RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 AIFM2Q9BRQ8 373 aa12.71□□□□□ -0.38
TNC-212ENST00000542877 TMEM175Q9BSA9 504 aa12.71□□□□□ -0.38
TNC-212ENST00000542877 TBL1XR1Q9BZK7 514 aa12.71□□□□□ -0.38
TNC-212ENST00000542877 ELOVL2Q9NXB9 296 aa12.71□□□□□ -0.38
TNC-212ENST00000542877 NLGN3Q9NZ94 848 aa12.71□□□□□ -0.38
TNC-212ENST00000542877 PCDHB3Q9Y5E6 796 aa12.71□□□□□ -0.38
TNC-212ENST00000542877 PCDHGB2Q9Y5G2 931 aa12.71□□□□□ -0.38
TNC-212ENST00000542877 A0A0U1RQF3 1178 aa12.71□□□□□ -0.38
TNC-212ENST00000542877 MAPK3P27361 379 aaPredicted RBP12.71□□□□□ -0.38
TNC-212ENST00000542877 ACTR1BP42025 376 aa12.71□□□□□ -0.38
TNC-212ENST00000542877 KCNQ1P51787 676 aa12.71□□□□□ -0.38
TNC-212ENST00000542877 ACTR1AP61163 376 aa12.71□□□□□ -0.38
TNC-212ENST00000542877 RPS3AP61247 264 aaKnown RBP12.71□□□□□ -0.38
TNC-212ENST00000542877 RPP38P78345 283 aaKnown RBP12.71□□□□□ -0.38
TNC-212ENST00000542877 SLC35G1Q2M3R5 365 aa12.71□□□□□ -0.38
TNC-212ENST00000542877 CCDC54Q8NEL0 328 aa12.71□□□□□ -0.38
TNC-212ENST00000542877 RHEBL1Q8TAI7 183 aa12.71□□□□□ -0.38
TNC-212ENST00000542877 THRSPQ92748 146 aa12.71□□□□□ -0.38
TNC-212ENST00000542877 PHOX2BQ99453 314 aa12.71□□□□□ -0.38
TNC-212ENST00000542877 IL12RB2Q99665 862 aa12.71□□□□□ -0.38
TNC-212ENST00000542877 MEAF6Q9HAF1 191 aa12.71□□□□□ -0.38
TNC-212ENST00000542877 HCN3Q9P1Z3 774 aa12.71□□□□□ -0.38
TNC-212ENST00000542877 FXYD6-FXYD2A0A087WZ82 144 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 SLC19A2O60779 497 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 CLIC3O95833 236 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 PABPC4LP0CB38 370 aaKnown RBP12.7□□□□□ -0.38
TNC-212ENST00000542877 RPS13P62277 151 aaKnown RBP12.7□□□□□ -0.38
TNC-212ENST00000542877 KCNAB2Q13303 367 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 SMU1Q2TAY7 513 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 ZNF227Q86WZ6 799 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 CLDN19Q8N6F1 224 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 SLC25A36Q96CQ1 311 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 FXYD6Q9H0Q3 95 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 NUDT15Q9NV35 164 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 GIMAP2Q9UG22 337 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 UPK3BL1B0FP48 263 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 UPK3BL2E5RIL1 263 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 POP7O75817 140 aaKnown RBP12.7□□□□□ -0.38
TNC-212ENST00000542877 C6orf47O95873 294 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 ELK4P28324 431 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 GRIA2P42262 883 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 SEC13P55735 322 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 NRG3P56975 720 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 SEC23BQ15437 767 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 SH3D19Q5HYK7 790 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 C6orf141Q5SZD1 244 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 SHQ1Q6PI26 577 aaKnown RBP12.7□□□□□ -0.38
TNC-212ENST00000542877 TICAM1Q8IUC6 712 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 KCT2Q8NC54 265 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 OR10Q1Q8NGQ4 319 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 ENAMQ9NRM1 1142 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 SERINC1Q9NRX5 453 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 HCN2Q9UL51 889 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 TMEM5Q9Y2B1 443 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 Q9Y3F1 56 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 A0A096LPI6 279 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 A0A1W2PRU2 124 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 NOTOA8MTQ0 251 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 CAPN5O15484 640 aaPredicted RBP12.7□□□□□ -0.38
TNC-212ENST00000542877 MT-ND5P03915 603 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 ALDOAP04075 364 aaKnown RBP12.7□□□□□ -0.38
TNC-212ENST00000542877 GADD45AP24522 165 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 ZNF763Q0D2J5 394 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 PPIGQ13427 754 aaKnown RBP eCLIP12.7□□□□□ -0.38
TNC-212ENST00000542877 ZNF181Q2M3W8 571 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 CHCHD4Q8N4Q1 142 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 S100A16Q96FQ6 103 aaKnown RBP12.7□□□□□ -0.38
TNC-212ENST00000542877 ZNF696Q9H7X3 374 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 C10orf71Q711Q0 1435 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 ZSCAN5BA6NJL1 495 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 ERP29P30040 261 aaKnown RBP12.7□□□□□ -0.38
TNC-212ENST00000542877 DIO3P55073 304 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 TECRLQ5HYJ1 363 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 FAM182AQ5T1J6 154 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 LRRC66Q68CR7 880 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 HACD2Q6Y1H2 254 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 OTOP2Q7RTS6 562 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 TCEANCQ8N8B7 351 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 ZNF675Q8TD23 568 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 DGAT2Q96PD7 388 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 CARS2Q9HA77 564 aaKnown RBP12.7□□□□□ -0.38
TNC-212ENST00000542877 MS4A12Q9NXJ0 267 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 ADAMTS6Q9UKP5 1117 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 CDH10Q9Y6N8 788 aa12.7□□□□□ -0.38
TNC-212ENST00000542877 SOX14O95416 240 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 SNAP29O95721 258 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 CH25HO95992 272 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 CLUP10909 449 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 TRAM2Q15035 370 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 PPP1R3AQ16821 1122 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 SNX29P2Q8IUI4 249 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 DCAF4L2Q8NA75 395 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 GNPDA2Q8TDQ7 276 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 C1orf74Q96LT6 269 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 FAM129BQ96TA1 746 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 ADAM7Q9H2U9 754 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 HPF1Q9NWY4 346 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 DNAJC27Q9NZQ0 273 aa12.69□□□□□ -0.38
TNC-212ENST00000542877 CNOT11Q9UKZ1 510 aaKnown RBP12.69□□□□□ -0.38
TNC-212ENST00000542877 CDC14AQ9UNH5 594 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms