RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 PTHP01270 115 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 ALOX12P18054 663 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 IDSP22304 550 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 DEFA1P59665 94 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 DEFA3P59666 94 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 RAE1P78406 368 aaKnown RBP9.31□□□□□ -0.92
CDH13-204ENST00000539548 SEMG2Q02383 582 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 PTSQ03393 145 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 LRRC74AQ0VAA2 488 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 CRHR2Q13324 411 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 SF3B4Q15427 424 aaKnown RBP eCLIP9.31□□□□□ -0.92
CDH13-204ENST00000539548 TAF12Q16514 161 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 CARTPTQ16568 116 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 DGKKQ5KSL6 1271 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.31□□□□□ -0.92
CDH13-204ENST00000539548 SLX4IPQ5VYV7 408 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 ZDHHC20Q5W0Z9 365 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 LRRC66Q68CR7 880 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 Q6ZNB5 142 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 CCDC190Q86UF4 302 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 HEATR4Q86WZ0 1026 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 NPAS3Q8IXF0 933 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 IL17RDQ8NFM7 739 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 SPPL2AQ8TCT8 520 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 ADAMTS19Q8TE59 1207 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 PIK3R3Q92569 461 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 MAL2Q969L2 176 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 VOPP1Q96AW1 172 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 ZNF486Q96H40 463 aaPredicted RBP9.31□□□□□ -0.92
CDH13-204ENST00000539548 CENPOQ9BU64 300 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 CDCA4Q9BXL8 241 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 ATG10Q9H0Y0 220 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 SIAEQ9HAT2 523 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 BRF2Q9HAW0 419 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 PRDM8Q9NQV8 689 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 RLIMQ9NVW2 624 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 EHD3Q9NZN3 535 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 TMPRSS11EQ9UL52 423 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 VPS4AQ9UN37 437 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 RBMX2Q9Y388 322 aaKnown RBP9.31□□□□□ -0.92
CDH13-204ENST00000539548 ZNF451Q9Y4E5 1061 aa9.31□□□□□ -0.92
CDH13-204ENST00000539548 H0YIV9 168 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 KMOO15229 486 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 EFEMP2O95967 443 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 ANXA4P09525 319 aaPredicted RBP9.3□□□□□ -0.92
CDH13-204ENST00000539548 HLA-EP13747 358 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 ATP1B2P14415 290 aaPredicted RBP9.3□□□□□ -0.92
CDH13-204ENST00000539548 AQP1P29972 269 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 SOX6P35712 828 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 HNF4AP41235 474 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 PIK3CBP42338 1070 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 IDH2P48735 452 aaKnown RBP9.3□□□□□ -0.92
CDH13-204ENST00000539548 NUDT6P53370 316 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 IFITM2Q01629 132 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 PCDH1Q08174 1060 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 PLD1Q13393 1074 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 DOC2AQ14183 400 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 IFI44LQ53G44 452 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 SOWAHCQ53LP3 525 aaPredicted RBP9.3□□□□□ -0.92
CDH13-204ENST00000539548 XKR6Q5GH73 641 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 RFLNAQ6ZTI6 216 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 ZNF367Q7RTV3 350 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 SAPCD2Q86UD0 394 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 NLRP8Q86W28 1048 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 THOC6Q86W42 341 aaKnown RBP9.3□□□□□ -0.92
CDH13-204ENST00000539548 FAM217AQ8IXS0 508 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 OR2AP1Q8NGE2 309 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 GOT1L1Q8NHS2 421 aaPredicted RBP9.3□□□□□ -0.92
CDH13-204ENST00000539548 CDC26Q8NHZ8 85 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 ATL1Q8WXF7 558 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 MCCC1Q96RQ3 725 aaPredicted RBP9.3□□□□□ -0.92
CDH13-204ENST00000539548 MTERF1Q99551 399 aaKnown RBP9.3□□□□□ -0.92
CDH13-204ENST00000539548 CLSTN3Q9BQT9 956 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 CHCHD6Q9BRQ6 235 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 YIPF2Q9BWQ6 316 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 BBS2Q9BXC9 721 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 ARHGAP39Q9C0H5 1083 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 RNF167Q9H6Y7 350 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 THSD1Q9NS62 852 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 ABCB8Q9NUT2 735 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 ZNF282Q9UDV7 671 aaPredicted RBP9.3□□□□□ -0.92
CDH13-204ENST00000539548 LRFN2Q9ULH4 789 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 SH3D21A4FU49 640 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 EFCAB10A6NFE3 127 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 PSMD11O00231 422 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 RNASET2O00584 256 aaKnown RBP9.3□□□□□ -0.92
CDH13-204ENST00000539548 PCDH7O60245 1069 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 TNFRSF21O75509 655 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 ABLIM3O94929 683 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 APOA1P02647 267 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 ITGA2P17301 1181 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 HMGA2P52926 109 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 MVDP53602 400 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 ZXDBP98169 803 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 GAB1Q13480 694 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 SF1Q15637 639 aaKnown RBP9.3□□□□□ -0.92
CDH13-204ENST00000539548 EXOC3L2Q2M3D2 409 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 SPANXN2Q5MJ10 180 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 GRHL2Q6ISB3 625 aa9.3□□□□□ -0.92
CDH13-204ENST00000539548 USP45Q70EL2 814 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms