RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 TRAPPC9Q96Q05 1148 aa10.15□□□□□ -0.78
ATL3-204ENST00000540699 ACTR8Q9H981 624 aa10.15□□□□□ -0.78
ATL3-204ENST00000540699 ASCL3Q9NQ33 180 aa10.15□□□□□ -0.78
ATL3-204ENST00000540699 FBXO8Q9NRD0 319 aa10.15□□□□□ -0.78
ATL3-204ENST00000540699 OCIAD1Q9NX40 245 aa10.15□□□□□ -0.78
ATL3-204ENST00000540699 AKAP7Q9P0M2 348 aaPredicted RBP10.15□□□□□ -0.78
ATL3-204ENST00000540699 KLHL3Q9UH77 587 aa10.15□□□□□ -0.78
ATL3-204ENST00000540699 TRIM33Q9UPN9 1127 aa10.15□□□□□ -0.78
ATL3-204ENST00000540699 PCDHGA3Q9Y5H0 932 aa10.15□□□□□ -0.78
ATL3-204ENST00000540699 FER1L5A0AVI2 2057 aa10.14□□□□□ -0.79
ATL3-204ENST00000540699 ATP6AP2A0A1C7CYW4 349 aa10.14□□□□□ -0.79
ATL3-204ENST00000540699 SERTM1A2A2V5 107 aa10.14□□□□□ -0.79
ATL3-204ENST00000540699 SLC9B1P1A6NJY1 282 aa10.14□□□□□ -0.79
ATL3-204ENST00000540699 CDRT15L2A8MXV6 281 aa10.14□□□□□ -0.79
ATL3-204ENST00000540699 ISM1B1AKI9 464 aa10.14□□□□□ -0.79
ATL3-204ENST00000540699 E7EQ34 232 aa10.14□□□□□ -0.79
ATL3-204ENST00000540699 NPIPB8E9PQR5 432 aa10.14□□□□□ -0.79
ATL3-204ENST00000540699 MANBAO00462 879 aa10.14□□□□□ -0.79
ATL3-204ENST00000540699 SLC22A2O15244 555 aa10.14□□□□□ -0.79
ATL3-204ENST00000540699 ATP6AP2O75787 350 aa10.14□□□□□ -0.79
ATL3-204ENST00000540699 RASSF9O75901 435 aa10.14□□□□□ -0.79
ATL3-204ENST00000540699 ALDOCP09972 364 aaKnown RBP10.14□□□□□ -0.79
ATL3-204ENST00000540699 CCL4P13236 92 aa10.14□□□□□ -0.79
ATL3-204ENST00000540699 ST6GAL1P15907 406 aa10.14□□□□□ -0.79
ATL3-204ENST00000540699 NPPBP16860 134 aa10.14□□□□□ -0.79
ATL3-204ENST00000540699 NCF2P19878 526 aaPredicted RBP10.14□□□□□ -0.79
ATL3-204ENST00000540699 CDH3P22223 829 aa10.14□□□□□ -0.79
ATL3-204ENST00000540699 CCND1P24385 295 aa10.14□□□□□ -0.79
ATL3-204ENST00000540699 HMOX2P30519 316 aa10.14□□□□□ -0.79
ATL3-204ENST00000540699 ADSLP30566 484 aaPredicted RBP10.14□□□□□ -0.79
ATL3-204ENST00000540699 MRPL19P49406 292 aaKnown RBP10.14□□□□□ -0.79
ATL3-204ENST00000540699 GABREP78334 506 aa10.14□□□□□ -0.79
ATL3-204ENST00000540699 HSD11B2P80365 405 aa10.14□□□□□ -0.79
ATL3-204ENST00000540699 KLF10Q13118 480 aa10.14□□□□□ -0.79
ATL3-204ENST00000540699 CHIT1Q13231 466 aa10.14□□□□□ -0.79
ATL3-204ENST00000540699 NAA25Q14CX7 972 aa10.14□□□□□ -0.79
ATL3-204ENST00000540699 ABRAXAS2Q15018 415 aa10.14□□□□□ -0.79
ATL3-204ENST00000540699 NXNQ6DKJ4 435 aa10.14□□□□□ -0.79
ATL3-204ENST00000540699 GRHL2Q6ISB3 625 aa10.14□□□□□ -0.79
ATL3-204ENST00000540699 LCTLQ6UWM7 567 aa10.14□□□□□ -0.79
ATL3-204ENST00000540699 SLCO4C1Q6ZQN7 724 aa10.14□□□□□ -0.79
ATL3-204ENST00000540699 TRIM46Q7Z4K8 759 aa10.14□□□□□ -0.79
ATL3-204ENST00000540699 DDIASQ8IXT1 998 aa10.14□□□□□ -0.79
ATL3-204ENST00000540699 OR2L3Q8NG85 312 aa10.14□□□□□ -0.79
ATL3-204ENST00000540699 SLC7A6OSQ96CW6 309 aaPredicted RBP10.14□□□□□ -0.79
ATL3-204ENST00000540699 MED8Q96G25 268 aa10.14□□□□□ -0.79
ATL3-204ENST00000540699 CATSPER2Q96P56 530 aa10.14□□□□□ -0.79
ATL3-204ENST00000540699 TUBB6Q9BUF5 446 aa10.14□□□□□ -0.79
ATL3-204ENST00000540699 DDA1Q9BW61 102 aa10.14□□□□□ -0.79
ATL3-204ENST00000540699 ACTR5Q9H9F9 607 aaPredicted RBP10.14□□□□□ -0.79
ATL3-204ENST00000540699 CCDC177Q9NQR7 707 aaPredicted RBP10.14□□□□□ -0.79
ATL3-204ENST00000540699 TXLNGQ9NUQ3 528 aa10.14□□□□□ -0.79
ATL3-204ENST00000540699 GIMAP2Q9UG22 337 aa10.14□□□□□ -0.79
ATL3-204ENST00000540699 ACSL6Q9UKU0 697 aa10.14□□□□□ -0.79
ATL3-204ENST00000540699 SH2B3Q9UQQ2 575 aa10.14□□□□□ -0.79
ATL3-204ENST00000540699 PCDHGA7Q9Y5G6 932 aa10.14□□□□□ -0.79
ATL3-204ENST00000540699 COPG1Q9Y678 874 aaKnown RBP10.14□□□□□ -0.79
ATL3-204ENST00000540699 EFCAB7A8K855 629 aa10.13□□□□□ -0.79
ATL3-204ENST00000540699 H0YIV9 168 aa10.13□□□□□ -0.79
ATL3-204ENST00000540699 CLGNO14967 610 aa10.13□□□□□ -0.79
ATL3-204ENST00000540699 LSM1O15116 133 aaKnown RBP10.13□□□□□ -0.79
ATL3-204ENST00000540699 UBDO15205 165 aa10.13□□□□□ -0.79
ATL3-204ENST00000540699 NVLO15381 856 aaKnown RBP10.13□□□□□ -0.79
ATL3-204ENST00000540699 TLX3O43711 291 aaPredicted RBP10.13□□□□□ -0.79
ATL3-204ENST00000540699 ATP5HO75947 161 aa10.13□□□□□ -0.79
ATL3-204ENST00000540699 JMJD7P0C870 316 aa10.13□□□□□ -0.79
ATL3-204ENST00000540699 PVRP15151 417 aa10.13□□□□□ -0.79
ATL3-204ENST00000540699 LBPP18428 481 aa10.13□□□□□ -0.79
ATL3-204ENST00000540699 ITIH1P19827 911 aa10.13□□□□□ -0.79
ATL3-204ENST00000540699 PIK3R1P27986 724 aa10.13□□□□□ -0.79
ATL3-204ENST00000540699 PSMB5P28074 263 aa10.13□□□□□ -0.79
ATL3-204ENST00000540699 PRDX6P30041 224 aa10.13□□□□□ -0.79
ATL3-204ENST00000540699 ARL1P40616 181 aaPredicted RBP10.13□□□□□ -0.79
ATL3-204ENST00000540699 HNF4AP41235 474 aa10.13□□□□□ -0.79
ATL3-204ENST00000540699 GABRA4P48169 554 aa10.13□□□□□ -0.79
ATL3-204ENST00000540699 SEPHS1P49903 392 aa10.13□□□□□ -0.79
ATL3-204ENST00000540699 RAB15P59190 212 aa10.13□□□□□ -0.79
ATL3-204ENST00000540699 IRX1P78414 480 aaPredicted RBP10.13□□□□□ -0.79
ATL3-204ENST00000540699 ABATP80404 500 aa10.13□□□□□ -0.79
ATL3-204ENST00000540699 IRF8Q02556 426 aa10.13□□□□□ -0.79
ATL3-204ENST00000540699 ZNF33BQ06732 778 aa10.13□□□□□ -0.79
ATL3-204ENST00000540699 C19orf57Q0VDD7 668 aa10.13□□□□□ -0.79
ATL3-204ENST00000540699 DOC2AQ14183 400 aa10.13□□□□□ -0.79
ATL3-204ENST00000540699 SQLEQ14534 574 aa10.13□□□□□ -0.79
ATL3-204ENST00000540699 ZIC1Q15915 447 aa10.13□□□□□ -0.79
ATL3-204ENST00000540699 CPSF6Q16630 551 aaKnown RBP eCLIP10.13□□□□□ -0.79
ATL3-204ENST00000540699 PRAMEF13Q5VWM6 474 aa10.13□□□□□ -0.79
ATL3-204ENST00000540699 KIAA1614Q5VZ46 1190 aa10.13□□□□□ -0.79
ATL3-204ENST00000540699 SCIMPQ6UWF3 145 aa10.13□□□□□ -0.79
ATL3-204ENST00000540699 SUSD1Q6UWL2 747 aa10.13□□□□□ -0.79
ATL3-204ENST00000540699 ASRGL1Q7L266 308 aa10.13□□□□□ -0.79
ATL3-204ENST00000540699 TRIM73Q86UV7 250 aa10.13□□□□□ -0.79
ATL3-204ENST00000540699 BPHLQ86WA6 291 aaPredicted RBP10.13□□□□□ -0.79
ATL3-204ENST00000540699 C2orf73Q8N5S3 287 aaPredicted RBP10.13□□□□□ -0.79
ATL3-204ENST00000540699 C19orf47Q8N9M1 422 aaKnown RBP10.13□□□□□ -0.79
ATL3-204ENST00000540699 WDR20Q8TBZ3 569 aa10.13□□□□□ -0.79
ATL3-204ENST00000540699 NEIL2Q969S2 332 aa10.13□□□□□ -0.79
ATL3-204ENST00000540699 ZUFSPQ96AP4 578 aa10.13□□□□□ -0.79
ATL3-204ENST00000540699 TUBGCP3Q96CW5 907 aa10.13□□□□□ -0.79
ATL3-204ENST00000540699 TCTN2Q96GX1 697 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms