RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 SNX6Q9UNH7 406 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 RNF11Q9Y3C5 154 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 FIS1Q9Y3D6 152 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 TMEM184BQ9Y519 407 aaPredicted RBP6.02□□□□□ -1.45
LTBR-212ENST00000543542 MAU2Q9Y6X3 613 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 HEATR5BQ9P2D3 2071 aa6.02□□□□□ -1.45
LTBR-212ENST00000543542 A0A088AWK7 358 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 A0A0A6YYC8 382 aaPredicted RBP6.01□□□□□ -1.45
LTBR-212ENST00000543542 FITM1A5D6W6 292 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 H3BQF6 201 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 I3L1I5 382 aaPredicted RBP6.01□□□□□ -1.45
LTBR-212ENST00000543542 SAP18O00422 153 aaKnown RBP6.01□□□□□ -1.45
LTBR-212ENST00000543542 ERI3O43414 337 aaKnown RBP6.01□□□□□ -1.45
LTBR-212ENST00000543542 CLEC3AO75596 197 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 WFS1O76024 890 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 HSPA4LO95757 839 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 DLGAP3O95886 979 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 CHEK2O96017 543 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 TGFB1P01137 390 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 KRT6AP02538 564 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 KRT6BP04259 564 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 CAPN1P07384 714 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 SERPINA6P08185 405 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 CD63P08962 238 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 ZNF888P0CJ79 500 aaPredicted RBP6.01□□□□□ -1.45
LTBR-212ENST00000543542 IL1RNP18510 177 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 EPORP19235 508 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 CD22P20273 847 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 ZNF10P21506 573 aaPredicted RBP6.01□□□□□ -1.45
LTBR-212ENST00000543542 SERPINB1P30740 379 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 EIF2S3P41091 472 aaKnown RBP6.01□□□□□ -1.45
LTBR-212ENST00000543542 CASP2P42575 452 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 OR1D4P47884 311 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 SERPINB4P48594 390 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 KRT6CP48668 564 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 PLA2G16P53816 162 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 RAB8AP61006 207 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 BTN3A2P78410 334 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 OCA2Q04671 838 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 PWP1Q13610 501 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 MAP7Q14244 749 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 HERC3Q15034 1050 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 CHI3L2Q15782 390 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 IMPG1Q17R60 797 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 PRTGQ2VWP7 1150 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 TTMPQ5BVD1 217 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 TNFAIP8L3Q5GJ75 292 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 NIPAL1Q6NVV3 410 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 PRMT9Q6P2P2 845 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 TRIM40Q6P9F5 258 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 ZCCHC23Q6ZST2 131 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 FRMD7Q6ZUT3 714 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 TIPARPQ7Z3E1 657 aaKnown RBP6.01□□□□□ -1.45
LTBR-212ENST00000543542 VN1R4Q7Z5H5 301 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 SYVN1Q86TM6 617 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 VASH2Q86V25 355 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 LAS2Q8IYD9 372 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 ZSCAN1Q8NBB4 408 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 SLC38A9Q8NBW4 561 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 KCT2Q8NC54 265 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 SRFBP1Q8NEF9 429 aaKnown RBP6.01□□□□□ -1.45
LTBR-212ENST00000543542 OR7G3Q8NG95 312 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 OR9A4Q8NGU2 314 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 SNIP1Q8TAD8 396 aaKnown RBP6.01□□□□□ -1.45
LTBR-212ENST00000543542 NT5CQ8TCD5 201 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 CT55Q8WUE5 264 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 SELENOMQ8WWX9 145 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 NKD1Q969G9 470 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 TLCD1Q96CP7 247 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 TM4SF19Q96DZ7 209 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 WDR34Q96EX3 536 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 CMTM7Q96FZ5 175 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 SEC16BQ96JE7 1060 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 CNDP1Q96KN2 507 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 ZNF285Q96NJ3 590 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 ZNF382Q96SR6 550 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 MTERF1Q99551 399 aaKnown RBP6.01□□□□□ -1.45
LTBR-212ENST00000543542 DPH2Q9BQC3 489 aaPredicted RBP6.01□□□□□ -1.45
LTBR-212ENST00000543542 EFHD1Q9BUP0 239 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 SARGQ9BW04 601 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 GATA5Q9BWX5 397 aaPredicted RBP6.01□□□□□ -1.45
LTBR-212ENST00000543542 REXO4Q9GZR2 422 aaKnown RBP6.01□□□□□ -1.45
LTBR-212ENST00000543542 CHST8Q9H2A9 424 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 RHBGQ9H310 441 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 GSTO2Q9H4Y5 243 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 ZBTB26Q9HCK0 441 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 DKK4Q9UBT3 224 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 TRPS1Q9UHF7 1281 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 KCND3Q9UK17 655 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 CROTQ9UKG9 612 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 ZNF490Q9ULM2 529 aaPredicted RBP6.01□□□□□ -1.45
LTBR-212ENST00000543542 PADI2Q9Y2J8 665 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 RAXQ9Y2V3 346 aa6.01□□□□□ -1.45
LTBR-212ENST00000543542 CNOT1A5YKK6 2376 aaKnown RBP6.01□□□□□ -1.45
LTBR-212ENST00000543542 SDK2Q58EX2 2172 aa6□□□□□ -1.45
LTBR-212ENST00000543542 AKAP13Q12802 2813 aa6□□□□□ -1.45
LTBR-212ENST00000543542 A0A0G2JN53 185 aa6□□□□□ -1.45
LTBR-212ENST00000543542 LOC101059948A0A1B0GTJ6 334 aa6□□□□□ -1.45
LTBR-212ENST00000543542 ZNF860A6NHJ4 632 aa6□□□□□ -1.45
LTBR-212ENST00000543542 H0YIV9 168 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms