RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 GNAZP19086 355 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 GJB2P29033 226 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 AHRP35869 848 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 SSR1P43307 286 aaKnown RBP0.96□□□□□ -2.26
HIF1A-204ENST00000539097 PPIAP62937 165 aaKnown RBP0.96□□□□□ -2.26
HIF1A-204ENST00000539097 HTD2P86397 168 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 MYL7Q01449 175 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 TNFRSF17Q02223 184 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 FOLH1Q04609 750 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 SLC34A1Q06495 639 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 HNRNPA0Q13151 305 aaKnown RBP0.96□□□□□ -2.26
HIF1A-204ENST00000539097 RBBP7Q16576 425 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 PGGHGQ32M88 737 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 MDH1BQ5I0G3 518 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 TMUB2Q71RG4 321 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 TUBA1AQ71U36 451 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 MARK2Q7KZI7 788 aaKnown RBP0.96□□□□□ -2.26
HIF1A-204ENST00000539097 IQCHQ86VS3 1027 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 PLD3Q8IV08 490 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 MFSD6LQ8IWD5 586 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 PEX5LQ8IYB4 626 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP0.96□□□□□ -2.26
HIF1A-204ENST00000539097 KDM8Q8N371 416 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 FGFRL1Q8N441 504 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 CLEC1AQ8NC01 280 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 GMCL1P1Q8NEA9 526 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 NEK11Q8NG66 645 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 TRAF3IP1Q8TDR0 691 aaPredicted RBP0.96□□□□□ -2.26
HIF1A-204ENST00000539097 CASP10Q92851 521 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 ABTB1Q969K4 478 aaPredicted RBP0.96□□□□□ -2.26
HIF1A-204ENST00000539097 SPSB1Q96BD6 273 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 PGM2Q96G03 612 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 C5orf30Q96GV9 206 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 CABS1Q96KC9 395 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 C3orf30Q96M34 536 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 ZNF778Q96MU6 729 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 TUBA1CQ9BQE3 449 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 FERMT1Q9BQL6 677 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 NACAP1Q9BZK3 213 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 HOXD1Q9GZZ0 328 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 CXXC4Q9H2H0 198 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 GAREM1Q9H706 876 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 RPF1Q9H9Y2 349 aaKnown RBP0.96□□□□□ -2.26
HIF1A-204ENST00000539097 PPANQ9NQ55 473 aaKnown RBP0.96□□□□□ -2.26
HIF1A-204ENST00000539097 CNGB3Q9NQW8 809 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 ANO10Q9NW15 660 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 MIOSQ9NXC5 875 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 AIPL1Q9NZN9 384 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 TRPC4Q9UBN4 977 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 TBK1Q9UHD2 729 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 DAPK2Q9UIK4 370 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 WDR83OSQ9Y284 106 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 PADI2Q9Y2J8 665 aa0.96□□□□□ -2.26
HIF1A-204ENST00000539097 MYH14Q7Z406 1995 aaKnown RBP0.95□□□□□ -2.26
HIF1A-204ENST00000539097 DNAH7Q8WXX0 4024 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 MSGN1A6NI15 193 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 CCDC69A6NI79 296 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 F8WDY8 70 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 SNX3O60493 162 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 CLPTM1O96005 669 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 HIST1H2AGP0C0S8 130 aaPredicted RBP0.95□□□□□ -2.26
HIF1A-204ENST00000539097 FGF3P11487 239 aaPredicted RBP0.95□□□□□ -2.26
HIF1A-204ENST00000539097 RPA1P27694 616 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 STIP1P31948 543 aaKnown RBP0.95□□□□□ -2.26
HIF1A-204ENST00000539097 TIMP3P35625 211 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 ARCN1P48444 511 aaKnown RBP0.95□□□□□ -2.26
HIF1A-204ENST00000539097 IL1RL1Q01638 556 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 RELQ04864 619 aaPredicted RBP0.95□□□□□ -2.26
HIF1A-204ENST00000539097 PPATQ06203 517 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 RASGEF1BQ0VAM2 473 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 CETN1Q12798 172 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 ITGA9Q13797 1035 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 EPC2Q52LR7 807 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 WASHC2DQ5SRD0 308 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 CYB5D1Q6P9G0 228 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 TMEM270Q6UE05 265 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 CD300LGQ6UXG3 332 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 B3GLCTQ6Y288 498 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 SIGLEC15Q6ZMC9 328 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 GDPD3Q7L5L3 318 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 GPR180Q86V85 440 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 TMEM173Q86WV6 379 aaPredicted RBP0.95□□□□□ -2.26
HIF1A-204ENST00000539097 HIST2H2ABQ8IUE6 130 aaPredicted RBP0.95□□□□□ -2.26
HIF1A-204ENST00000539097 NUP93Q8N1F7 819 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 GBGT1Q8N5D6 347 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 OR5AP2Q8NGF4 316 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 SPPL2AQ8TCT8 520 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 WASF1Q92558 559 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 ARHGAP45Q92619 1136 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 HIST1H2ACQ93077 130 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 RTP4Q96DX8 246 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 PRAM1Q96QH2 718 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 PANX3Q96QZ0 392 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 PKP2Q99959 881 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 DDX50Q9BQ39 737 aaKnown RBP0.95□□□□□ -2.26
HIF1A-204ENST00000539097 THUMPD3Q9BV44 507 aaKnown RBP0.95□□□□□ -2.26
HIF1A-204ENST00000539097 FNDC11Q9BVV2 318 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 MMADHCQ9H3L0 296 aaPredicted RBP0.95□□□□□ -2.26
HIF1A-204ENST00000539097 TRPC7Q9HCX4 862 aa0.95□□□□□ -2.26
HIF1A-204ENST00000539097 SCRT2Q9NQ03 307 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms