
XRCC3-208ENST00000554811 DOK4Q8TEW6 326 aa11.42□□□□□ -0.58
XRCC3-208ENST00000554811 NEIL2Q969S2 332 aa11.42□□□□□ -0.58
XRCC3-208ENST00000554811 DACT3Q96B18 629 aaPredicted RBP11.42□□□□□ -0.58
XRCC3-208ENST00000554811 SLC29A3Q9BZD2 475 aa11.42□□□□□ -0.58
XRCC3-208ENST00000554811 EQTNQ9NQ60 294 aa11.42□□□□□ -0.58
XRCC3-208ENST00000554811 TMEM184CQ9NVA4 438 aa11.42□□□□□ -0.58
XRCC3-208ENST00000554811 TMCC3Q9ULS5 477 aa11.42□□□□□ -0.58
XRCC3-208ENST00000554811 TMA7Q9Y2S6 64 aaKnown RBP11.42□□□□□ -0.58
XRCC3-208ENST00000554811 SNX4O95219 450 aa11.42□□□□□ -0.58
XRCC3-208ENST00000554811 GADD45GO95257 159 aa11.42□□□□□ -0.58
XRCC3-208ENST00000554811 BCHEP06276 602 aa11.42□□□□□ -0.58
XRCC3-208ENST00000554811 C8GP07360 202 aa11.42□□□□□ -0.58
XRCC3-208ENST00000554811 NAT1P18440 290 aa11.42□□□□□ -0.58
XRCC3-208ENST00000554811 ITIH1P19827 911 aa11.42□□□□□ -0.58
XRCC3-208ENST00000554811 NTHL1P78549 312 aa11.42□□□□□ -0.58
XRCC3-208ENST00000554811 ELP6Q0PNE2 266 aa11.42□□□□□ -0.58
XRCC3-208ENST00000554811 KRT33BQ14525 404 aa11.42□□□□□ -0.58
XRCC3-208ENST00000554811 GRIN2CQ14957 1233 aa11.42□□□□□ -0.58
XRCC3-208ENST00000554811 ZXDCQ2QGD7 858 aaPredicted RBP11.42□□□□□ -0.58
XRCC3-208ENST00000554811 DHRS4L2Q6PKH6 230 aa11.42□□□□□ -0.58
XRCC3-208ENST00000554811 EIF3MQ7L2H7 374 aaKnown RBP11.42□□□□□ -0.58
XRCC3-208ENST00000554811 DTX3Q8N9I9 347 aa11.42□□□□□ -0.58
XRCC3-208ENST00000554811 WDR48Q8TAF3 677 aa11.42□□□□□ -0.58
XRCC3-208ENST00000554811 MYDGFQ969H8 173 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms