RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 EMBQ6PCB8 327 aa3.51□□□□□ -1.85
CCDC7-209ENST00000539197 TSPAN14Q8NG11 270 aa3.51□□□□□ -1.85
CCDC7-209ENST00000539197 OR4C15Q8NGM1 316 aa3.51□□□□□ -1.85
CCDC7-209ENST00000539197 JAKMIP2Q96AA8 810 aa3.51□□□□□ -1.85
CCDC7-209ENST00000539197 EVI5LQ96CN4 794 aa3.51□□□□□ -1.85
CCDC7-209ENST00000539197 BARD1Q99728 777 aaKnown RBP3.51□□□□□ -1.85
CCDC7-209ENST00000539197 SDCBP2Q9H190 292 aa3.51□□□□□ -1.85
CCDC7-209ENST00000539197 DNAJC4Q9NNZ3 241 aa3.51□□□□□ -1.85
CCDC7-209ENST00000539197 GIMAP4Q9NUV9 329 aa3.51□□□□□ -1.85
CCDC7-209ENST00000539197 ADAM22Q9P0K1 906 aa3.51□□□□□ -1.85
CCDC7-209ENST00000539197 IL17CQ9P0M4 197 aa3.51□□□□□ -1.85
CCDC7-209ENST00000539197 IL36AQ9UHA7 158 aa3.51□□□□□ -1.85
CCDC7-209ENST00000539197 VPS28Q9UK41 221 aa3.51□□□□□ -1.85
CCDC7-209ENST00000539197 ZNF346Q9UL40 294 aaKnown RBP3.51□□□□□ -1.85
CCDC7-209ENST00000539197 RNF123Q5XPI4 1314 aa3.5□□□□□ -1.85
CCDC7-209ENST00000539197 ANKRD18BA2A2Z9 1011 aa3.5□□□□□ -1.85
CCDC7-209ENST00000539197 QDPRP09417 244 aa3.5□□□□□ -1.85
CCDC7-209ENST00000539197 F3P13726 295 aa3.5□□□□□ -1.85
CCDC7-209ENST00000539197 ALOX12P18054 663 aa3.5□□□□□ -1.85
CCDC7-209ENST00000539197 HOXD13P35453 343 aa3.5□□□□□ -1.85
CCDC7-209ENST00000539197 ASCL1P50553 236 aa3.5□□□□□ -1.85
CCDC7-209ENST00000539197 UBXN2AP68543 259 aa3.5□□□□□ -1.85
CCDC7-209ENST00000539197 BAATQ14032 418 aaPredicted RBP3.5□□□□□ -1.85
CCDC7-209ENST00000539197 CYLC2Q14093 348 aaPredicted RBP3.5□□□□□ -1.85
CCDC7-209ENST00000539197 PRSS55Q6UWB4 352 aaPredicted RBP3.5□□□□□ -1.85
CCDC7-209ENST00000539197 CPEB2Q7Z5Q1 589 aaKnown RBP3.5□□□□□ -1.85
CCDC7-209ENST00000539197 FLVCR1-AS1Q8TAF5 88 aa3.5□□□□□ -1.85
CCDC7-209ENST00000539197 PROX1Q92786 737 aa3.5□□□□□ -1.85
CCDC7-209ENST00000539197 NABP1Q96AH0 204 aa3.5□□□□□ -1.85
CCDC7-209ENST00000539197 NDNQ99608 321 aa3.5□□□□□ -1.85
CCDC7-209ENST00000539197 CPNE1Q99829 537 aa3.5□□□□□ -1.85
CCDC7-209ENST00000539197 GHITMQ9H3K2 345 aa3.5□□□□□ -1.85
CCDC7-209ENST00000539197 TBC1D22BQ9NU19 505 aa3.5□□□□□ -1.85
CCDC7-209ENST00000539197 OLAHQ9NV23 265 aa3.5□□□□□ -1.85
CCDC7-209ENST00000539197 SPATA31D1Q6ZQQ2 1576 aa3.5□□□□□ -1.85
CCDC7-209ENST00000539197 TRAV24A0A0B4J272 114 aa3.49□□□□□ -1.85
CCDC7-209ENST00000539197 TNFSF12O43508 249 aa3.49□□□□□ -1.85
CCDC7-209ENST00000539197 SEMA4FO95754 770 aa3.49□□□□□ -1.85
CCDC7-209ENST00000539197 LRRC49Q8IUZ0 686 aa3.49□□□□□ -1.85
CCDC7-209ENST00000539197 OR5M9Q8NGP3 310 aa3.49□□□□□ -1.85
CCDC7-209ENST00000539197 NXPE2Q96DL1 559 aa3.49□□□□□ -1.85
CCDC7-209ENST00000539197 CNOT10Q9H9A5 744 aaKnown RBP3.49□□□□□ -1.85
CCDC7-209ENST00000539197 CUTCQ9NTM9 273 aa3.49□□□□□ -1.85
CCDC7-209ENST00000539197 BLOC1S4Q9NUP1 217 aa3.49□□□□□ -1.85
CCDC7-209ENST00000539197 TXNDC16Q9P2K2 825 aa3.49□□□□□ -1.85
CCDC7-209ENST00000539197 ADD3Q9UEY8 706 aaKnown RBP3.49□□□□□ -1.85
CCDC7-209ENST00000539197 PILRBQ9UKJ0 227 aa3.49□□□□□ -1.85
CCDC7-209ENST00000539197 FER1L5A0AVI2 2057 aa3.48□□□□□ -1.85
CCDC7-209ENST00000539197 IL16Q14005 1332 aa3.48□□□□□ -1.85
CCDC7-209ENST00000539197 NKX6-3A6NJ46 265 aa3.48□□□□□ -1.85
CCDC7-209ENST00000539197 CSH1P0DML2 217 aa3.48□□□□□ -1.85
CCDC7-209ENST00000539197 CSH2P0DML3 217 aa3.48□□□□□ -1.85
CCDC7-209ENST00000539197 DUTP33316 252 aaKnown RBP3.48□□□□□ -1.85
CCDC7-209ENST00000539197 EPS8Q12929 822 aa3.48□□□□□ -1.85
CCDC7-209ENST00000539197 VWC2Q2TAL6 325 aa3.48□□□□□ -1.85
CCDC7-209ENST00000539197 TIMM50Q3ZCQ8 353 aa3.48□□□□□ -1.85
CCDC7-209ENST00000539197 NHLRC3Q5JS37 347 aa3.48□□□□□ -1.85
CCDC7-209ENST00000539197 NHLRC1Q6VVB1 395 aa3.48□□□□□ -1.85
CCDC7-209ENST00000539197 ANKRD13CQ8N6S4 541 aa3.48□□□□□ -1.85
CCDC7-209ENST00000539197 PRPF31Q8WWY3 499 aaKnown RBP3.48□□□□□ -1.85
CCDC7-209ENST00000539197 CASP10Q92851 521 aa3.48□□□□□ -1.85
CCDC7-209ENST00000539197 RANBP9Q96S59 729 aa3.48□□□□□ -1.85
CCDC7-209ENST00000539197 FEVQ99581 238 aa3.48□□□□□ -1.85
CCDC7-209ENST00000539197 ANKZF1Q9H8Y5 726 aa3.48□□□□□ -1.85
CCDC7-209ENST00000539197 Q9UF83 564 aa3.48□□□□□ -1.85
CCDC7-209ENST00000539197 FBXL4Q9UKA2 621 aa3.48□□□□□ -1.85
CCDC7-209ENST00000539197 TMEM5Q9Y2B1 443 aa3.48□□□□□ -1.85
CCDC7-209ENST00000539197 SALL1Q9NSC2 1324 aa3.47□□□□□ -1.85
CCDC7-209ENST00000539197 hCG_1807616A0A1W2PRN6 198 aa3.47□□□□□ -1.85
CCDC7-209ENST00000539197 SERPING1P05155 500 aa3.47□□□□□ -1.85
CCDC7-209ENST00000539197 UMPSP11172 480 aa3.47□□□□□ -1.85
CCDC7-209ENST00000539197 GIFP27352 417 aa3.47□□□□□ -1.85
CCDC7-209ENST00000539197 SFTPDP35247 375 aa3.47□□□□□ -1.85
CCDC7-209ENST00000539197 CUL4AQ13619 759 aa3.47□□□□□ -1.85
CCDC7-209ENST00000539197 FAM205BPQ63HN1 556 aa3.47□□□□□ -1.85
CCDC7-209ENST00000539197 C5orf24Q7Z6I8 188 aa3.47□□□□□ -1.85
CCDC7-209ENST00000539197 CCDC60Q8IWA6 550 aaPredicted RBP3.47□□□□□ -1.85
CCDC7-209ENST00000539197 TEKT4Q8WW24 435 aa3.47□□□□□ -1.85
CCDC7-209ENST00000539197 ESAMQ96AP7 390 aa3.47□□□□□ -1.85
CCDC7-209ENST00000539197 OTUB1Q96FW1 271 aaPredicted RBP3.47□□□□□ -1.85
CCDC7-209ENST00000539197 RSRC1Q96IZ7 334 aaKnown RBP3.47□□□□□ -1.85
CCDC7-209ENST00000539197 ABHD1Q96SE0 405 aa3.47□□□□□ -1.85
CCDC7-209ENST00000539197 IL12RB2Q99665 862 aa3.47□□□□□ -1.85
CCDC7-209ENST00000539197 ACTL8Q9H568 366 aa3.47□□□□□ -1.85
CCDC7-209ENST00000539197 NOL11Q9H8H0 719 aaKnown RBP3.47□□□□□ -1.85
CCDC7-209ENST00000539197 TBC1D29Q9UFV1 150 aa3.47□□□□□ -1.85
CCDC7-209ENST00000539197 INPP4BO15327 924 aa3.46□□□□□ -1.86
CCDC7-209ENST00000539197 ZNF253O75346 499 aa3.46□□□□□ -1.86
CCDC7-209ENST00000539197 SLC1A4P43007 532 aa3.46□□□□□ -1.86
CCDC7-209ENST00000539197 RGRP47804 291 aa3.46□□□□□ -1.86
CCDC7-209ENST00000539197 KNOP1Q1ED39 458 aaKnown RBP3.46□□□□□ -1.86
CCDC7-209ENST00000539197 TTC30BQ8N4P2 665 aa3.46□□□□□ -1.86
CCDC7-209ENST00000539197 SLC4A11Q8NBS3 891 aa3.46□□□□□ -1.86
CCDC7-209ENST00000539197 NSUN4Q96CB9 384 aaKnown RBP3.46□□□□□ -1.86
CCDC7-209ENST00000539197 PDE7BQ9NP56 450 aa3.46□□□□□ -1.86
CCDC7-209ENST00000539197 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.46□□□□□ -1.863e-7■■■■■ 29.4
CCDC7-209ENST00000539197 MRPL15Q9P015 296 aaKnown RBP3.46□□□□□ -1.86
CCDC7-209ENST00000539197 DHRS4-AS1Q9P1J3 65 aa3.46□□□□□ -1.86
CCDC7-209ENST00000539197 POLLQ9UGP5 575 aa3.46□□□□□ -1.86
CCDC7-209ENST00000539197 PPIEQ9UNP9 301 aaKnown RBP3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms