RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 ZNF385DQ9H6B1 395 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 CLMPQ9H6B4 373 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 C11orf49Q9H6J7 331 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 C3orf14Q9HBI5 128 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 IL26Q9NPH9 171 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 TOR4AQ9NXH8 423 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 PCDHB14Q9Y5E9 798 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 RALGAPA2Q2PPJ7 1873 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 A0A1W2PPW3 197 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 AXIN1O15169 862 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 ORC5O43913 435 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 ERAL1O75616 437 aaKnown RBP5.59□□□□□ -1.51
VPS50-220ENST00000544910 EPHX1P07099 455 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 RETP07949 1114 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 SRCP12931 536 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 POU2F1P14859 743 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 PPP1R8Q12972 351 aaKnown RBP5.59□□□□□ -1.51
VPS50-220ENST00000544910 KCNAB2Q13303 367 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 ZNF805Q5CZA5 627 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 C6orf141Q5SZD1 244 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 DPY19L3Q6ZPD9 716 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 BTN2A1Q7KYR7 527 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 NRSN1Q8IZ57 195 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 OR9A1PQ8NGU1 263 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 SMG7Q92540 1137 aaKnown RBP5.59□□□□□ -1.51
VPS50-220ENST00000544910 INPP5KQ9BT40 448 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 MED28Q9H204 178 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 REEP4Q9H6H4 257 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 PRDM8Q9NQV8 689 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 PHPT1Q9NRX4 125 aaPredicted RBP5.59□□□□□ -1.51
VPS50-220ENST00000544910 GPRC5BQ9NZH0 403 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 ZNF232Q9UNY5 417 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 PCDHB11Q9Y5F2 797 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 HSPE1-MOB4S4R3N1 261 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 TARM1B6A8C7 271 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 I6L893 689 aaPredicted RBP5.59□□□□□ -1.51
VPS50-220ENST00000544910 CACNB4O00305 520 aaPredicted RBP5.59□□□□□ -1.51
VPS50-220ENST00000544910 DIRAS1O95057 198 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 OPN1SWP03999 348 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 SMIM18P0DKX4 95 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 PORP16435 677 aaPredicted RBP5.59□□□□□ -1.51
VPS50-220ENST00000544910 SPINT3P49223 89 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 FBXW4P57775 412 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 OR2B6P58173 313 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 FAM189BP81408 668 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 ZNF763Q0D2J5 394 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 VMACQ2NL98 169 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 ZNF438Q7Z4V0 828 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 RTN4RL1Q86UN2 441 aaPredicted RBP5.59□□□□□ -1.51
VPS50-220ENST00000544910 CCDC28AQ8IWP9 274 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 CPXM2Q8N436 756 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 ZNF614Q8N883 585 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 ZNF671Q8TAW3 534 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 RAD51AP1Q96B01 352 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 NACC2Q96BF6 587 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 RNF38Q9H0F5 515 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 KLHL1Q9NR64 748 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 SPHK2Q9NRA0 654 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 HCSTQ9UBK5 93 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 ITM2BQ9Y287 266 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 PMF1-BGLAPU3KQ54 211 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 URADA6NGE7 173 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 PSMD11O00231 422 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 AP3D1O14617 1153 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 TOR1BO14657 336 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 TFECO14948 347 aaPredicted RBP5.59□□□□□ -1.51
VPS50-220ENST00000544910 TSPAN6O43657 245 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 PLOD3O60568 738 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 PFKLP17858 780 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 STT3AP46977 705 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 GSTM4Q03013 218 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 ZNF33BQ06732 778 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 TMEM115Q12893 351 aaPredicted RBP5.59□□□□□ -1.51
VPS50-220ENST00000544910 SELPLGQ14242 412 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 LAPTM4AQ15012 233 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 ZNF630Q2M218 657 aaPredicted RBP5.59□□□□□ -1.51
VPS50-220ENST00000544910 IQCCQ4KMZ1 466 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 AMZ2Q86W34 360 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 TMIEQ8NEW7 156 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 CXorf40BQ96DE9 158 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 DUS3LQ96G46 650 aaKnown RBP5.59□□□□□ -1.51
VPS50-220ENST00000544910 APIPQ96GX9 242 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 MAPKAP1Q9BPZ7 522 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 CHCHD6Q9BRQ6 235 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 IRF2BPLQ9H1B7 796 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 TTYH1Q9H313 450 aaPredicted RBP5.59□□□□□ -1.51
VPS50-220ENST00000544910 WNT6Q9Y6F9 365 aa5.59□□□□□ -1.51
VPS50-220ENST00000544910 A0A0G2JPF8 293 aa5.59□□□□□ -1.52
VPS50-220ENST00000544910 ISM1B1AKI9 464 aa5.59□□□□□ -1.52
VPS50-220ENST00000544910 HNRNPCL3B7ZW38 293 aa5.59□□□□□ -1.52
VPS50-220ENST00000544910 VILLO15195 856 aa5.59□□□□□ -1.52
VPS50-220ENST00000544910 TGM5O43548 720 aa5.59□□□□□ -1.52
VPS50-220ENST00000544910 HNRNPCL4P0DMR1 293 aa5.59□□□□□ -1.52
VPS50-220ENST00000544910 CD9P21926 228 aa5.59□□□□□ -1.52
VPS50-220ENST00000544910 UQCRC2P22695 453 aa5.59□□□□□ -1.52
VPS50-220ENST00000544910 CMPK1P30085 196 aa5.59□□□□□ -1.52
VPS50-220ENST00000544910 TIA1P31483 386 aaKnown RBP eCLIP5.59□□□□□ -1.52
VPS50-220ENST00000544910 SEPHS1P49903 392 aa5.59□□□□□ -1.52
VPS50-220ENST00000544910 GNG2P59768 71 aa5.59□□□□□ -1.52
VPS50-220ENST00000544910 PIGFQ07326 219 aa5.59□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms