RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 MCOLN1Q9GZU1 580 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 TRIT1Q9H3H1 467 aaKnown RBP11.08□□□□□ -0.64
C11orf54-214ENST00000540113 KRT84Q9NSB2 600 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 FAM120CQ9NX05 1096 aaKnown RBP11.08□□□□□ -0.64
C11orf54-214ENST00000540113 THUMPD1Q9NXG2 353 aaKnown RBP11.08□□□□□ -0.64
C11orf54-214ENST00000540113 BLOC1S6Q9UL45 172 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 TESMINQ9Y4I5 508 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 CHD9Q3L8U1 2897 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 SERTM1A2A2V5 107 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 LINC01553A4QN01 128 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 H0YIV9 168 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 H3BM21 787 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 NDUFS2O75306 463 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 SOD1P00441 154 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 VIPP01282 170 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 ITGAMP11215 1152 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 ADH5P11766 374 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 DNAJA1P31689 397 aaKnown RBP11.08□□□□□ -0.64
C11orf54-214ENST00000540113 RYKP34925 604 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 MASP1P48740 699 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 PRLHRP49683 370 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 ARHGDIAP52565 204 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 GABARAPL2P60520 117 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 RGNQ15493 299 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 ZNF658BQ4V348 819 aaPredicted RBP11.08□□□□□ -0.64
C11orf54-214ENST00000540113 PSRC1Q6PGN9 363 aaPredicted RBP11.08□□□□□ -0.64
C11orf54-214ENST00000540113 C16orf87Q6PH81 154 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 SLCO4C1Q6ZQN7 724 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 EIF3MQ7L2H7 374 aaKnown RBP11.08□□□□□ -0.64
C11orf54-214ENST00000540113 NPAS3Q8IXF0 933 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 TERB1Q8NA31 727 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 RAB2BQ8WUD1 216 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 CHTF18Q8WVB6 975 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 GLMNQ92990 594 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 TIFAQ96CG3 184 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 PLEKHA8Q96JA3 519 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 KCNC2Q96PR1 638 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 ALOXE3Q9BYJ1 711 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 TRIM39Q9HCM9 518 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 GPATCH2Q9NW75 528 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 TMEM9Q9P0T7 183 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 RPS6KA6Q9UK32 745 aa11.08□□□□□ -0.64
C11orf54-214ENST00000540113 PCYT1BQ9Y5K3 369 aaPredicted RBP11.08□□□□□ -0.64
C11orf54-214ENST00000540113 C1orf226A1L170 272 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 ZNF99A8MXY4 864 aaPredicted RBP11.07□□□□□ -0.64
C11orf54-214ENST00000540113 TMEM229AB2RXF0 380 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 C1orf105O95561 183 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 C6orf47O95873 294 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 MT-ND2P03891 347 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 SRPRAP08240 638 aaKnown RBP11.07□□□□□ -0.64
C11orf54-214ENST00000540113 ZNF8P17098 575 aaPredicted RBP11.07□□□□□ -0.64
C11orf54-214ENST00000540113 IL1RNP18510 177 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 FPR1P21462 350 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 RRM2P31350 389 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 VIPR2P41587 438 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 HBA1P69905 142 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 KCNJ10P78508 379 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 ATP1A4Q13733 1029 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 TUBA3CQ13748 450 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 SLBPQ14493 270 aaKnown RBP eCLIP11.07□□□□□ -0.64
C11orf54-214ENST00000540113 TBC1D25Q3MII6 688 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 GPR153Q6NV75 609 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 TSEN54Q7Z6J9 526 aaKnown RBP11.07□□□□□ -0.64
C11orf54-214ENST00000540113 SNX29P2Q8IUI4 249 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 ZNF540Q8NDQ6 660 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 OR56A3Q8NH54 315 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 NDNFQ8TB73 568 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 SPPL2AQ8TCT8 520 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 ZFP90Q8TF47 636 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 CNDP2Q96KP4 475 aaKnown RBP11.07□□□□□ -0.64
C11orf54-214ENST00000540113 ACAT2Q9BWD1 397 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 CHST8Q9H2A9 424 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 RAD21L1Q9H4I0 556 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 RUBCNLQ9H714 662 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 REEP1Q9H902 201 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 AMBNQ9NP70 447 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 RAD18Q9NS91 495 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 MRPS23Q9Y3D9 190 aaKnown RBP11.07□□□□□ -0.64
C11orf54-214ENST00000540113 PCDHGA10Q9Y5H3 936 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 PRRT4C9JH25 899 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 SLC9A3R1O14745 358 aaPredicted RBP11.07□□□□□ -0.64
C11orf54-214ENST00000540113 UGDHO60701 494 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 MMP20O60882 483 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 UGT2B11O75310 529 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 MYOGP15173 224 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 NPPBP16860 134 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 HNF4AP41235 474 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 SLC6A11P48066 632 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 VBP1P61758 197 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 CTF1Q16619 201 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 GAB4Q2WGN9 574 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 ZNF829Q3KNS6 432 aaPredicted RBP11.07□□□□□ -0.64
C11orf54-214ENST00000540113 IQCCQ4KMZ1 466 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 ARMCX6Q7L4S7 300 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 TRMT11Q7Z4G4 463 aaKnown RBP11.07□□□□□ -0.64
C11orf54-214ENST00000540113 CACUL1Q86Y37 369 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 PHOSPHO2Q8TCD6 241 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 HERVK_113Q902F9 699 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 ARRDC3Q96B67 414 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 LRIG1Q96JA1 1093 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms