RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 DRC3Q9H069 523 aa14.35□□□□□ -0.11
CD9-210ENST00000543916 IQCGQ9H095 443 aaKnown RBP14.35□□□□□ -0.11
CD9-210ENST00000543916 ACTR8Q9H981 624 aa14.35□□□□□ -0.11
CD9-210ENST00000543916 IFT80Q9P2H3 777 aaPredicted RBP14.35□□□□□ -0.11
CD9-210ENST00000543916 RNF11Q9Y3C5 154 aa14.35□□□□□ -0.11
CD9-210ENST00000543916 MAU2Q9Y6X3 613 aa14.35□□□□□ -0.11
CD9-210ENST00000543916 LAMA5O15230 3695 aa14.35□□□□□ -0.11
CD9-210ENST00000543916 ACACAQ13085 2346 aa14.35□□□□□ -0.11
CD9-210ENST00000543916 UGDHO60701 494 aa14.34□□□□□ -0.11
CD9-210ENST00000543916 CNOT3O75175 753 aaKnown RBP14.34□□□□□ -0.11
CD9-210ENST00000543916 SUPT7LO94864 414 aa14.34□□□□□ -0.11
CD9-210ENST00000543916 TBX6O95947 436 aaPredicted RBP14.34□□□□□ -0.11
CD9-210ENST00000543916 ONECUT2O95948 504 aa14.34□□□□□ -0.11
CD9-210ENST00000543916 RAB40ALP0C0E4 278 aa14.34□□□□□ -0.11
CD9-210ENST00000543916 IL1RNP18510 177 aa14.34□□□□□ -0.11
CD9-210ENST00000543916 HNRNPH1P31943 449 aaKnown RBP14.34□□□□□ -0.11
CD9-210ENST00000543916 HNF4AP41235 474 aa14.34□□□□□ -0.11
CD9-210ENST00000543916 CCNG1P51959 295 aa14.34□□□□□ -0.11
CD9-210ENST00000543916 TMPRSS3P57727 454 aa14.34□□□□□ -0.11
CD9-210ENST00000543916 CLCQ05315 142 aa14.34□□□□□ -0.11
CD9-210ENST00000543916 RGS1Q08116 209 aa14.34□□□□□ -0.11
CD9-210ENST00000543916 FAM53BQ14153 422 aa14.34□□□□□ -0.11
CD9-210ENST00000543916 PCLAFQ15004 111 aa14.34□□□□□ -0.11
CD9-210ENST00000543916 NCF4Q15080 339 aa14.34□□□□□ -0.11
CD9-210ENST00000543916 RBBP7Q16576 425 aa14.34□□□□□ -0.11
CD9-210ENST00000543916 HIST2H2ACQ16777 129 aaPredicted RBP14.34□□□□□ -0.11
CD9-210ENST00000543916 NDUFA9Q16795 377 aa14.34□□□□□ -0.11
CD9-210ENST00000543916 TOR1AIP1Q5JTV8 583 aa14.34□□□□□ -0.11
CD9-210ENST00000543916 FAM69BQ5VUD6 431 aa14.34□□□□□ -0.11
CD9-210ENST00000543916 LIPJQ5W064 366 aa14.34□□□□□ -0.11
CD9-210ENST00000543916 FAM219BQ5XKK7 198 aa14.34□□□□□ -0.11
CD9-210ENST00000543916 HIST2H2AA3Q6FI13 130 aa14.34□□□□□ -0.11
CD9-210ENST00000543916 MED27Q6P2C8 311 aa14.34□□□□□ -0.11
CD9-210ENST00000543916 PRMT9Q6P2P2 845 aa14.34□□□□□ -0.11
CD9-210ENST00000543916 CCDC81Q6ZN84 652 aa14.34□□□□□ -0.11
CD9-210ENST00000543916 PDSS2Q86YH6 399 aa14.34□□□□□ -0.11
CD9-210ENST00000543916 MYLK4Q86YV6 388 aaPredicted RBP14.34□□□□□ -0.11
CD9-210ENST00000543916 TMEM151BQ8IW70 566 aa14.34□□□□□ -0.11
CD9-210ENST00000543916 ENDOVQ8N8Q3 282 aaKnown RBP14.34□□□□□ -0.11
CD9-210ENST00000543916 TTLQ8NG68 377 aa14.34□□□□□ -0.11
CD9-210ENST00000543916 OR7G3Q8NG95 312 aa14.34□□□□□ -0.11
CD9-210ENST00000543916 OR9A4Q8NGU2 314 aa14.34□□□□□ -0.11
CD9-210ENST00000543916 TRPC4APQ8TEL6 797 aa14.34□□□□□ -0.11
CD9-210ENST00000543916 CCDC126Q96EE4 140 aa14.34□□□□□ -0.11
CD9-210ENST00000543916 MVB12AQ96EY5 273 aa14.34□□□□□ -0.11
CD9-210ENST00000543916 NTMT1Q9BV86 223 aa14.34□□□□□ -0.11
CD9-210ENST00000543916 RHBGQ9H310 441 aa14.34□□□□□ -0.11
CD9-210ENST00000543916 GSTO2Q9H4Y5 243 aa14.34□□□□□ -0.11
CD9-210ENST00000543916 KLHL31Q9H511 634 aa14.34□□□□□ -0.11
CD9-210ENST00000543916 ACTL8Q9H568 366 aa14.34□□□□□ -0.11
CD9-210ENST00000543916 ZNF304Q9HCX3 659 aa14.34□□□□□ -0.11
CD9-210ENST00000543916 ARGLU1Q9NWB6 273 aaPredicted RBP14.34□□□□□ -0.11
CD9-210ENST00000543916 OXSMQ9NWU1 459 aa14.34□□□□□ -0.11
CD9-210ENST00000543916 PCDHGA6Q9Y5G7 932 aa14.34□□□□□ -0.11
CD9-210ENST00000543916 DSPP15924 2871 aaKnown RBP14.33□□□□□ -0.11
CD9-210ENST00000543916 AHCTF1Q8WYP5 2266 aa14.33□□□□□ -0.12
CD9-210ENST00000543916 ANKDD1BA6NHY2 528 aa14.33□□□□□ -0.12
CD9-210ENST00000543916 C9J4A7 227 aa14.33□□□□□ -0.12
CD9-210ENST00000543916 AGPSO00116 658 aa14.33□□□□□ -0.12
CD9-210ENST00000543916 CLEC3AO75596 197 aa14.33□□□□□ -0.12
CD9-210ENST00000543916 CLDN9O95484 217 aa14.33□□□□□ -0.12
CD9-210ENST00000543916 B3GALT4O96024 378 aa14.33□□□□□ -0.12
CD9-210ENST00000543916 SERPINA6P08185 405 aa14.33□□□□□ -0.12
CD9-210ENST00000543916 MYZAPP0CAP1 466 aa14.33□□□□□ -0.12
CD9-210ENST00000543916 ZNF888P0CJ79 500 aaPredicted RBP14.33□□□□□ -0.12
CD9-210ENST00000543916 PCNAP12004 261 aa14.33□□□□□ -0.12
CD9-210ENST00000543916 GSTM2P28161 218 aa14.33□□□□□ -0.12
CD9-210ENST00000543916 PTPN4P29074 926 aa14.33□□□□□ -0.12
CD9-210ENST00000543916 ARL1P40616 181 aaPredicted RBP14.33□□□□□ -0.12
CD9-210ENST00000543916 UCNP55089 124 aa14.33□□□□□ -0.12
CD9-210ENST00000543916 FOXL2P58012 376 aa14.33□□□□□ -0.12
CD9-210ENST00000543916 ARHGAP40Q5TG30 622 aa14.33□□□□□ -0.12
CD9-210ENST00000543916 MLIPQ5VWP3 458 aa14.33□□□□□ -0.12
CD9-210ENST00000543916 MRPL14Q6P1L8 145 aaKnown RBP14.33□□□□□ -0.12
CD9-210ENST00000543916 C19orf48Q6RUI8 117 aa14.33□□□□□ -0.12
CD9-210ENST00000543916 SHISA5Q8N114 240 aa14.33□□□□□ -0.12
CD9-210ENST00000543916 RNF175Q8N4F7 328 aa14.33□□□□□ -0.12
CD9-210ENST00000543916 AFAP1L2Q8N4X5 818 aa14.33□□□□□ -0.12
CD9-210ENST00000543916 CCNYL1Q8N7R7 359 aa14.33□□□□□ -0.12
CD9-210ENST00000543916 AMER3Q8N944 861 aa14.33□□□□□ -0.12
CD9-210ENST00000543916 OR4F6Q8NGB9 312 aa14.33□□□□□ -0.12
CD9-210ENST00000543916 UTP15Q8TED0 518 aaKnown RBP14.33□□□□□ -0.12
CD9-210ENST00000543916 PPP4R1Q8TF05 950 aa14.33□□□□□ -0.12
CD9-210ENST00000543916 STARD8Q92502 1023 aa14.33□□□□□ -0.12
CD9-210ENST00000543916 CCT6BQ92526 530 aa14.33□□□□□ -0.12
CD9-210ENST00000543916 ATP6V1E2Q96A05 226 aa14.33□□□□□ -0.12
CD9-210ENST00000543916 MMABQ96EY8 250 aaPredicted RBP14.33□□□□□ -0.12
CD9-210ENST00000543916 SLC45A3Q96JT2 553 aa14.33□□□□□ -0.12
CD9-210ENST00000543916 EFHD1Q9BUP0 239 aa14.33□□□□□ -0.12
CD9-210ENST00000543916 GPR87Q9BY21 358 aa14.33□□□□□ -0.12
CD9-210ENST00000543916 TMBIM4Q9HC24 238 aa14.33□□□□□ -0.12
CD9-210ENST00000543916 SSU72Q9NP77 194 aaKnown RBP14.33□□□□□ -0.12
CD9-210ENST00000543916 CTSFQ9UBX1 484 aa14.33□□□□□ -0.12
CD9-210ENST00000543916 MID2Q9UJV3 735 aa14.33□□□□□ -0.12
CD9-210ENST00000543916 ZNF225Q9UK10 706 aa14.33□□□□□ -0.12
CD9-210ENST00000543916 KCND3Q9UK17 655 aa14.33□□□□□ -0.12
CD9-210ENST00000543916 FARSAQ9Y285 508 aaKnown RBP14.33□□□□□ -0.12
CD9-210ENST00000543916 SLC22A7Q9Y694 548 aa14.33□□□□□ -0.12
CD9-210ENST00000543916 NUP210LQ5VU65 1888 aa14.33□□□□□ -0.12
CD9-210ENST00000543916 URB1O60287 2271 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 251.7 ms