RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 PXNP49023 591 aaPredicted RBP21.5■■□□□ 1.03
HOMER3-204ENST00000539827 AQP4P55087 323 aa21.5■■□□□ 1.03
HOMER3-204ENST00000539827 ZNF385BQ569K4 471 aa21.5■■□□□ 1.03
HOMER3-204ENST00000539827 CMPK2Q5EBM0 449 aa21.5■■□□□ 1.03
HOMER3-204ENST00000539827 DEPDC1Q5TB30 811 aa21.5■■□□□ 1.03
HOMER3-204ENST00000539827 KHDRBS2Q5VWX1 349 aaKnown RBP21.5■■□□□ 1.03
HOMER3-204ENST00000539827 HMBOX1Q6NT76 420 aa21.5■■□□□ 1.03
HOMER3-204ENST00000539827 ZNF621Q6ZSS3 439 aa21.5■■□□□ 1.03
HOMER3-204ENST00000539827 PUM2Q8TB72 1066 aaKnown RBP eCLIP21.5■■□□□ 1.03
HOMER3-204ENST00000539827 LCN9Q8WX39 176 aa21.5■■□□□ 1.03
HOMER3-204ENST00000539827 NSMCE2Q96MF7 247 aa21.5■■□□□ 1.03
HOMER3-204ENST00000539827 REEP4Q9H6H4 257 aa21.5■■□□□ 1.03
HOMER3-204ENST00000539827 TRNAU1APQ9NX07 287 aaKnown RBP21.5■■□□□ 1.03
HOMER3-204ENST00000539827 MAGEL2Q9UJ55 1249 aa21.5■■□□□ 1.03
HOMER3-204ENST00000539827 PCOLCE2Q9UKZ9 415 aa21.5■■□□□ 1.03
HOMER3-204ENST00000539827 MAPRE3Q9UPY8 281 aa21.5■■□□□ 1.03
HOMER3-204ENST00000539827 ERVK-11Q9UQG0 969 aa21.5■■□□□ 1.03
HOMER3-204ENST00000539827 MRPS17Q9Y2R5 130 aaKnown RBP21.5■■□□□ 1.03
HOMER3-204ENST00000539827 SLCO1B1Q9Y6L6 691 aa21.5■■□□□ 1.03
HOMER3-204ENST00000539827 V9GYQ6 96 aa21.5■■□□□ 1.03
HOMER3-204ENST00000539827 PLPP1O14494 284 aa21.49■■□□□ 1.03
HOMER3-204ENST00000539827 SERPIND1P05546 499 aa21.49■■□□□ 1.03
HOMER3-204ENST00000539827 GGT1P19440 569 aa21.49■■□□□ 1.03
HOMER3-204ENST00000539827 PSMA4P25789 261 aaKnown RBP21.49■■□□□ 1.03
HOMER3-204ENST00000539827 TAS2R50P59544 299 aa21.49■■□□□ 1.03
HOMER3-204ENST00000539827 DEFB119Q8N690 84 aa21.49■■□□□ 1.03
HOMER3-204ENST00000539827 COQ8BQ96D53 544 aa21.49■■□□□ 1.03
HOMER3-204ENST00000539827 PRPF18Q99633 342 aaKnown RBP21.49■■□□□ 1.03
HOMER3-204ENST00000539827 KAT8Q9H7Z6 458 aaKnown RBP21.49■■□□□ 1.03
HOMER3-204ENST00000539827 YY1AP1Q9H869 796 aa21.49■■□□□ 1.03
HOMER3-204ENST00000539827 ARMC1Q9NVT9 282 aa21.49■■□□□ 1.03
HOMER3-204ENST00000539827 ATP6V1HQ9UI12 483 aa21.49■■□□□ 1.03
HOMER3-204ENST00000539827 LRP4O75096 1905 aa21.49■■□□□ 1.03
HOMER3-204ENST00000539827 IGHV1OR15-9A0A0B4J2B8 117 aa21.48■■□□□ 1.03
HOMER3-204ENST00000539827 ARHGAP10A1A4S6 786 aa21.48■■□□□ 1.03
HOMER3-204ENST00000539827 ISM1B1AKI9 464 aa21.48■■□□□ 1.03
HOMER3-204ENST00000539827 PEX1O43933 1283 aa21.48■■□□□ 1.03
HOMER3-204ENST00000539827 KDM1AO60341 852 aa21.48■■□□□ 1.03
HOMER3-204ENST00000539827 STATHP02808 62 aa21.48■■□□□ 1.03
HOMER3-204ENST00000539827 THEGLP0DJG4 465 aa21.48■■□□□ 1.03
HOMER3-204ENST00000539827 IL10P22301 178 aa21.48■■□□□ 1.03
HOMER3-204ENST00000539827 PRRT3Q5FWE3 981 aa21.48■■□□□ 1.03
HOMER3-204ENST00000539827 AMIGO1Q86WK6 493 aa21.48■■□□□ 1.03
HOMER3-204ENST00000539827 FBXL6Q8N531 539 aa21.48■■□□□ 1.03
HOMER3-204ENST00000539827 ZNF548Q8NEK5 533 aaPredicted RBP21.48■■□□□ 1.03
HOMER3-204ENST00000539827 FIG4Q92562 907 aa21.48■■□□□ 1.03
HOMER3-204ENST00000539827 PPWD1Q96BP3 646 aaKnown RBP21.48■■□□□ 1.03
HOMER3-204ENST00000539827 FAM120BQ96EK7 910 aaKnown RBP21.48■■□□□ 1.03
HOMER3-204ENST00000539827 GUCD1Q96NT3 240 aa21.48■■□□□ 1.03
HOMER3-204ENST00000539827 AHSPQ9NZD4 102 aa21.48■■□□□ 1.03
HOMER3-204ENST00000539827 DMTF1Q9Y222 760 aa21.48■■□□□ 1.03
HOMER3-204ENST00000539827 KLHL20Q9Y2M5 609 aa21.48■■□□□ 1.03
HOMER3-204ENST00000539827 PLXND1Q9Y4D7 1925 aa21.48■■□□□ 1.03
HOMER3-204ENST00000539827 PRUNE2Q8WUY3 3088 aa21.48■■□□□ 1.03
HOMER3-204ENST00000539827 HEATR5BQ9P2D3 2071 aa21.48■■□□□ 1.03
HOMER3-204ENST00000539827 A6NCN8 305 aa21.48■■□□□ 1.03
HOMER3-204ENST00000539827 TOR1BO14657 336 aa21.48■■□□□ 1.03
HOMER3-204ENST00000539827 NDUFS1P28331 727 aa21.48■■□□□ 1.03
HOMER3-204ENST00000539827 TPP2P29144 1249 aaPredicted RBP21.48■■□□□ 1.03
HOMER3-204ENST00000539827 EIF2B5Q13144 721 aaKnown RBP21.48■■□□□ 1.03
HOMER3-204ENST00000539827 SLC14A1Q13336 389 aa21.48■■□□□ 1.03
HOMER3-204ENST00000539827 FAM71E1Q6IPT2 247 aa21.48■■□□□ 1.03
HOMER3-204ENST00000539827 CAMKMTQ7Z624 323 aa21.48■■□□□ 1.03
HOMER3-204ENST00000539827 TMEM126BQ8IUX1 230 aa21.48■■□□□ 1.03
HOMER3-204ENST00000539827 GOLM1Q8NBJ4 401 aa21.48■■□□□ 1.03
HOMER3-204ENST00000539827 OR2L3Q8NG85 312 aa21.48■■□□□ 1.03
HOMER3-204ENST00000539827 PITHD1Q9GZP4 211 aaPredicted RBP21.48■■□□□ 1.03
HOMER3-204ENST00000539827 MYNNQ9NPC7 610 aa21.48■■□□□ 1.03
HOMER3-204ENST00000539827 AP3M1Q9Y2T2 418 aa21.48■■□□□ 1.03
HOMER3-204ENST00000539827 FANCMQ8IYD8 2048 aa21.48■■□□□ 1.03
HOMER3-204ENST00000539827 ELOVL7A1L3X0 281 aa21.47■■□□□ 1.03
HOMER3-204ENST00000539827 TPST1O60507 370 aa21.47■■□□□ 1.03
HOMER3-204ENST00000539827 ANXA6P08133 673 aa21.47■■□□□ 1.03
HOMER3-204ENST00000539827 IL3P08700 152 aa21.47■■□□□ 1.03
HOMER3-204ENST00000539827 CHRM5P08912 532 aaPredicted RBP21.47■■□□□ 1.03
HOMER3-204ENST00000539827 F3P13726 295 aa21.47■■□□□ 1.03
HOMER3-204ENST00000539827 SHMT2P34897 504 aa21.47■■□□□ 1.03
HOMER3-204ENST00000539827 GZMMP51124 257 aa21.47■■□□□ 1.03
HOMER3-204ENST00000539827 HNRNPFP52597 415 aaKnown RBP21.47■■□□□ 1.03
HOMER3-204ENST00000539827 ILF3Q12906 894 aaKnown RBP eCLIP21.47■■□□□ 1.03
HOMER3-204ENST00000539827 CCNYL2Q5T2Q4 361 aa21.47■■□□□ 1.03
HOMER3-204ENST00000539827 IRAK1BP1Q5VVH5 260 aa21.47■■□□□ 1.03
HOMER3-204ENST00000539827 CALHM3Q86XJ0 350 aa21.47■■□□□ 1.03
HOMER3-204ENST00000539827 MICU2Q8IYU8 434 aa21.47■■□□□ 1.03
HOMER3-204ENST00000539827 ADCY4Q8NFM4 1077 aa21.47■■□□□ 1.03
HOMER3-204ENST00000539827 DPH7Q9BTV6 452 aa21.47■■□□□ 1.03
HOMER3-204ENST00000539827 SPASTQ9UBP0 616 aa21.47■■□□□ 1.03
HOMER3-204ENST00000539827 KLF15Q9UIH9 416 aa21.47■■□□□ 1.03
HOMER3-204ENST00000539827 ANAPC2Q9UJX6 822 aa21.47■■□□□ 1.03
HOMER3-204ENST00000539827 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.47■■□□□ 1.03
HOMER3-204ENST00000539827 AK5Q9Y6K8 562 aa21.47■■□□□ 1.03
HOMER3-204ENST00000539827 DGKBQ9Y6T7 804 aa21.47■■□□□ 1.03
HOMER3-204ENST00000539827 A0A1W2PPC4 97 aa21.47■■□□□ 1.03
HOMER3-204ENST00000539827 HAT1O14929 419 aa21.47■■□□□ 1.03
HOMER3-204ENST00000539827 GMNNO75496 209 aa21.47■■□□□ 1.03
HOMER3-204ENST00000539827 GPIP06744 558 aa21.47■■□□□ 1.03
HOMER3-204ENST00000539827 CELA2BP08218 269 aaPredicted RBP21.47■■□□□ 1.03
HOMER3-204ENST00000539827 FURINP09958 794 aa21.47■■□□□ 1.03
HOMER3-204ENST00000539827 HOXB3P14651 431 aaPredicted RBP21.47■■□□□ 1.03
HOMER3-204ENST00000539827 ENGP17813 658 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms