RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 STXBP1P61764 594 aaKnown RBP7.31□□□□□ -1.24
TDP1-209ENST00000554180 PPP1CAP62136 330 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 RGS1Q08116 209 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 TGM3Q08188 693 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 RCAN2Q14206 197 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 PCM1Q15154 2024 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 ZIC1Q15915 447 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 DPY19L1Q2PZI1 675 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 LACTB2Q53H82 288 aaPredicted RBP7.31□□□□□ -1.24
TDP1-209ENST00000554180 COQ5Q5HYK3 327 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 MANEAQ5SRI9 462 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 NOXRED1Q6NXP6 359 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 GUSBP11Q6P575 273 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 CYP20A1Q6UW02 462 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 ZNF771Q7L3S4 317 aaPredicted RBP7.31□□□□□ -1.24
TDP1-209ENST00000554180 COMMD6Q7Z4G1 85 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 VN1R4Q7Z5H5 301 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 ASPGQ86U10 573 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 NUDT13Q86X67 352 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 TREML1Q86YW5 311 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 PLD3Q8IV08 490 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 FAM20CQ8IXL6 584 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 EID2Q8N6I1 236 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 C1orf52Q8N6N3 182 aaKnown RBP7.31□□□□□ -1.24
TDP1-209ENST00000554180 CAMKVQ8NCB2 501 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 OR2L5Q8NG80 312 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 OR2I1PQ8NGU4 316 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 NT5CQ8TCD5 201 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 SLC13A3Q8WWT9 602 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 NCSTNQ92542 709 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 TMEM131Q92545 1883 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 RERGQ96A58 199 aaPredicted RBP7.31□□□□□ -1.24
TDP1-209ENST00000554180 RGMAQ96B86 450 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 TM4SF19Q96DZ7 209 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 APIPQ96GX9 242 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 MARK4Q96L34 752 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 MAP3K3Q99759 626 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 C1orf50Q9BV19 199 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 SLC25A23Q9BV35 468 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 MRPL1Q9BYD6 325 aaKnown RBP7.31□□□□□ -1.24
TDP1-209ENST00000554180 NLNQ9BYT8 704 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 SLC6A16Q9GZN6 736 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 ROGDIQ9GZN7 287 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 REXO4Q9GZR2 422 aaKnown RBP7.31□□□□□ -1.24
TDP1-209ENST00000554180 SMOC1Q9H4F8 434 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 PRM3Q9NNZ6 103 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 ENAMQ9NRM1 1142 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 MCM8Q9UJA3 840 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 KLHL20Q9Y2M5 609 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 EP300Q09472 2414 aaPredicted RBP7.31□□□□□ -1.24
TDP1-209ENST00000554180 HEATR5BQ9P2D3 2071 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 LAMA1P25391 3075 aa7.31□□□□□ -1.24
TDP1-209ENST00000554180 WDFY4Q6ZS81 3184 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 A0A088AWK7 358 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 FAM234BA2RU67 622 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 CPED1A4D0V7 1026 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 LRIT2A6NDA9 550 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 ERICH4A6NGS2 130 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 PLPP1O14494 284 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 PCDH7O60245 1069 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 NRP2O60462 931 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 SRPX2O60687 465 aaPredicted RBP7.3□□□□□ -1.24
TDP1-209ENST00000554180 SLC22A3O75751 556 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 SCELO95171 688 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 CBX6O95503 412 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 CPNE6O95741 557 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 LMNAP02545 664 aaKnown RBP7.3□□□□□ -1.24
TDP1-209ENST00000554180 SNRPB2P08579 225 aaKnown RBP7.3□□□□□ -1.24
TDP1-209ENST00000554180 ANXA4P09525 319 aaPredicted RBP7.3□□□□□ -1.24
TDP1-209ENST00000554180 ESRRAP11474 423 aaPredicted RBP7.3□□□□□ -1.24
TDP1-209ENST00000554180 COX4I1P13073 169 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 HOXB3P14651 431 aaPredicted RBP7.3□□□□□ -1.24
TDP1-209ENST00000554180 PVRP15151 417 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 SDC1P18827 310 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 PRPS1L1P21108 318 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 ZNF10P21506 573 aaPredicted RBP7.3□□□□□ -1.24
TDP1-209ENST00000554180 HNRNPH1P31943 449 aaKnown RBP7.3□□□□□ -1.24
TDP1-209ENST00000554180 CSF2RBP32927 897 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 BSGP35613 385 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 RPL3P39023 403 aaKnown RBP7.3□□□□□ -1.24
TDP1-209ENST00000554180 MLLT3P42568 568 aaPredicted RBP7.3□□□□□ -1.24
TDP1-209ENST00000554180 PPM1FP49593 454 aaPredicted RBP7.3□□□□□ -1.24
TDP1-209ENST00000554180 GFERP55789 205 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 CLDN8P56748 225 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 TRA2BP62995 288 aaKnown RBP7.3□□□□□ -1.24
TDP1-209ENST00000554180 CYP4F2P78329 520 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 HSD11B2P80365 405 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 DAB2P98082 770 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 CYP4F3Q08477 520 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 ZNF763Q0D2J5 394 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 HYAL2Q12891 473 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 CYLC2Q14093 348 aaPredicted RBP7.3□□□□□ -1.24
TDP1-209ENST00000554180 CCDC6Q16204 474 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 CSRP2Q16527 193 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 AMZ1Q400G9 498 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 AGKQ53H12 422 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 NKAIN2Q5VXU1 208 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 NIPAL1Q6NVV3 410 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 FBXO42Q6P3S6 717 aa7.3□□□□□ -1.24
TDP1-209ENST00000554180 TMEM71Q6P5X7 295 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms