RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 A0A1B0GUH1 482 aa16.38■□□□□ 0.21
CHMP1A-205ENST00000548650 TRBC2A0A5B9 178 aa16.38■□□□□ 0.21
CHMP1A-205ENST00000548650 ZSCAN12O43309 604 aa16.38■□□□□ 0.21
CHMP1A-205ENST00000548650 GALR3O60755 368 aaPredicted RBP16.38■□□□□ 0.21
CHMP1A-205ENST00000548650 CDC123O75794 336 aaPredicted RBP16.38■□□□□ 0.21
CHMP1A-205ENST00000548650 RASAL1O95294 804 aa16.38■□□□□ 0.21
CHMP1A-205ENST00000548650 ENO2P09104 434 aaPredicted RBP16.38■□□□□ 0.21
CHMP1A-205ENST00000548650 ZNF37AP17032 561 aaPredicted RBP16.38■□□□□ 0.21
CHMP1A-205ENST00000548650 TCP1P17987 556 aaKnown RBP16.38■□□□□ 0.21
CHMP1A-205ENST00000548650 PMP22Q01453 160 aa16.38■□□□□ 0.21
CHMP1A-205ENST00000548650 ABRAXAS2Q15018 415 aa16.38■□□□□ 0.21
CHMP1A-205ENST00000548650 HERC3Q15034 1050 aa16.38■□□□□ 0.21
CHMP1A-205ENST00000548650 EXT1Q16394 746 aa16.38■□□□□ 0.21
CHMP1A-205ENST00000548650 PPP1R3AQ16821 1122 aa16.38■□□□□ 0.21
CHMP1A-205ENST00000548650 SFT2D3Q587I9 215 aa16.38■□□□□ 0.21
CHMP1A-205ENST00000548650 ACER2Q5QJU3 275 aa16.38■□□□□ 0.21
CHMP1A-205ENST00000548650 CATSPEREQ5SY80 951 aa16.38■□□□□ 0.21
CHMP1A-205ENST00000548650 PAPD4Q6PIY7 484 aaKnown RBP16.38■□□□□ 0.21
CHMP1A-205ENST00000548650 GFRALQ6UXV0 394 aa16.38■□□□□ 0.21
CHMP1A-205ENST00000548650 STRA8Q7Z7C7 330 aa16.38■□□□□ 0.21
CHMP1A-205ENST00000548650 CRLF3Q8IUI8 442 aa16.38■□□□□ 0.21
CHMP1A-205ENST00000548650 PDIK1LQ8N165 341 aa16.38■□□□□ 0.21
CHMP1A-205ENST00000548650 NEIL2Q969S2 332 aa16.38■□□□□ 0.21
CHMP1A-205ENST00000548650 RELTQ969Z4 430 aa16.38■□□□□ 0.21
CHMP1A-205ENST00000548650 PPANQ9NQ55 473 aaKnown RBP16.38■□□□□ 0.21
CHMP1A-205ENST00000548650 STMN3Q9NZ72 180 aa16.38■□□□□ 0.21
CHMP1A-205ENST00000548650 TEX264Q9Y6I9 313 aa16.38■□□□□ 0.21
CHMP1A-205ENST00000548650 LRBAP50851 2863 aa16.38■□□□□ 0.21
CHMP1A-205ENST00000548650 PABPN1LA6NDY0 278 aaKnown RBP16.37■□□□□ 0.21
CHMP1A-205ENST00000548650 A8MUI8 341 aa16.37■□□□□ 0.21
CHMP1A-205ENST00000548650 MAGEB17A8MXT2 336 aa16.37■□□□□ 0.21
CHMP1A-205ENST00000548650 OR1F1O43749 312 aa16.37■□□□□ 0.21
CHMP1A-205ENST00000548650 MAN1A2O60476 641 aa16.37■□□□□ 0.21
CHMP1A-205ENST00000548650 UNC5CO95185 931 aa16.37■□□□□ 0.21
CHMP1A-205ENST00000548650 GUCA1CO95843 209 aa16.37■□□□□ 0.21
CHMP1A-205ENST00000548650 B3GALT4O96024 378 aa16.37■□□□□ 0.21
CHMP1A-205ENST00000548650 CRYABP02511 175 aaKnown RBP16.37■□□□□ 0.21
CHMP1A-205ENST00000548650 IL10P22301 178 aa16.37■□□□□ 0.21
CHMP1A-205ENST00000548650 REEP5Q00765 189 aa16.37■□□□□ 0.21
CHMP1A-205ENST00000548650 SRSF11Q05519 484 aaKnown RBP16.37■□□□□ 0.21
CHMP1A-205ENST00000548650 PWP1Q13610 501 aa16.37■□□□□ 0.21
CHMP1A-205ENST00000548650 DEFB134Q4QY38 66 aa16.37■□□□□ 0.21
CHMP1A-205ENST00000548650 TMEM207Q6UWW9 146 aa16.37■□□□□ 0.21
CHMP1A-205ENST00000548650 TICAM1Q8IUC6 712 aa16.37■□□□□ 0.21
CHMP1A-205ENST00000548650 MDS2Q8NDY4 140 aa16.37■□□□□ 0.21
CHMP1A-205ENST00000548650 SUN3Q8TAQ9 357 aa16.37■□□□□ 0.21
CHMP1A-205ENST00000548650 M1APQ8TC57 530 aa16.37■□□□□ 0.21
CHMP1A-205ENST00000548650 NT5CQ8TCD5 201 aa16.37■□□□□ 0.21
CHMP1A-205ENST00000548650 SLC5A11Q8WWX8 675 aa16.37■□□□□ 0.21
CHMP1A-205ENST00000548650 ATL1Q8WXF7 558 aa16.37■□□□□ 0.21
CHMP1A-205ENST00000548650 TRIM51Q9BSJ1 452 aa16.37■□□□□ 0.21
CHMP1A-205ENST00000548650 KCNK13Q9HB14 408 aa16.37■□□□□ 0.21
CHMP1A-205ENST00000548650 MMP25Q9NPA2 562 aa16.37■□□□□ 0.21
CHMP1A-205ENST00000548650 TRMT1Q9NXH9 659 aaKnown RBP16.37■□□□□ 0.21
CHMP1A-205ENST00000548650 VWA7Q9Y334 891 aa16.37■□□□□ 0.21
CHMP1A-205ENST00000548650 PSAT1Q9Y617 370 aa16.37■□□□□ 0.21
CHMP1A-205ENST00000548650 CTAGE15A4D2H0 777 aa16.36■□□□□ 0.21
CHMP1A-205ENST00000548650 TP73O15350 636 aa16.36■□□□□ 0.21
CHMP1A-205ENST00000548650 DNAJB6O75190 326 aa16.36■□□□□ 0.21
CHMP1A-205ENST00000548650 FHP07954 510 aa16.36■□□□□ 0.21
CHMP1A-205ENST00000548650 ALOX12P18054 663 aa16.36■□□□□ 0.21
CHMP1A-205ENST00000548650 SCTRP47872 440 aa16.36■□□□□ 0.21
CHMP1A-205ENST00000548650 OLR1P78380 273 aa16.36■□□□□ 0.21
CHMP1A-205ENST00000548650 TUBA3CQ13748 450 aa16.36■□□□□ 0.21
CHMP1A-205ENST00000548650 FRG1Q14331 258 aaKnown RBP16.36■□□□□ 0.21
CHMP1A-205ENST00000548650 USP10Q14694 798 aaKnown RBP16.36■□□□□ 0.21
CHMP1A-205ENST00000548650 NSDHLQ15738 373 aa16.36■□□□□ 0.21
CHMP1A-205ENST00000548650 ZNF766Q5HY98 468 aa16.36■□□□□ 0.21
CHMP1A-205ENST00000548650 TUBA3EQ6PEY2 450 aa16.36■□□□□ 0.21
CHMP1A-205ENST00000548650 SYDE1Q6ZW31 735 aaPredicted RBP16.36■□□□□ 0.21
CHMP1A-205ENST00000548650 CTAGE6Q86UF2 777 aa16.36■□□□□ 0.21
CHMP1A-205ENST00000548650 KLHL7Q8IXQ5 586 aa16.36■□□□□ 0.21
CHMP1A-205ENST00000548650 PLPP5Q8NEB5 264 aa16.36■□□□□ 0.21
CHMP1A-205ENST00000548650 DNAJB8Q8NHS0 232 aa16.36■□□□□ 0.21
CHMP1A-205ENST00000548650 TBC1D20Q96BZ9 403 aa16.36■□□□□ 0.21
CHMP1A-205ENST00000548650 LRRC39Q96DD0 335 aa16.36■□□□□ 0.21
CHMP1A-205ENST00000548650 PDLIM5Q96HC4 596 aaKnown RBP16.36■□□□□ 0.21
CHMP1A-205ENST00000548650 ZNF354BQ96LW1 612 aa16.36■□□□□ 0.21
CHMP1A-205ENST00000548650 TSNARE1Q96NA8 513 aa16.36■□□□□ 0.21
CHMP1A-205ENST00000548650 LPAR4Q99677 370 aa16.36■□□□□ 0.21
CHMP1A-205ENST00000548650 TRIM54Q9BYV2 358 aa16.36■□□□□ 0.21
CHMP1A-205ENST00000548650 ZFP69BQ9UJL9 534 aa16.36■□□□□ 0.21
CHMP1A-205ENST00000548650 NCOA6Q14686 2063 aaPredicted RBP16.36■□□□□ 0.21
CHMP1A-205ENST00000548650 NPEPPSL1A6NEC2 478 aa16.35■□□□□ 0.21
CHMP1A-205ENST00000548650 SEC31AO94979 1220 aaKnown RBP16.35■□□□□ 0.21
CHMP1A-205ENST00000548650 ZNF888P0CJ79 500 aaPredicted RBP16.35■□□□□ 0.21
CHMP1A-205ENST00000548650 AHRP35869 848 aa16.35■□□□□ 0.21
CHMP1A-205ENST00000548650 SLC26A5P58743 744 aa16.35■□□□□ 0.21
CHMP1A-205ENST00000548650 DR1Q01658 176 aa16.35■□□□□ 0.21
CHMP1A-205ENST00000548650 RGS1Q08116 209 aa16.35■□□□□ 0.21
CHMP1A-205ENST00000548650 ZNF460Q14592 562 aa16.35■□□□□ 0.21
CHMP1A-205ENST00000548650 ZC3HC1Q86WB0 502 aaKnown RBP16.35■□□□□ 0.21
CHMP1A-205ENST00000548650 ANKRD53Q8N9V6 530 aa16.35■□□□□ 0.21
CHMP1A-205ENST00000548650 CAPZA3Q96KX2 299 aa16.35■□□□□ 0.21
CHMP1A-205ENST00000548650 SIGLEC12Q96PQ1 595 aa16.35■□□□□ 0.21
CHMP1A-205ENST00000548650 HES7Q9BYE0 225 aa16.35■□□□□ 0.21
CHMP1A-205ENST00000548650 PELI2Q9HAT8 420 aa16.35■□□□□ 0.21
CHMP1A-205ENST00000548650 ANKRD10Q9NXR5 420 aa16.35■□□□□ 0.21
CHMP1A-205ENST00000548650 SEC14L3Q9UDX4 400 aa16.35■□□□□ 0.21
CHMP1A-205ENST00000548650 ENTPD4Q9Y227 616 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms