RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 SLC23A3Q6PIS1 610 aa29.08■■■□□ 2.25
CCM2-219ENST00000544363 HACD2Q6Y1H2 254 aa29.08■■■□□ 2.25
CCM2-219ENST00000544363 GATAD2AQ86YP4 633 aa29.08■■■□□ 2.25
CCM2-219ENST00000544363 RIMKLAQ8IXN7 391 aa29.08■■■□□ 2.25
CCM2-219ENST00000544363 DUSP23Q9BVJ7 150 aa29.08■■■□□ 2.25
CCM2-219ENST00000544363 MMADHCQ9H3L0 296 aaPredicted RBP29.08■■■□□ 2.25
CCM2-219ENST00000544363 GAREM1Q9H706 876 aa29.08■■■□□ 2.25
CCM2-219ENST00000544363 IL21RQ9HBE5 538 aa29.08■■■□□ 2.25
CCM2-219ENST00000544363 MCM8Q9UJA3 840 aa29.08■■■□□ 2.25
CCM2-219ENST00000544363 ASPDHA6ND91 283 aa29.07■■■□□ 2.24
CCM2-219ENST00000544363 LRIT2A6NDA9 550 aa29.07■■■□□ 2.24
CCM2-219ENST00000544363 CFLARO15519 480 aa29.07■■■□□ 2.24
CCM2-219ENST00000544363 PVRP15151 417 aa29.07■■■□□ 2.24
CCM2-219ENST00000544363 PRPS1L1P21108 318 aa29.07■■■□□ 2.24
CCM2-219ENST00000544363 HNRNPH1P31943 449 aaKnown RBP29.07■■■□□ 2.24
CCM2-219ENST00000544363 RAP1GDS1P52306 607 aa29.07■■■□□ 2.24
CCM2-219ENST00000544363 LPAL2Q16609 132 aa29.07■■■□□ 2.24
CCM2-219ENST00000544363 TMEM35AQ53FP2 167 aa29.07■■■□□ 2.24
CCM2-219ENST00000544363 TRIM61Q5EBN2 209 aa29.07■■■□□ 2.24
CCM2-219ENST00000544363 RIPOR1Q6ZS17 1223 aa29.07■■■□□ 2.24
CCM2-219ENST00000544363 PGAM4Q8N0Y7 254 aa29.07■■■□□ 2.24
CCM2-219ENST00000544363 ARHGAP24Q8N264 748 aa29.07■■■□□ 2.24
CCM2-219ENST00000544363 RGMAQ96B86 450 aa29.07■■■□□ 2.24
CCM2-219ENST00000544363 THTPAQ9BU02 230 aa29.07■■■□□ 2.24
CCM2-219ENST00000544363 REXO4Q9GZR2 422 aaKnown RBP29.07■■■□□ 2.24
CCM2-219ENST00000544363 KLHL25Q9H0H3 589 aa29.07■■■□□ 2.24
CCM2-219ENST00000544363 SEMA6CQ9H3T2 930 aa29.07■■■□□ 2.24
CCM2-219ENST00000544363 SYNPO2LQ9H987 977 aa29.07■■■□□ 2.24
CCM2-219ENST00000544363 MAP10Q9P2G4 905 aa29.07■■■□□ 2.24
CCM2-219ENST00000544363 LEF1Q9UJU2 399 aaPredicted RBP29.07■■■□□ 2.24
CCM2-219ENST00000544363 PILRAQ9UKJ1 303 aa29.07■■■□□ 2.24
CCM2-219ENST00000544363 H0YHG0 523 aa29.06■■■□□ 2.24
CCM2-219ENST00000544363 CTSVO60911 334 aa29.06■■■□□ 2.24
CCM2-219ENST00000544363 IL6P05231 212 aa29.06■■■□□ 2.24
CCM2-219ENST00000544363 KLK1P06870 262 aa29.06■■■□□ 2.24
CCM2-219ENST00000544363 DGKQP52824 942 aa29.06■■■□□ 2.24
CCM2-219ENST00000544363 C21orf58P58505 322 aa29.06■■■□□ 2.24
CCM2-219ENST00000544363 FAM174BQ3ZCQ3 159 aa29.06■■■□□ 2.24
CCM2-219ENST00000544363 TESCQ96BS2 214 aa29.06■■■□□ 2.24
CCM2-219ENST00000544363 ROPN1LQ96C74 230 aa29.06■■■□□ 2.24
CCM2-219ENST00000544363 THAP11Q96EK4 314 aa29.06■■■□□ 2.24
CCM2-219ENST00000544363 ZNF717Q9BY31 904 aaPredicted RBP29.06■■■□□ 2.24
CCM2-219ENST00000544363 WDR41Q9HAD4 459 aa29.06■■■□□ 2.24
CCM2-219ENST00000544363 KMT2EQ8IZD2 1858 aa29.06■■■□□ 2.24
CCM2-219ENST00000544363 A0A0C4DFX4 3053 aa29.06■■■□□ 2.24
CCM2-219ENST00000544363 CABIN1Q9Y6J0 2220 aa29.06■■■□□ 2.24
CCM2-219ENST00000544363 MDC1Q14676 2089 aaKnown RBP29.06■■■□□ 2.24
CCM2-219ENST00000544363 FAM86C2PA6NEL3 165 aa29.05■■■□□ 2.24
CCM2-219ENST00000544363 LRATO95237 230 aa29.05■■■□□ 2.24
CCM2-219ENST00000544363 ALPPL2P10696 532 aa29.05■■■□□ 2.24
CCM2-219ENST00000544363 GLB1P16278 677 aa29.05■■■□□ 2.24
CCM2-219ENST00000544363 BSGP35613 385 aa29.05■■■□□ 2.24
CCM2-219ENST00000544363 ZNF763Q0D2J5 394 aa29.05■■■□□ 2.24
CCM2-219ENST00000544363 HYAL2Q12891 473 aa29.05■■■□□ 2.24
CCM2-219ENST00000544363 ADPRMQ3LIE5 342 aa29.05■■■□□ 2.24
CCM2-219ENST00000544363 SPANXN4Q5MJ08 99 aa29.05■■■□□ 2.24
CCM2-219ENST00000544363 ZCCHC8Q6NZY4 707 aaKnown RBP29.05■■■□□ 2.24
CCM2-219ENST00000544363 PAGE2Q7Z2X7 111 aa29.05■■■□□ 2.24
CCM2-219ENST00000544363 FCRL4Q96PJ5 515 aa29.05■■■□□ 2.24
CCM2-219ENST00000544363 OR2A5Q96R48 311 aa29.05■■■□□ 2.24
CCM2-219ENST00000544363 SORBS1Q9BX66 1292 aaKnown RBP29.05■■■□□ 2.24
CCM2-219ENST00000544363 AICDAQ9GZX7 198 aa29.05■■■□□ 2.24
CCM2-219ENST00000544363 GBAP04062 536 aa29.05■■■□□ 2.24
CCM2-219ENST00000544363 IRGCQ6NXR0 463 aa29.05■■■□□ 2.24
CCM2-219ENST00000544363 VN1R4Q7Z5H5 301 aa29.05■■■□□ 2.24
CCM2-219ENST00000544363 UBE3DQ7Z6J8 389 aa29.05■■■□□ 2.24
CCM2-219ENST00000544363 CDC26Q8NHZ8 85 aa29.05■■■□□ 2.24
CCM2-219ENST00000544363 SLC13A3Q8WWT9 602 aa29.05■■■□□ 2.24
CCM2-219ENST00000544363 GFM2Q969S9 779 aaKnown RBP29.05■■■□□ 2.24
CCM2-219ENST00000544363 MAPRE3Q9UPY8 281 aa29.05■■■□□ 2.24
CCM2-219ENST00000544363 ARHGAP33O14559 1287 aa29.04■■■□□ 2.24
CCM2-219ENST00000544363 AKAP10O43572 662 aa29.04■■■□□ 2.24
CCM2-219ENST00000544363 KLHL18O94889 574 aa29.04■■■□□ 2.24
CCM2-219ENST00000544363 STATHP02808 62 aa29.04■■■□□ 2.24
CCM2-219ENST00000544363 PGRP06401 933 aa29.04■■■□□ 2.24
CCM2-219ENST00000544363 CDH3P22223 829 aa29.04■■■□□ 2.24
CCM2-219ENST00000544363 ALDH4A1P30038 563 aa29.04■■■□□ 2.24
CCM2-219ENST00000544363 HKDC1Q2TB90 917 aa29.04■■■□□ 2.24
CCM2-219ENST00000544363 PAGE3Q5JUK9 113 aa29.04■■■□□ 2.24
CCM2-219ENST00000544363 ASPGQ86U10 573 aa29.04■■■□□ 2.24
CCM2-219ENST00000544363 OR4C6Q8NH72 309 aa29.04■■■□□ 2.24
CCM2-219ENST00000544363 QRFPRQ96P65 431 aa29.04■■■□□ 2.24
CCM2-219ENST00000544363 ZFYVE21Q9BQ24 234 aa29.04■■■□□ 2.24
CCM2-219ENST00000544363 MACROD1Q9BQ69 325 aa29.04■■■□□ 2.24
CCM2-219ENST00000544363 KLHL31Q9H511 634 aa29.04■■■□□ 2.24
CCM2-219ENST00000544363 SEC23IPQ9Y6Y8 1000 aaKnown RBP29.04■■■□□ 2.24
CCM2-219ENST00000544363 A0A0J9YVX5 310 aa29.03■■■□□ 2.24
CCM2-219ENST00000544363 RTCAO00442 366 aaKnown RBP29.03■■■□□ 2.24
CCM2-219ENST00000544363 GALR2O43603 387 aaPredicted RBP29.03■■■□□ 2.24
CCM2-219ENST00000544363 CER1O95813 267 aa29.03■■■□□ 2.24
CCM2-219ENST00000544363 TPP2P29144 1249 aaPredicted RBP29.03■■■□□ 2.24
CCM2-219ENST00000544363 GPR3P46089 330 aa29.03■■■□□ 2.24
CCM2-219ENST00000544363 CCT8P50990 548 aa29.03■■■□□ 2.24
CCM2-219ENST00000544363 RNF44Q7L0R7 432 aa29.03■■■□□ 2.24
CCM2-219ENST00000544363 PUM2Q8TB72 1066 aaKnown RBP eCLIP29.03■■■□□ 2.24
CCM2-219ENST00000544363 NT5CQ8TCD5 201 aa29.03■■■□□ 2.24
CCM2-219ENST00000544363 C16orf78Q8WTQ4 265 aa29.03■■■□□ 2.24
CCM2-219ENST00000544363 STARD8Q92502 1023 aa29.03■■■□□ 2.24
CCM2-219ENST00000544363 MS4A6EQ96DS6 147 aa29.03■■■□□ 2.24
CCM2-219ENST00000544363 TM4SF19Q96DZ7 209 aa29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms