RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 RHBDF2Q6PJF5 856 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 PRSS57Q6UWY2 283 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 OLFM4Q6UX06 510 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 Q75L30 129 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 C16orf82Q7Z2V1 217 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 ATG9AQ7Z3C6 839 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 NUDT13Q86X67 352 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 AQP12AQ8IXF9 295 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 GPALPP1Q8IXQ4 340 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 PGBD5Q8N414 524 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 CPSF7Q8N684 471 aaKnown RBP3.93□□□□□ -1.78
SNHG1-217ENST00000541578 L3MBTL4Q8NA19 623 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 SPATA3Q8NHX4 192 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 KIAA1524Q8TCG1 905 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 BCL2L2Q92843 193 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-217ENST00000541578 TSACCQ96A04 125 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-217ENST00000541578 SNRNP40Q96DI7 357 aaKnown RBP3.93□□□□□ -1.78
SNHG1-217ENST00000541578 RTP4Q96DX8 246 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 ZNF560Q96MR9 790 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 PANX3Q96QZ0 392 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 FAM213AQ9BRX8 229 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 DDX47Q9H0S4 455 aaKnown RBP3.93□□□□□ -1.78
SNHG1-217ENST00000541578 SYTL2Q9HCH5 934 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 Q9N2K0 584 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 DNAJC4Q9NNZ3 241 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 SLC38A7Q9NVC3 462 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 FAM118AQ9NWS6 357 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 SPHK1Q9NYA1 384 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 CYP39A1Q9NYL5 469 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 SH3BGRL2Q9UJC5 107 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 CCPG1Q9ULG6 757 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 KCNS2Q9ULS6 477 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 GPR132Q9UNW8 380 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 PIN4Q9Y237 131 aaKnown RBP3.93□□□□□ -1.78
SNHG1-217ENST00000541578 EXOC6BQ9Y2D4 811 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 RPH3AQ9Y2J0 694 aaPredicted RBP3.93□□□□□ -1.78
SNHG1-217ENST00000541578 AP1M2Q9Y6Q5 423 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 ITGB4P16144 1822 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 VIRMAQ69YN4 1812 aaKnown RBP3.93□□□□□ -1.78
SNHG1-217ENST00000541578 ADGRB1O14514 1584 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 PDS5AQ29RF7 1337 aaKnown RBP3.93□□□□□ -1.78
SNHG1-217ENST00000541578 PCDH11XQ9BZA7 1347 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 PCDH11YQ9BZA8 1340 aa3.93□□□□□ -1.78
SNHG1-217ENST00000541578 BRCA1P38398 1863 aaKnown RBP3.92□□□□□ -1.78
SNHG1-217ENST00000541578 NSD2O96028 1365 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 CNTNAP1P78357 1384 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 TRBV2A0A0J9YWF9 115 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 ZCWPW2A0A1B0GU75 182 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 SLC9B1P1A6NJY1 282 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 PLOD2O00469 737 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 MID1O15344 667 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 PRAF2O60831 178 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 ZBTB11O95625 1053 aaPredicted RBP3.92□□□□□ -1.78
SNHG1-217ENST00000541578 PPP1R3DO95685 299 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 ABHD2P08910 425 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 ANKRD34CP0C6C1 535 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 SP9P0CG40 484 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 GHRP10912 638 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 ACP2P11117 423 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 HSPA8P11142 646 aaKnown RBP3.92□□□□□ -1.78
SNHG1-217ENST00000541578 ZNF18P17022 549 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 SSTR1P30872 391 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 MAP2K2P36507 400 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 CETN2P41208 172 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 CDX1P47902 265 aaPredicted RBP3.92□□□□□ -1.78
SNHG1-217ENST00000541578 SMSP52788 366 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 SLC34A1Q06495 639 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 IL10RBQ08334 325 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 DMPKQ09013 629 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 PNRC1Q12796 327 aaPredicted RBP3.92□□□□□ -1.78
SNHG1-217ENST00000541578 CETN1Q12798 172 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 ZNF155Q12901 538 aaPredicted RBP3.92□□□□□ -1.78
SNHG1-217ENST00000541578 TRAF3Q13114 568 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 MYBPHQ13203 477 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 HFEQ30201 348 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 RAB6CQ53S08 254 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 GRTP1Q5TC63 336 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 FUT10Q6P4F1 479 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 SPSB3Q6PJ21 355 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 MFSD7Q6UXD7 560 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 RAD9BQ6WBX8 426 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 DGLUCYQ7Z3D6 616 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 ARMC9Q7Z3E5 817 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 ZNF410Q86VK4 478 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 LCA5Q86VQ0 697 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 MEX3DQ86XN8 651 aaKnown RBP3.92□□□□□ -1.78
SNHG1-217ENST00000541578 KMT5CQ86Y97 462 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 SERPINA12Q8IW75 414 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 ODF3L1Q8IXM7 274 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 C1orf87Q8N0U7 546 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 URGCPQ8TCY9 931 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 ABTB1Q969K4 478 aaPredicted RBP3.92□□□□□ -1.78
SNHG1-217ENST00000541578 LINGO1Q96FE5 620 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 FAM71F1Q96KD3 344 aaPredicted RBP3.92□□□□□ -1.78
SNHG1-217ENST00000541578 NSMCE2Q96MF7 247 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 ZMYND12Q9H0C1 365 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 RAB6CQ9H0N0 254 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 ABCG4Q9H172 646 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 RAB9BQ9NP90 201 aa3.92□□□□□ -1.78
SNHG1-217ENST00000541578 PRMT8Q9NR22 394 aaPredicted RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms