RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 GPN1Q9HCN4 374 aaPredicted RBP3.69□□□□□ -1.82
SNHG1-224ENST00000545688 PDE7BQ9NP56 450 aa3.69□□□□□ -1.82
SNHG1-224ENST00000545688 MRPL15Q9P015 296 aaKnown RBP3.69□□□□□ -1.82
SNHG1-224ENST00000545688 PCDHGB4Q9UN71 923 aa3.69□□□□□ -1.82
SNHG1-224ENST00000545688 PA2G4Q9UQ80 394 aaKnown RBP3.69□□□□□ -1.82
SNHG1-224ENST00000545688 RPS6KL1Q9Y6S9 549 aa3.69□□□□□ -1.82
SNHG1-224ENST00000545688 SHANK3Q9BYB0 1731 aa3.69□□□□□ -1.82
SNHG1-224ENST00000545688 BCL9O00512 1426 aa3.69□□□□□ -1.82
SNHG1-224ENST00000545688 NRKQ7Z2Y5 1582 aa3.68□□□□□ -1.82
SNHG1-224ENST00000545688 NUP155O75694 1391 aa3.68□□□□□ -1.82
SNHG1-224ENST00000545688 TRBV4-1A0A0J9YWV2 114 aa3.68□□□□□ -1.82
SNHG1-224ENST00000545688 A0A1W2PPM1 405 aa3.68□□□□□ -1.82
SNHG1-224ENST00000545688 KLLNB2CW77 178 aa3.68□□□□□ -1.82
SNHG1-224ENST00000545688 K7EQD1 137 aa3.68□□□□□ -1.82
SNHG1-224ENST00000545688 PHOX2AO14813 284 aa3.68□□□□□ -1.82
SNHG1-224ENST00000545688 MELTFP08582 738 aa3.68□□□□□ -1.82
SNHG1-224ENST00000545688 GP9P14770 177 aa3.68□□□□□ -1.82
SNHG1-224ENST00000545688 PORP16435 677 aaPredicted RBP3.68□□□□□ -1.82
SNHG1-224ENST00000545688 ALOX12P18054 663 aa3.68□□□□□ -1.82
SNHG1-224ENST00000545688 PAX3P23760 479 aa3.68□□□□□ -1.82
SNHG1-224ENST00000545688 ELAVL4P26378 380 aaKnown RBP3.68□□□□□ -1.82
SNHG1-224ENST00000545688 ZFP36L2P47974 494 aaKnown RBP3.68□□□□□ -1.82
SNHG1-224ENST00000545688 TRAP1Q12931 704 aaKnown RBP3.68□□□□□ -1.82
SNHG1-224ENST00000545688 CUL3Q13618 768 aa3.68□□□□□ -1.82
SNHG1-224ENST00000545688 CUL4AQ13619 759 aa3.68□□□□□ -1.82
SNHG1-224ENST00000545688 MEA1Q16626 185 aa3.68□□□□□ -1.82
SNHG1-224ENST00000545688 CDHR3Q6ZTQ4 885 aa3.68□□□□□ -1.82
SNHG1-224ENST00000545688 IL17RELQ6ZVW7 336 aa3.68□□□□□ -1.82
SNHG1-224ENST00000545688 ATL1Q8WXF7 558 aa3.68□□□□□ -1.82
SNHG1-224ENST00000545688 PIK3R3Q92569 461 aa3.68□□□□□ -1.82
SNHG1-224ENST00000545688 EVI5LQ96CN4 794 aa3.68□□□□□ -1.82
SNHG1-224ENST00000545688 ZNF597Q96LX8 424 aa3.68□□□□□ -1.82
SNHG1-224ENST00000545688 HAO2Q9NYQ3 351 aa3.68□□□□□ -1.82
SNHG1-224ENST00000545688 SLC24A2Q9UI40 661 aa3.68□□□□□ -1.82
SNHG1-224ENST00000545688 LNPEPQ9UIQ6 1025 aa3.68□□□□□ -1.82
SNHG1-224ENST00000545688 CHD4Q14839 1912 aa3.68□□□□□ -1.82
SNHG1-224ENST00000545688 ABCA3Q99758 1704 aa3.67□□□□□ -1.82
SNHG1-224ENST00000545688 ADCY9O60503 1353 aa3.67□□□□□ -1.82
SNHG1-224ENST00000545688 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.67□□□□□ -1.82
SNHG1-224ENST00000545688 TRIM77I1YAP6 450 aa3.67□□□□□ -1.82
SNHG1-224ENST00000545688 LRCH4O75427 683 aa3.67□□□□□ -1.82
SNHG1-224ENST00000545688 DUX4L4P0CJ87 422 aa3.67□□□□□ -1.82
SNHG1-224ENST00000545688 LHX1P48742 406 aa3.67□□□□□ -1.82
SNHG1-224ENST00000545688 GEMIN4P57678 1058 aaKnown RBP3.67□□□□□ -1.82
SNHG1-224ENST00000545688 UBXN2AP68543 259 aa3.67□□□□□ -1.82
SNHG1-224ENST00000545688 DHODHQ02127 395 aa3.67□□□□□ -1.82
SNHG1-224ENST00000545688 SGCGQ13326 291 aa3.67□□□□□ -1.82
SNHG1-224ENST00000545688 ZNF177Q13360 481 aaPredicted RBP3.67□□□□□ -1.82
SNHG1-224ENST00000545688 TRA2AQ13595 282 aaKnown RBP eCLIP3.67□□□□□ -1.822e-56■■■■□ 20.9
SNHG1-224ENST00000545688 MS4A18Q3C1V0 323 aa3.67□□□□□ -1.82
SNHG1-224ENST00000545688 RNF212Q495C1 297 aa3.67□□□□□ -1.82
SNHG1-224ENST00000545688 ITPRIPL1Q6GPH6 555 aa3.67□□□□□ -1.82
SNHG1-224ENST00000545688 FCRLAQ7L513 359 aa3.67□□□□□ -1.82
SNHG1-224ENST00000545688 ADGRA1Q86SQ6 560 aa3.67□□□□□ -1.82
SNHG1-224ENST00000545688 DNAAF5Q86Y56 855 aa3.67□□□□□ -1.82
SNHG1-224ENST00000545688 FAM89BQ8N5H3 189 aa3.67□□□□□ -1.82
SNHG1-224ENST00000545688 TDRD5Q8NAT2 981 aaKnown RBP3.67□□□□□ -1.82
SNHG1-224ENST00000545688 TSPAN14Q8NG11 270 aa3.67□□□□□ -1.82
SNHG1-224ENST00000545688 MOB3AQ96BX8 217 aa3.67□□□□□ -1.82
SNHG1-224ENST00000545688 C1orf147Q96MC9 270 aaPredicted RBP3.67□□□□□ -1.82
SNHG1-224ENST00000545688 CHCHD5Q9BSY4 110 aa3.67□□□□□ -1.82
SNHG1-224ENST00000545688 KRTAP4-3Q9BYR4 195 aa3.67□□□□□ -1.82
SNHG1-224ENST00000545688 PRRG4Q9BZD6 226 aa3.67□□□□□ -1.82
SNHG1-224ENST00000545688 ANKZF1Q9H8Y5 726 aa3.67□□□□□ -1.82
SNHG1-224ENST00000545688 DDX25Q9UHL0 483 aaKnown RBP3.67□□□□□ -1.82
SNHG1-224ENST00000545688 SELENOKQ9Y6D0 94 aa3.67□□□□□ -1.82
SNHG1-224ENST00000545688 STYXL1Q9Y6J8 313 aa3.67□□□□□ -1.82
SNHG1-224ENST00000545688 MYOM1P52179 1685 aa3.67□□□□□ -1.82
SNHG1-224ENST00000545688 KIF1AQ12756 1690 aa3.67□□□□□ -1.82
SNHG1-224ENST00000545688 FMN2Q9NZ56 1722 aa3.67□□□□□ -1.82
SNHG1-224ENST00000545688 RGPD3A6NKT7 1758 aaPredicted RBP3.66□□□□□ -1.82
SNHG1-224ENST00000545688 COL14A1Q05707 1796 aaKnown RBP3.66□□□□□ -1.82
SNHG1-224ENST00000545688 RGPD4Q7Z3J3 1758 aa3.66□□□□□ -1.82
SNHG1-224ENST00000545688 FER1L5A0AVI2 2057 aa3.66□□□□□ -1.82
SNHG1-224ENST00000545688 DLC1Q96QB1 1528 aa3.66□□□□□ -1.82
SNHG1-224ENST00000545688 A0A1W2PPK0 400 aa3.66□□□□□ -1.82
SNHG1-224ENST00000545688 CASTOR2A6NHX0 329 aa3.66□□□□□ -1.82
SNHG1-224ENST00000545688 C2CD4DB7Z1M9 353 aa3.66□□□□□ -1.82
SNHG1-224ENST00000545688 CCL24O00175 119 aa3.66□□□□□ -1.82
SNHG1-224ENST00000545688 PRELPP51888 382 aa3.66□□□□□ -1.82
SNHG1-224ENST00000545688 STK4Q13043 487 aa3.66□□□□□ -1.82
SNHG1-224ENST00000545688 SLC15A2Q16348 729 aa3.66□□□□□ -1.82
SNHG1-224ENST00000545688 EIPR1Q53HC9 387 aa3.66□□□□□ -1.82
SNHG1-224ENST00000545688 C6orf163Q5TEZ5 329 aa3.66□□□□□ -1.82
SNHG1-224ENST00000545688 TIPARPQ7Z3E1 657 aaKnown RBP3.66□□□□□ -1.82
SNHG1-224ENST00000545688 ABHD1Q96SE0 405 aa3.66□□□□□ -1.82
SNHG1-224ENST00000545688 TBC1D22BQ9NU19 505 aa3.66□□□□□ -1.82
SNHG1-224ENST00000545688 OLAHQ9NV23 265 aa3.66□□□□□ -1.82
SNHG1-224ENST00000545688 CPSF3Q9UKF6 684 aaKnown RBP3.66□□□□□ -1.82
SNHG1-224ENST00000545688 PRDM4Q9UKN5 801 aa3.66□□□□□ -1.82
SNHG1-224ENST00000545688 PPIEQ9UNP9 301 aaKnown RBP3.66□□□□□ -1.82
SNHG1-224ENST00000545688 ANKARQ7Z5J8 1434 aa3.66□□□□□ -1.82
SNHG1-224ENST00000545688 PEAK1Q9H792 1746 aa3.66□□□□□ -1.82
SNHG1-224ENST00000545688 TRPM3Q9HCF6 1732 aaPredicted RBP3.66□□□□□ -1.82
SNHG1-224ENST00000545688 CRYBG1Q9Y4K1 1723 aa3.66□□□□□ -1.82
SNHG1-224ENST00000545688 NOTCH2Q04721 2471 aa3.66□□□□□ -1.82
SNHG1-224ENST00000545688 IGSF1Q8N6C5 1336 aa3.66□□□□□ -1.82
SNHG1-224ENST00000545688 CLTCL1P53675 1640 aa3.66□□□□□ -1.82
SNHG1-224ENST00000545688 ALS2Q96Q42 1657 aa3.65□□□□□ -1.82
SNHG1-224ENST00000545688 DHX57Q6P158 1386 aaKnown RBP3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms