RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 H0YGG7 62 aa5.04□□□□□ -1.6
HOXB3-213ENST00000552000 I3L1I5 382 aaPredicted RBP5.04□□□□□ -1.6
HOXB3-213ENST00000552000 PRPF4O43172 522 aaKnown RBP eCLIP5.04□□□□□ -1.6
HOXB3-213ENST00000552000 FOXS1O43638 330 aa5.04□□□□□ -1.6
HOXB3-213ENST00000552000 HS6ST1O60243 411 aa5.04□□□□□ -1.6
HOXB3-213ENST00000552000 NME2P1O60361 137 aa5.04□□□□□ -1.6
HOXB3-213ENST00000552000 PDE9AO76083 593 aa5.04□□□□□ -1.6
HOXB3-213ENST00000552000 CRTAMO95727 393 aa5.04□□□□□ -1.6
HOXB3-213ENST00000552000 FTH1P02794 183 aa5.04□□□□□ -1.6
HOXB3-213ENST00000552000 RAF1P04049 648 aa5.04□□□□□ -1.6
HOXB3-213ENST00000552000 KRT1P04264 644 aa5.04□□□□□ -1.6
HOXB3-213ENST00000552000 RNASE1P07998 156 aaKnown RBP5.04□□□□□ -1.6
HOXB3-213ENST00000552000 PECAM1P16284 738 aaPredicted RBP5.04□□□□□ -1.6
HOXB3-213ENST00000552000 TFEBP19484 476 aa5.04□□□□□ -1.6
HOXB3-213ENST00000552000 NME2P22392 152 aa5.04□□□□□ -1.6
HOXB3-213ENST00000552000 HOXC12P31275 282 aa5.04□□□□□ -1.6
HOXB3-213ENST00000552000 SLC26A3P40879 764 aa5.04□□□□□ -1.6
HOXB3-213ENST00000552000 ARHGAP25P42331 645 aa5.04□□□□□ -1.6
HOXB3-213ENST00000552000 EIF1AXP47813 144 aaKnown RBP5.04□□□□□ -1.6
HOXB3-213ENST00000552000 NR0B1P51843 470 aaKnown RBP5.04□□□□□ -1.6
HOXB3-213ENST00000552000 GEMP55040 296 aa5.04□□□□□ -1.6
HOXB3-213ENST00000552000 ARF3P61204 181 aaPredicted RBP5.04□□□□□ -1.6
HOXB3-213ENST00000552000 YBX1P67809 324 aaKnown RBP5.04□□□□□ -1.6
HOXB3-213ENST00000552000 PLOD1Q02809 727 aaPredicted RBP5.04□□□□□ -1.6
HOXB3-213ENST00000552000 KEAP1Q14145 624 aa5.04□□□□□ -1.6
HOXB3-213ENST00000552000 GRB7Q14451 532 aa5.04□□□□□ -1.6
HOXB3-213ENST00000552000 HKDC1Q2TB90 917 aa5.04□□□□□ -1.6
HOXB3-213ENST00000552000 GPR33Q49SQ1 333 aa5.04□□□□□ -1.6
HOXB3-213ENST00000552000 MINDY4Q4G0A6 757 aa5.04□□□□□ -1.6
HOXB3-213ENST00000552000 CMPK2Q5EBM0 449 aa5.04□□□□□ -1.6
HOXB3-213ENST00000552000 FIGNQ5HY92 759 aa5.04□□□□□ -1.6
HOXB3-213ENST00000552000 HP1BP3Q5SSJ5 553 aaPredicted RBP5.04□□□□□ -1.6
HOXB3-213ENST00000552000 MFSD4BQ5TF39 518 aa5.04□□□□□ -1.6
HOXB3-213ENST00000552000 ALKBH2Q6NS38 261 aa5.04□□□□□ -1.6
HOXB3-213ENST00000552000 RNF44Q7L0R7 432 aa5.04□□□□□ -1.6
HOXB3-213ENST00000552000 MED12LQ86YW9 2145 aa5.04□□□□□ -1.6
HOXB3-213ENST00000552000 VRK3Q8IV63 474 aa5.04□□□□□ -1.6
HOXB3-213ENST00000552000 DCUN1D3Q8IWE4 304 aa5.04□□□□□ -1.6
HOXB3-213ENST00000552000 LRRC56Q8IYG6 542 aaPredicted RBP5.04□□□□□ -1.6
HOXB3-213ENST00000552000 CSNK1A1LQ8N752 337 aa5.04□□□□□ -1.6
HOXB3-213ENST00000552000 HORMAD2Q8N7B1 307 aa5.04□□□□□ -1.6
HOXB3-213ENST00000552000 MYRIPQ8NFW9 859 aa5.04□□□□□ -1.6
HOXB3-213ENST00000552000 TFB1MQ8WVM0 346 aaKnown RBP5.04□□□□□ -1.6
HOXB3-213ENST00000552000 DNAJC1Q96KC8 554 aaKnown RBP5.04□□□□□ -1.6
HOXB3-213ENST00000552000 CYTH2Q99418 400 aa5.04□□□□□ -1.6
HOXB3-213ENST00000552000 OLFM1Q99784 485 aa5.04□□□□□ -1.6
HOXB3-213ENST00000552000 MENTQ9BUN1 341 aa5.04□□□□□ -1.6
HOXB3-213ENST00000552000 CDCP1Q9H5V8 836 aa5.04□□□□□ -1.6
HOXB3-213ENST00000552000 DMRT3Q9NQL9 472 aa5.04□□□□□ -1.6
HOXB3-213ENST00000552000 C19orf25Q9UFG5 118 aaPredicted RBP5.04□□□□□ -1.6
HOXB3-213ENST00000552000 RSPH14Q9UHP6 348 aa5.04□□□□□ -1.6
HOXB3-213ENST00000552000 RUVBL1Q9Y265 456 aaKnown RBP5.04□□□□□ -1.6
HOXB3-213ENST00000552000 ACTL7BQ9Y614 415 aa5.04□□□□□ -1.6
HOXB3-213ENST00000552000 ALG6Q9Y672 507 aa5.04□□□□□ -1.6
HOXB3-213ENST00000552000 A0A087X0T9 212 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.03□□□□□ -1.6
HOXB3-213ENST00000552000 A0A0U1RQJ8 604 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 OR2A25A4D2G3 310 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 KRT87PA6NCN2 255 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 A6NNC1 897 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 RNF212BA8MTL3 300 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 ZNF487B1APH4 448 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 NPIPA2E9PIF3 369 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 NPIPA3F8WFD2 350 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 H7C1Q1 480 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 NDC80O14777 642 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 SMAD7O15105 426 aaKnown RBP5.03□□□□□ -1.6
HOXB3-213ENST00000552000 ANXA9O76027 345 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 FKBP9O95302 570 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 STATHP02808 62 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 FAM228BP0C875 321 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 CD8BP10966 210 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 TNNT1P13805 278 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 CFPP27918 469 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 ADRA1AP35348 466 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 BUD31P41223 144 aaPredicted RBP5.03□□□□□ -1.6
HOXB3-213ENST00000552000 BDKRB1P46663 353 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 ZFP36L2P47974 494 aaKnown RBP5.03□□□□□ -1.6
HOXB3-213ENST00000552000 NR2C2P49116 596 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 TAS2R50P59544 299 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 DCAF7P61962 342 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 PPP2R2BQ00005 443 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 MYL5Q02045 173 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 ACTN3Q08043 901 aaPredicted RBP5.03□□□□□ -1.6
HOXB3-213ENST00000552000 HSPA14Q0VDF9 509 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 MSLNQ13421 630 aaPredicted RBP5.03□□□□□ -1.6
HOXB3-213ENST00000552000 SPARCL1Q14515 664 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 MESDQ14696 234 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 PCBP2Q15366 365 aaKnown RBP eCLIP5.03□□□□□ -1.6
HOXB3-213ENST00000552000 MLANAQ16655 118 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 SFT2D3Q587I9 215 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 ODF2Q5BJF6 829 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 FBXW10Q5XX13 1052 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 KAZNQ674X7 775 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 FBXO42Q6P3S6 717 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 ARHGAP11AQ6P4F7 1023 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 ALKBH5Q6P6C2 394 aaKnown RBP5.03□□□□□ -1.6
HOXB3-213ENST00000552000 LRRC8BQ6P9F7 803 aa5.03□□□□□ -1.6
HOXB3-213ENST00000552000 PAPD4Q6PIY7 484 aaKnown RBP5.03□□□□□ -1.6
HOXB3-213ENST00000552000 MFSD7Q6UXD7 560 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms