RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 RNF11Q9Y3C5 154 aa16.28■□□□□ 0.2
RABGGTA-203ENST00000543002 SLC22A7Q9Y694 548 aa16.28■□□□□ 0.2
RABGGTA-203ENST00000543002 ASPMQ8IZT6 3477 aa16.28■□□□□ 0.2
RABGGTA-203ENST00000543002 H0YIV9 168 aa16.27■□□□□ 0.2
RABGGTA-203ENST00000543002 PPP6CO00743 305 aa16.27■□□□□ 0.2
RABGGTA-203ENST00000543002 TERTO14746 1132 aaKnown RBP16.27■□□□□ 0.2
RABGGTA-203ENST00000543002 TM9SF1O15321 606 aa16.27■□□□□ 0.2
RABGGTA-203ENST00000543002 PRPF4O43172 522 aaKnown RBP eCLIP16.27■□□□□ 0.22e-6■□□□□ 10
RABGGTA-203ENST00000543002 FOXS1O43638 330 aa16.27■□□□□ 0.2
RABGGTA-203ENST00000543002 CLEC3AO75596 197 aa16.27■□□□□ 0.2
RABGGTA-203ENST00000543002 MLYCDO95822 493 aa16.27■□□□□ 0.2
RABGGTA-203ENST00000543002 TCN2P20062 427 aa16.27■□□□□ 0.2
RABGGTA-203ENST00000543002 ITGAXP20702 1163 aa16.27■□□□□ 0.2
RABGGTA-203ENST00000543002 SERPINB1P30740 379 aa16.27■□□□□ 0.2
RABGGTA-203ENST00000543002 ARL1P40616 181 aaPredicted RBP16.27■□□□□ 0.2
RABGGTA-203ENST00000543002 NAGLUP54802 743 aa16.27■□□□□ 0.2
RABGGTA-203ENST00000543002 HYAL2Q12891 473 aa16.27■□□□□ 0.2
RABGGTA-203ENST00000543002 AGBL2Q5U5Z8 902 aa16.27■□□□□ 0.2
RABGGTA-203ENST00000543002 VN1R5Q7Z5H4 357 aa16.27■□□□□ 0.2
RABGGTA-203ENST00000543002 MILR1Q7Z6M3 343 aa16.27■□□□□ 0.2
RABGGTA-203ENST00000543002 VASH2Q86V25 355 aa16.27■□□□□ 0.2
RABGGTA-203ENST00000543002 DTWD1Q8N5C7 304 aa16.27■□□□□ 0.2
RABGGTA-203ENST00000543002 CCNYL1Q8N7R7 359 aa16.27■□□□□ 0.2
RABGGTA-203ENST00000543002 OR4F6Q8NGB9 312 aa16.27■□□□□ 0.2
RABGGTA-203ENST00000543002 KIAA1143Q96AT1 154 aaPredicted RBP16.27■□□□□ 0.2
RABGGTA-203ENST00000543002 PKNOX2Q96KN3 472 aa16.27■□□□□ 0.2
RABGGTA-203ENST00000543002 MAGEB10Q96LZ2 347 aaPredicted RBP16.27■□□□□ 0.2
RABGGTA-203ENST00000543002 CDK15Q96Q40 435 aa16.27■□□□□ 0.2
RABGGTA-203ENST00000543002 CCNL2Q96S94 520 aaPredicted RBP16.27■□□□□ 0.2
RABGGTA-203ENST00000543002 ZNF382Q96SR6 550 aa16.27■□□□□ 0.2
RABGGTA-203ENST00000543002 C17orf62Q9BQA9 187 aa16.27■□□□□ 0.2
RABGGTA-203ENST00000543002 FAM117AQ9C073 453 aa16.27■□□□□ 0.2
RABGGTA-203ENST00000543002 DRC3Q9H069 523 aa16.27■□□□□ 0.2
RABGGTA-203ENST00000543002 GSTO2Q9H4Y5 243 aa16.27■□□□□ 0.2
RABGGTA-203ENST00000543002 GPN2Q9H9Y4 310 aaPredicted RBP16.27■□□□□ 0.2
RABGGTA-203ENST00000543002 WDR70Q9NW82 654 aa16.27■□□□□ 0.2
RABGGTA-203ENST00000543002 STK38LQ9Y2H1 464 aa16.27■□□□□ 0.2
RABGGTA-203ENST00000543002 TSC22D4Q9Y3Q8 395 aa16.27■□□□□ 0.2
RABGGTA-203ENST00000543002 PCDHGA11Q9Y5H2 935 aa16.27■□□□□ 0.2
RABGGTA-203ENST00000543002 ANKRD11Q6UB99 2663 aaPredicted RBP16.26■□□□□ 0.19
RABGGTA-203ENST00000543002 URADA6NGE7 173 aa16.26■□□□□ 0.19
RABGGTA-203ENST00000543002 C21orf140B9A014 251 aa16.26■□□□□ 0.19
RABGGTA-203ENST00000543002 TRIM13O60858 407 aa16.26■□□□□ 0.19
RABGGTA-203ENST00000543002 CAPN1P07384 714 aa16.26■□□□□ 0.19
RABGGTA-203ENST00000543002 PIM1P11309 404 aaPredicted RBP16.26■□□□□ 0.19
RABGGTA-203ENST00000543002 PCNAP12004 261 aa16.26■□□□□ 0.19
RABGGTA-203ENST00000543002 LIFP15018 202 aa16.26■□□□□ 0.19
RABGGTA-203ENST00000543002 ALDH3A1P30838 453 aa16.26■□□□□ 0.19
RABGGTA-203ENST00000543002 DLSTP36957 453 aa16.26■□□□□ 0.19
RABGGTA-203ENST00000543002 MAGOHP61326 146 aaKnown RBP16.26■□□□□ 0.19
RABGGTA-203ENST00000543002 SNRPNP63162 240 aaKnown RBP16.26■□□□□ 0.19
RABGGTA-203ENST00000543002 TLE3Q04726 772 aa16.26■□□□□ 0.19
RABGGTA-203ENST00000543002 ASPHQ12797 758 aa16.26■□□□□ 0.19
RABGGTA-203ENST00000543002 LCP2Q13094 533 aa16.26■□□□□ 0.19
RABGGTA-203ENST00000543002 DNASE1L3Q13609 305 aa16.26■□□□□ 0.19
RABGGTA-203ENST00000543002 CPSF6Q16630 551 aaKnown RBP eCLIP16.26■□□□□ 0.19
RABGGTA-203ENST00000543002 GGTA1PQ4G0N0 100 aa16.26■□□□□ 0.19
RABGGTA-203ENST00000543002 ADNP2Q6IQ32 1131 aa16.26■□□□□ 0.19
RABGGTA-203ENST00000543002 FAM198BQ6UWH4 519 aa16.26■□□□□ 0.19
RABGGTA-203ENST00000543002 ZCCHC10Q8TBK6 192 aa16.26■□□□□ 0.19
RABGGTA-203ENST00000543002 ZNF473Q8WTR7 871 aaKnown RBP16.26■□□□□ 0.19
RABGGTA-203ENST00000543002 CCT6BQ92526 530 aa16.26■□□□□ 0.19
RABGGTA-203ENST00000543002 REPS1Q96D71 796 aa16.26■□□□□ 0.19
RABGGTA-203ENST00000543002 EFHD1Q9BUP0 239 aa16.26■□□□□ 0.19
RABGGTA-203ENST00000543002 ZNF304Q9HCX3 659 aa16.26■□□□□ 0.19
RABGGTA-203ENST00000543002 KCNK9Q9NPC2 374 aa16.26■□□□□ 0.19
RABGGTA-203ENST00000543002 SLC22A11Q9NSA0 550 aa16.26■□□□□ 0.19
RABGGTA-203ENST00000543002 ADGRE2Q9UHX3 823 aa16.26■□□□□ 0.19
RABGGTA-203ENST00000543002 FER1L5A0AVI2 2057 aa16.26■□□□□ 0.19
RABGGTA-203ENST00000543002 A0A0A6YYC8 382 aaPredicted RBP16.25■□□□□ 0.19
RABGGTA-203ENST00000543002 A0A1B0GTL3 188 aa16.25■□□□□ 0.19
RABGGTA-203ENST00000543002 LRIT2A6NDA9 550 aa16.25■□□□□ 0.19
RABGGTA-203ENST00000543002 SRRM3A6NNA2 597 aaPredicted RBP16.25■□□□□ 0.19
RABGGTA-203ENST00000543002 C9J4A7 227 aa16.25■□□□□ 0.19
RABGGTA-203ENST00000543002 I3L1I5 382 aaPredicted RBP16.25■□□□□ 0.19
RABGGTA-203ENST00000543002 ZWINTO95229 277 aa16.25■□□□□ 0.19
RABGGTA-203ENST00000543002 TBX6O95947 436 aaPredicted RBP16.25■□□□□ 0.19
RABGGTA-203ENST00000543002 RAB40ALP0C0E4 278 aa16.25■□□□□ 0.19
RABGGTA-203ENST00000543002 F8A1P23610 371 aa16.25■□□□□ 0.19
RABGGTA-203ENST00000543002 PIK3CBP42338 1070 aa16.25■□□□□ 0.19
RABGGTA-203ENST00000543002 OR1D4P47884 311 aa16.25■□□□□ 0.19
RABGGTA-203ENST00000543002 STXBP1P61764 594 aaKnown RBP16.25■□□□□ 0.19
RABGGTA-203ENST00000543002 SRSF6Q13247 344 aaKnown RBP16.25■□□□□ 0.19
RABGGTA-203ENST00000543002 MPP2Q14168 576 aa16.25■□□□□ 0.19
RABGGTA-203ENST00000543002 ZRSR2Q15696 482 aaKnown RBP16.25■□□□□ 0.19
RABGGTA-203ENST00000543002 TOR1AIP1Q5JTV8 583 aa16.25■□□□□ 0.19
RABGGTA-203ENST00000543002 CFAP157Q5JU67 520 aa16.25■□□□□ 0.19
RABGGTA-203ENST00000543002 BROXQ5VW32 411 aa16.25■□□□□ 0.19
RABGGTA-203ENST00000543002 LETMD1Q6P1Q0 360 aa16.25■□□□□ 0.19
RABGGTA-203ENST00000543002 FRMD7Q6ZUT3 714 aa16.25■□□□□ 0.19
RABGGTA-203ENST00000543002 GPRIN3Q6ZVF9 776 aa16.25■□□□□ 0.19
RABGGTA-203ENST00000543002 AFAP1L2Q8N4X5 818 aa16.25■□□□□ 0.19
RABGGTA-203ENST00000543002 METTL27Q8N6F8 245 aaPredicted RBP16.25■□□□□ 0.19
RABGGTA-203ENST00000543002 UTP15Q8TED0 518 aaKnown RBP16.25■□□□□ 0.19
RABGGTA-203ENST00000543002 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.25■□□□□ 0.19
RABGGTA-203ENST00000543002 ARL8AQ96BM9 186 aa16.25■□□□□ 0.19
RABGGTA-203ENST00000543002 SH3GL2Q99962 352 aa16.25■□□□□ 0.19
RABGGTA-203ENST00000543002 MECRQ9BV79 373 aa16.25■□□□□ 0.19
RABGGTA-203ENST00000543002 GATA5Q9BWX5 397 aaPredicted RBP16.25■□□□□ 0.19
RABGGTA-203ENST00000543002 GPR87Q9BY21 358 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms