RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	HHIP	Q96QV1	700 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	MRM3	Q9HC36	420 aa	Known RBP	5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ADPRHL2	Q9NX46	363 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	NEU3	Q9UQ49	428 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ORC6	Q9Y5N6	252 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	IGLV3-10	A0A075B6K4	115 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783		A0A096LPI6	279 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	IQCF5	A8MTL0	148 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PDZK1P1	A8MUH7	402 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	hCG_2039718	K7EN88	272 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	LDB2	O43679	373 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	OR1I1	O60431	355 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CYP7B1	O75881	506 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CER1	O95813	267 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	EGF	P01133	1207 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ATXN8OS	P0DMR3	200 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ITGB7	P26010	798 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	C21orf33	P30042	268 aa	Predicted RBP	5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	HK3	P52790	923 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	GABARAPL2	P60520	117 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	MRPS15	P82914	257 aa	Known RBP	5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	HMGCS1	Q01581	520 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	TRAF3	Q13114	568 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	TOP3A	Q13472	1001 aa	Predicted RBP	5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	COL19A1	Q14993	1142 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PTPRR	Q15256	657 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	FAM174B	Q3ZCQ3	159 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	LETMD1	Q6P1Q0	360 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	AFTPH	Q6ULP2	937 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	C1orf210	Q8IVY1	113 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SIDT2	Q8NBJ9	832 aa	Known RBP	5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PHF10	Q8WUB8	498 aa	Known RBP	5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	FUBP1	Q96AE4	644 aa	Known RBP	5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	AP2M1	Q96CW1	435 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	TXNDC15	Q96J42	360 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	GPR174	Q9BXC1	333 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CPEB1	Q9BZB8	566 aa	Known RBP	5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	FOXQ1	Q9C009	403 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ZDHHC5	Q9C0B5	715 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	TRIM39	Q9HCM9	518 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	NECTIN3	Q9NQS3	549 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PRDM6	Q9NQX0	595 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PLSCR3	Q9NRY6	295 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SPAST	Q9UBP0	616 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SNX6	Q9UNH7	406 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	N6AMT1	Q9Y5N5	214 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	GMPPB	Q9Y5P6	360 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PRR33	A8MZF0	331 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CHURC1-FNTB	B4DL54	471 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SLC31A1	O15431	190 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	GPR39	O43194	453 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	NIPSNAP2	O75323	286 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	MOSPD3	O75425	235 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	RASGRP1	O95267	797 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	VNN2	O95498	520 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PRR35	P0CG20	571 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	UROS	P10746	265 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SRC	P12931	536 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	HIST1H2AD	P20671	130 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CD72	P21854	359 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	GADD45A	P24522	165 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CXCR2	P25025	360 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SLC6A4	P31645	630 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SPAM1	P38567	509 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CLK3	P49761	638 aa	Known RBP	5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	RPL38	P63173	70 aa	Known RBP	5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	POM121L1P	Q3SYA9	428 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SPANXN4	Q5MJ08	99 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	MTFMT	Q96DP5	389 aa	Known RBP	5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	HIST1H2AH	Q96KK5	128 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	MCCC1	Q96RQ3	725 aa	Predicted RBP	5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	HIST1H2AJ	Q99878	128 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	H2AFJ	Q9BTM1	129 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	KAT8	Q9H7Z6	458 aa	Known RBP	5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ACOT13	Q9NPJ3	140 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SCN3B	Q9NY72	215 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	DKK3	Q9UBP4	350 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PCTP	Q9UKL6	214 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	TESMIN	Q9Y4I5	508 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SPO11	Q9Y5K1	396 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SNX8	Q9Y5X2	465 aa		5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	NUP214	P35658	2090 aa	Predicted RBP	5.48	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	FRMPD3	Q5JV73	1810 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SCN5A	Q14524	2016 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ELOVL7	A1L3X0	281 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PRAMEF26	H0Y7S4	382 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	RGS10	O43665	173 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	AIRE	O43918	545 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	KERA	O60938	352 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	VPS4B	O75351	444 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	VPS26A	O75436	327 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	HPR	P00739	348 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	DCN	P07585	359 aa	Known RBP	5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	MMP2	P08253	660 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ALPI	P09923	528 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CCDC159	P0C7I6	412 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	HSMCR30	P0CW71	290 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	HLA-F	P30511	346 aa		5.47	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	AVPR2	P30518	371 aa		5.47	□□□□□ -1.53

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms