RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 GTF2E2P29084 291 aaKnown RBP9.65□□□□□ -0.86
TRAF1-202ENST00000540010 RCVRNP35243 200 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 SLC15A1P46059 708 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 FOXA1P55317 472 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 CD83Q01151 205 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 EMX2Q04743 252 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 FOXM1Q08050 763 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 NFATC2Q13469 925 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 NDUFA5Q16718 116 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 IQCCQ4KMZ1 466 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 FRG2Q64ET8 278 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 BHLHB9Q6PI77 547 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 TMEM220Q6QAJ8 160 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 TPRG1Q6ZUI0 275 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 SPRED2Q7Z698 418 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 ZNF366Q8N895 744 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 RHEBL1Q8TAI7 183 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 SLC9A6Q92581 669 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 TRNT1Q96Q11 434 aaKnown RBP9.65□□□□□ -0.86
TRAF1-202ENST00000540010 FRG2BQ96QU4 278 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 RSPH9Q9H1X1 276 aaPredicted RBP9.65□□□□□ -0.86
TRAF1-202ENST00000540010 MEAF6Q9HAF1 191 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 TPT1P8Q9HAU6 139 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 MAT2BQ9NZL9 334 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 MAGED1Q9Y5V3 778 aaPredicted RBP9.65□□□□□ -0.86
TRAF1-202ENST00000540010 IRAK3Q9Y616 596 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 IQCMA0A1B0GVH7 501 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 ACOX3O15254 700 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 SEMA3DO95025 777 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 MAPK9P45984 424 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 TEAD4Q15561 434 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 PIWIL3Q7Z3Z3 882 aaKnown RBP9.65□□□□□ -0.86
TRAF1-202ENST00000540010 HS3ST5Q8IZT8 346 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 CXorf40AQ8TE69 158 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 LRCH3Q96II8 777 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 GMPR2Q9P2T1 348 aaKnown RBP9.65□□□□□ -0.86
TRAF1-202ENST00000540010 ERVK-18Q9QC07 812 aa9.65□□□□□ -0.86
TRAF1-202ENST00000540010 GSAPA4D1B5 854 aa9.65□□□□□ -0.87
TRAF1-202ENST00000540010 NPIPB15A6NHN6 443 aaPredicted RBP9.65□□□□□ -0.87
TRAF1-202ENST00000540010 NRG2O14511 850 aaPredicted RBP9.65□□□□□ -0.87
TRAF1-202ENST00000540010 SAGP10523 405 aaPredicted RBP9.65□□□□□ -0.87
TRAF1-202ENST00000540010 PSKH1P11801 424 aa9.65□□□□□ -0.87
TRAF1-202ENST00000540010 BPIP17213 487 aa9.65□□□□□ -0.87
TRAF1-202ENST00000540010 HOXB6P17509 224 aaKnown RBP9.65□□□□□ -0.87
TRAF1-202ENST00000540010 CEBPBP17676 345 aa9.65□□□□□ -0.87
TRAF1-202ENST00000540010 MYL9P24844 172 aa9.65□□□□□ -0.87
TRAF1-202ENST00000540010 TIE1P35590 1138 aa9.65□□□□□ -0.87
TRAF1-202ENST00000540010 CPOXP36551 454 aa9.65□□□□□ -0.87
TRAF1-202ENST00000540010 CSRP3P50461 194 aa9.65□□□□□ -0.87
TRAF1-202ENST00000540010 CLEC12AQ5QGZ9 265 aa9.65□□□□□ -0.87
TRAF1-202ENST00000540010 BLOC1S3Q6QNY0 202 aa9.65□□□□□ -0.87
TRAF1-202ENST00000540010 GDPD4Q6W3E5 623 aa9.65□□□□□ -0.87
TRAF1-202ENST00000540010 USP43Q70EL4 1123 aa9.65□□□□□ -0.87
TRAF1-202ENST00000540010 FAM217AQ8IXS0 508 aa9.65□□□□□ -0.87
TRAF1-202ENST00000540010 SLC15A4Q8N697 577 aa9.65□□□□□ -0.87
TRAF1-202ENST00000540010 CHST14Q8NCH0 376 aa9.65□□□□□ -0.87
TRAF1-202ENST00000540010 OR4K1Q8NGD4 311 aa9.65□□□□□ -0.87
TRAF1-202ENST00000540010 HSH2DQ96JZ2 352 aa9.65□□□□□ -0.87
TRAF1-202ENST00000540010 ZNF641Q96N77 438 aaPredicted RBP9.65□□□□□ -0.87
TRAF1-202ENST00000540010 ZFP3Q96NJ6 502 aa9.65□□□□□ -0.87
TRAF1-202ENST00000540010 YIPF4Q9BSR8 244 aa9.65□□□□□ -0.87
TRAF1-202ENST00000540010 FUNDC2Q9BWH2 189 aa9.65□□□□□ -0.87
TRAF1-202ENST00000540010 BOCQ9BWV1 1114 aa9.65□□□□□ -0.87
TRAF1-202ENST00000540010 GSTO2Q9H4Y5 243 aa9.65□□□□□ -0.87
TRAF1-202ENST00000540010 SLC32A1Q9H598 525 aa9.65□□□□□ -0.87
TRAF1-202ENST00000540010 IL26Q9NPH9 171 aa9.65□□□□□ -0.87
TRAF1-202ENST00000540010 TIGARQ9NQ88 270 aa9.65□□□□□ -0.87
TRAF1-202ENST00000540010 PCDH7O60245 1069 aa9.64□□□□□ -0.87
TRAF1-202ENST00000540010 CCNDBP1O95273 360 aa9.64□□□□□ -0.87
TRAF1-202ENST00000540010 RASAL1O95294 804 aa9.64□□□□□ -0.87
TRAF1-202ENST00000540010 HLA-DQA2P01906 255 aa9.64□□□□□ -0.87
TRAF1-202ENST00000540010 ANXA8P13928 327 aa9.64□□□□□ -0.87
TRAF1-202ENST00000540010 OXTRP30559 389 aa9.64□□□□□ -0.87
TRAF1-202ENST00000540010 RYKP34925 604 aa9.64□□□□□ -0.87
TRAF1-202ENST00000540010 DGKGP49619 791 aa9.64□□□□□ -0.87
TRAF1-202ENST00000540010 ABHD18Q0P651 414 aa9.64□□□□□ -0.87
TRAF1-202ENST00000540010 NFATC3Q12968 1075 aa9.64□□□□□ -0.87
TRAF1-202ENST00000540010 PCBP2Q15366 365 aaKnown RBP eCLIP9.64□□□□□ -0.87
TRAF1-202ENST00000540010 TSTQ16762 297 aaKnown RBP9.64□□□□□ -0.87
TRAF1-202ENST00000540010 CTSL3PQ5NE16 218 aa9.64□□□□□ -0.87
TRAF1-202ENST00000540010 ZNF544Q6NX49 715 aa9.64□□□□□ -0.87
TRAF1-202ENST00000540010 RGL4Q8IZJ4 473 aa9.64□□□□□ -0.87
TRAF1-202ENST00000540010 SCAIQ8N9R8 606 aa9.64□□□□□ -0.87
TRAF1-202ENST00000540010 HERVK_113Q902F9 699 aa9.64□□□□□ -0.87
TRAF1-202ENST00000540010 SLC30A3Q99726 388 aa9.64□□□□□ -0.87
TRAF1-202ENST00000540010 HEPHQ9BQS7 1158 aa9.64□□□□□ -0.87
TRAF1-202ENST00000540010 HCFC2Q9Y5Z7 792 aa9.64□□□□□ -0.87
TRAF1-202ENST00000540010 FZD6O60353 706 aa9.64□□□□□ -0.87
TRAF1-202ENST00000540010 NOS1APO75052 506 aaPredicted RBP9.64□□□□□ -0.87
TRAF1-202ENST00000540010 KLHL18O94889 574 aa9.64□□□□□ -0.87
TRAF1-202ENST00000540010 WASP42768 502 aa9.64□□□□□ -0.87
TRAF1-202ENST00000540010 HTR6P50406 440 aa9.64□□□□□ -0.87
TRAF1-202ENST00000540010 PHC1P78364 1004 aa9.64□□□□□ -0.87
TRAF1-202ENST00000540010 COL9A2Q14055 689 aaPredicted RBP9.64□□□□□ -0.87
TRAF1-202ENST00000540010 MYBPC3Q14896 1274 aa9.64□□□□□ -0.87
TRAF1-202ENST00000540010 SUZ12Q15022 739 aaKnown RBP9.64□□□□□ -0.87
TRAF1-202ENST00000540010 ATP6AP1Q15904 470 aa9.64□□□□□ -0.87
TRAF1-202ENST00000540010 PAGE3Q5JUK9 113 aa9.64□□□□□ -0.87
TRAF1-202ENST00000540010 MBOAT1Q6ZNC8 495 aa9.64□□□□□ -0.87
TRAF1-202ENST00000540010 MINDY1Q8N5J2 469 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms