RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 IGHEP01854 428 aa17.54■□□□□ 0.4
PRPF40B-216ENST00000552301 SLCO1A2P46721 670 aa17.54■□□□□ 0.4
PRPF40B-216ENST00000552301 PIK3CGP48736 1102 aa17.54■□□□□ 0.4
PRPF40B-216ENST00000552301 FOXL2P58012 376 aa17.54■□□□□ 0.4
PRPF40B-216ENST00000552301 ATP1A4Q13733 1029 aa17.54■□□□□ 0.4
PRPF40B-216ENST00000552301 RBBP7Q16576 425 aa17.54■□□□□ 0.4
PRPF40B-216ENST00000552301 NIPAL1Q6NVV3 410 aa17.54■□□□□ 0.4
PRPF40B-216ENST00000552301 WDR93Q6P2C0 686 aa17.54■□□□□ 0.4
PRPF40B-216ENST00000552301 PCSK4Q6UW60 755 aa17.54■□□□□ 0.4
PRPF40B-216ENST00000552301 TEX9Q8N6V9 391 aa17.54■□□□□ 0.4
PRPF40B-216ENST00000552301 PTGR2Q8N8N7 351 aaPredicted RBP17.54■□□□□ 0.4
PRPF40B-216ENST00000552301 ANKRD53Q8N9V6 530 aa17.54■□□□□ 0.4
PRPF40B-216ENST00000552301 NT5CQ8TCD5 201 aa17.54■□□□□ 0.4
PRPF40B-216ENST00000552301 ACMSDQ8TDX5 336 aa17.54■□□□□ 0.4
PRPF40B-216ENST00000552301 ASB1Q9Y576 335 aa17.54■□□□□ 0.4
PRPF40B-216ENST00000552301 ANKDD1BA6NHY2 528 aa17.53■□□□□ 0.4
PRPF40B-216ENST00000552301 VSTM2BA6NLU5 285 aa17.53■□□□□ 0.4
PRPF40B-216ENST00000552301 MKRN2OSH3BPM6 223 aa17.53■□□□□ 0.4
PRPF40B-216ENST00000552301 FFAR3O14843 346 aa17.53■□□□□ 0.4
PRPF40B-216ENST00000552301 GPR42O15529 346 aa17.53■□□□□ 0.4
PRPF40B-216ENST00000552301 KLK8O60259 260 aa17.53■□□□□ 0.4
PRPF40B-216ENST00000552301 KLHL18O94889 574 aa17.53■□□□□ 0.4
PRPF40B-216ENST00000552301 SHBGP04278 402 aa17.53■□□□□ 0.4
PRPF40B-216ENST00000552301 UMODP07911 640 aa17.53■□□□□ 0.4
PRPF40B-216ENST00000552301 SERPINA6P08185 405 aa17.53■□□□□ 0.4
PRPF40B-216ENST00000552301 ZGLP1P0C6A0 271 aa17.53■□□□□ 0.4
PRPF40B-216ENST00000552301 ALOX12P18054 663 aa17.53■□□□□ 0.4
PRPF40B-216ENST00000552301 KRT15P19012 456 aa17.53■□□□□ 0.4
PRPF40B-216ENST00000552301 HPDP32754 393 aaPredicted RBP17.53■□□□□ 0.4
PRPF40B-216ENST00000552301 DEKP35659 375 aaKnown RBP17.53■□□□□ 0.4
PRPF40B-216ENST00000552301 HSD17B3P37058 310 aa17.53■□□□□ 0.4
PRPF40B-216ENST00000552301 STXBP1P61764 594 aaKnown RBP17.53■□□□□ 0.4
PRPF40B-216ENST00000552301 KCNAB2Q13303 367 aa17.53■□□□□ 0.4
PRPF40B-216ENST00000552301 DOC2AQ14183 400 aa17.53■□□□□ 0.4
PRPF40B-216ENST00000552301 NAA30Q147X3 362 aaPredicted RBP17.53■□□□□ 0.4
PRPF40B-216ENST00000552301 ERCC6LQ2NKX8 1250 aa17.53■□□□□ 0.4
PRPF40B-216ENST00000552301 LCA5Q86VQ0 697 aa17.53■□□□□ 0.4
PRPF40B-216ENST00000552301 MYLK4Q86YV6 388 aaPredicted RBP17.53■□□□□ 0.4
PRPF40B-216ENST00000552301 APLFQ8IW19 511 aaPredicted RBP17.53■□□□□ 0.4
PRPF40B-216ENST00000552301 AMER3Q8N944 861 aa17.53■□□□□ 0.4
PRPF40B-216ENST00000552301 TMEM102Q8N9M5 508 aaPredicted RBP17.53■□□□□ 0.4
PRPF40B-216ENST00000552301 UBE2E3Q969T4 207 aa17.53■□□□□ 0.4
PRPF40B-216ENST00000552301 MOCOSQ96EN8 888 aa17.53■□□□□ 0.4
PRPF40B-216ENST00000552301 SEC16BQ96JE7 1060 aa17.53■□□□□ 0.4
PRPF40B-216ENST00000552301 FER1L6-AS2Q96M78 137 aa17.53■□□□□ 0.4
PRPF40B-216ENST00000552301 NT5DC2Q9H857 520 aa17.53■□□□□ 0.4
PRPF40B-216ENST00000552301 SEMA3GQ9NS98 782 aa17.53■□□□□ 0.4
PRPF40B-216ENST00000552301 TUBD1Q9UJT1 453 aa17.53■□□□□ 0.4
PRPF40B-216ENST00000552301 G3BP2Q9UN86 482 aaKnown RBP17.53■□□□□ 0.4
PRPF40B-216ENST00000552301 IGLV3-12A0A075B6K2 115 aa17.52■□□□□ 0.4
PRPF40B-216ENST00000552301 GOLGA8RI6L899 631 aa17.52■□□□□ 0.4
PRPF40B-216ENST00000552301 SGK494L7N484 410 aa17.52■□□□□ 0.4
PRPF40B-216ENST00000552301 RDH16O75452 317 aa17.52■□□□□ 0.4
PRPF40B-216ENST00000552301 ZNF888P0CJ79 500 aaPredicted RBP17.52■□□□□ 0.4
PRPF40B-216ENST00000552301 MMP11P24347 488 aa17.52■□□□□ 0.4
PRPF40B-216ENST00000552301 ARL1P40616 181 aaPredicted RBP17.52■□□□□ 0.4
PRPF40B-216ENST00000552301 HNF4AP41235 474 aa17.52■□□□□ 0.4
PRPF40B-216ENST00000552301 MAT1AQ00266 395 aaKnown RBP17.52■□□□□ 0.4
PRPF40B-216ENST00000552301 KLC1Q07866 573 aa17.52■□□□□ 0.4
PRPF40B-216ENST00000552301 IFFO1Q0D2I5 559 aa17.52■□□□□ 0.4
PRPF40B-216ENST00000552301 CHAF1BQ13112 559 aa17.52■□□□□ 0.4
PRPF40B-216ENST00000552301 PCBP2Q15366 365 aaKnown RBP eCLIP17.52■□□□□ 0.4
PRPF40B-216ENST00000552301 TBCCQ15814 346 aa17.52■□□□□ 0.4
PRPF40B-216ENST00000552301 DEFB134Q4QY38 66 aa17.52■□□□□ 0.4
PRPF40B-216ENST00000552301 VWA2Q5GFL6 755 aa17.52■□□□□ 0.4
PRPF40B-216ENST00000552301 TOR1AIP1Q5JTV8 583 aa17.52■□□□□ 0.4
PRPF40B-216ENST00000552301 CPZQ66K79 652 aa17.52■□□□□ 0.4
PRPF40B-216ENST00000552301 MED25Q71SY5 747 aa17.52■□□□□ 0.4
PRPF40B-216ENST00000552301 PRSS41Q7RTY9 318 aa17.52■□□□□ 0.4
PRPF40B-216ENST00000552301 PPP1R32Q7Z5V6 425 aa17.52■□□□□ 0.4
PRPF40B-216ENST00000552301 EXD3Q8N9H8 876 aa17.52■□□□□ 0.4
PRPF40B-216ENST00000552301 C9orf43Q8TAL5 461 aaPredicted RBP17.52■□□□□ 0.4
PRPF40B-216ENST00000552301 AENQ8WTP8 325 aaKnown RBP17.52■□□□□ 0.4
PRPF40B-216ENST00000552301 NACC2Q96BF6 587 aa17.52■□□□□ 0.4
PRPF40B-216ENST00000552301 PHF21BQ96EK2 531 aa17.52■□□□□ 0.4
PRPF40B-216ENST00000552301 WDR34Q96EX3 536 aa17.52■□□□□ 0.4
PRPF40B-216ENST00000552301 ING2Q9H160 280 aa17.52■□□□□ 0.4
PRPF40B-216ENST00000552301 HCN3Q9P1Z3 774 aa17.52■□□□□ 0.4
PRPF40B-216ENST00000552301 C3orf18Q9UK00 162 aa17.52■□□□□ 0.4
PRPF40B-216ENST00000552301 NAALAD2Q9Y3Q0 740 aa17.52■□□□□ 0.4
PRPF40B-216ENST00000552301 SMG1Q96Q15 3661 aaKnown RBP17.52■□□□□ 0.39
PRPF40B-216ENST00000552301 SCN3AQ9NY46 2000 aa17.52■□□□□ 0.39
PRPF40B-216ENST00000552301 IGSF10Q6WRI0 2623 aa17.51■□□□□ 0.39
PRPF40B-216ENST00000552301 ZNF860A6NHJ4 632 aa17.51■□□□□ 0.39
PRPF40B-216ENST00000552301 STX16-NPEPL1H3BU86 382 aa17.51■□□□□ 0.39
PRPF40B-216ENST00000552301 LOC400499M0QZD8 3231 aa17.51■□□□□ 0.39
PRPF40B-216ENST00000552301 STX16O14662 325 aa17.51■□□□□ 0.39
PRPF40B-216ENST00000552301 CDH16O75309 829 aa17.51■□□□□ 0.39
PRPF40B-216ENST00000552301 CLEC3AO75596 197 aa17.51■□□□□ 0.39
PRPF40B-216ENST00000552301 HEXBP07686 556 aa17.51■□□□□ 0.39
PRPF40B-216ENST00000552301 PYGBP11216 843 aa17.51■□□□□ 0.39
PRPF40B-216ENST00000552301 TAC1P20366 129 aa17.51■□□□□ 0.39
PRPF40B-216ENST00000552301 EEF1DP29692 281 aaKnown RBP17.51■□□□□ 0.39
PRPF40B-216ENST00000552301 ATRXP46100 2492 aa17.51■□□□□ 0.39
PRPF40B-216ENST00000552301 GTF2H2Q13888 395 aa17.51■□□□□ 0.39
PRPF40B-216ENST00000552301 SYT16Q17RD7 645 aa17.51■□□□□ 0.39
PRPF40B-216ENST00000552301 MFSD4BQ5TF39 518 aa17.51■□□□□ 0.39
PRPF40B-216ENST00000552301 GTF2H2CQ6P1K8 395 aa17.51■□□□□ 0.39
PRPF40B-216ENST00000552301 METTL2BQ6P1Q9 378 aaKnown RBP17.51■□□□□ 0.39
PRPF40B-216ENST00000552301 TDRPQ86YL5 185 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms