RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 RGCCQ9H4X1 137 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 PDZD7Q9H5P4 517 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 KIR3DX1Q9H7L2 352 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 BCO1Q9HAY6 547 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 ERVK-5Q9HDB9 667 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 SPAG4Q9NPE6 437 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 ZNF302Q9NR11 478 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 SNX15Q9NRS6 342 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 SEC14L4Q9UDX3 406 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 RAPGEFL1Q9UHV5 662 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 CDC14AQ9UNH5 594 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 ADAM18Q9Y3Q7 739 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 MMACHCQ9Y4U1 282 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 PCDHB11Q9Y5F2 797 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 USP3Q9Y6I4 520 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 A3GALT2U3KPV4 340 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 CNTNAP1P78357 1384 aa4.99□□□□□ -1.61
UBE4A-203ENST00000545354 FAM205AQ6ZU69 1335 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 RPTORQ8N122 1335 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 BHLHE40O14503 412 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 ADAM10O14672 748 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 PJA2O43164 708 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 UGT2B11O75310 529 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 CNTN5O94779 1100 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 C9P02748 559 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 RPLP2P05387 115 aaKnown RBP4.98□□□□□ -1.61
UBE4A-203ENST00000545354 UQCRFS1P1P0C7P4 283 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 TRIM49P0CI25 452 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 TRIM49CP0CI26 452 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 MAGP20916 626 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 ACADLP28330 430 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 GTF2E2P29084 291 aaKnown RBP4.98□□□□□ -1.61
UBE4A-203ENST00000545354 PRDX5P30044 214 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 CD96P40200 585 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 LHX1P48742 406 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 E2F1Q01094 437 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 SEMG2Q02383 582 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 SP3Q02447 781 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 SCN1BQ07699 218 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 ARHGEF7Q14155 803 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 GUCA2BQ16661 112 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 KLHL22Q53GT1 634 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 SFT2D3Q587I9 215 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 EFHC2Q5JST6 749 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 C9orf64Q5T6V5 341 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 GPRC6AQ5T6X5 926 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 LIPIQ6XZB0 460 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 LHFPL2Q6ZUX7 228 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 LYSMD3Q7Z3D4 306 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 CLNKQ7Z7G1 428 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 LDHDQ86WU2 507 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 TGIF2LXQ8IUE1 241 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 DNAJC22Q8N4W6 341 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 PQLC3Q8N755 202 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 OR51A7Q8NH64 312 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 ACOT11Q8WXI4 607 aaPredicted RBP4.98□□□□□ -1.61
UBE4A-203ENST00000545354 LARP4BQ92615 738 aaKnown RBP4.98□□□□□ -1.61
UBE4A-203ENST00000545354 PSMG2Q969U7 264 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 CCDC124Q96CT7 223 aaKnown RBP4.98□□□□□ -1.61
UBE4A-203ENST00000545354 C12orf66Q96MD2 445 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 ZNF599Q96NL3 588 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 TAAR6Q96RI8 345 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 SIGLEC11Q96RL6 698 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 NODALQ96S42 347 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 LGMNQ99538 433 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 SMOQ99835 787 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 P2RY13Q9BPV8 354 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 WDR77Q9BQA1 342 aaPredicted RBP4.98□□□□□ -1.61
UBE4A-203ENST00000545354 GGACTQ9BVM4 153 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 ING2Q9H160 280 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 SDCBP2Q9H190 292 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 RNPEPQ9H4A4 650 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 AAASQ9NRG9 546 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 ZCCHC3Q9NUD5 404 aaKnown RBP4.98□□□□□ -1.61
UBE4A-203ENST00000545354 TMEM140Q9NV12 185 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 ZNF701Q9NV72 531 aaPredicted RBP4.98□□□□□ -1.61
UBE4A-203ENST00000545354 LYARQ9NX58 379 aaKnown RBP4.98□□□□□ -1.61
UBE4A-203ENST00000545354 KLQ9UEF7 1012 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 PISDQ9UG56 409 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 SERGEFQ9UGK8 458 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 UBQLN2Q9UHD9 624 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 GPR160Q9UJ42 338 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 ZNF225Q9UK10 706 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 TMPRSS11EQ9UL52 423 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 TBX20Q9UMR3 447 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 CCL27Q9Y4X3 112 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 POMT1Q9Y6A1 747 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 SHPRHQ149N8 1683 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 MYH11P35749 1972 aa4.98□□□□□ -1.61
UBE4A-203ENST00000545354 TBC1D3KA0A087X1G2 549 aa4.97□□□□□ -1.61
UBE4A-203ENST00000545354 A0A1B0GV72 72 aa4.97□□□□□ -1.61
UBE4A-203ENST00000545354 FAM234BA2RU67 622 aa4.97□□□□□ -1.61
UBE4A-203ENST00000545354 A4D1N5 150 aa4.97□□□□□ -1.61
UBE4A-203ENST00000545354 BLACEA4D250 179 aa4.97□□□□□ -1.61
UBE4A-203ENST00000545354 ARHGEF33A8MVX0 844 aa4.97□□□□□ -1.61
UBE4A-203ENST00000545354 QSOX1O00391 747 aa4.97□□□□□ -1.61
UBE4A-203ENST00000545354 SMAD7O15105 426 aaKnown RBP4.97□□□□□ -1.61
UBE4A-203ENST00000545354 SCAMP2O15127 329 aaKnown RBP4.97□□□□□ -1.61
UBE4A-203ENST00000545354 NKRFO15226 690 aaKnown RBP eCLIP4.97□□□□□ -1.61
UBE4A-203ENST00000545354 CAPN5O15484 640 aaPredicted RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms