RNA–Protein interactions for RNA: ENST00000537796.2

NECAP1-203, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,418 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-203ENST00000537796 ZNF547Q8IVP9 402 aa7.17□□□□□ -1.26
NECAP1-203ENST00000537796 MRPL43Q8N983 215 aaKnown RBP7.17□□□□□ -1.26
NECAP1-203ENST00000537796 UTP15Q8TED0 518 aaKnown RBP7.17□□□□□ -1.26
NECAP1-203ENST00000537796 RAB8BQ92930 207 aa7.17□□□□□ -1.26
NECAP1-203ENST00000537796 TESCQ96BS2 214 aa7.17□□□□□ -1.26
NECAP1-203ENST00000537796 CCM2Q9BSQ5 444 aa7.17□□□□□ -1.26
NECAP1-203ENST00000537796 MIR1-1HGQ9H1L0 117 aa7.17□□□□□ -1.26
NECAP1-203ENST00000537796 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.17□□□□□ -1.26
NECAP1-203ENST00000537796 SLC23A2Q9UGH3 650 aa7.17□□□□□ -1.26
NECAP1-203ENST00000537796 ZNF510Q9Y2H8 683 aa7.17□□□□□ -1.26
NECAP1-203ENST00000537796 MRPS23Q9Y3D9 190 aaKnown RBP7.17□□□□□ -1.26
NECAP1-203ENST00000537796 WDR87Q6ZQQ6 2873 aa7.17□□□□□ -1.26
NECAP1-203ENST00000537796 ANKRD33BA6NCL7 494 aa7.17□□□□□ -1.26
NECAP1-203ENST00000537796 M0QX08 132 aa7.17□□□□□ -1.26
NECAP1-203ENST00000537796 NDUFS2O75306 463 aa7.17□□□□□ -1.26
NECAP1-203ENST00000537796 PSIP1O75475 530 aaKnown RBP7.17□□□□□ -1.26
NECAP1-203ENST00000537796 POP7O75817 140 aaKnown RBP7.17□□□□□ -1.26
NECAP1-203ENST00000537796 CPNE6O95741 557 aa7.17□□□□□ -1.26
NECAP1-203ENST00000537796 TIMP1P01033 207 aa7.17□□□□□ -1.26
NECAP1-203ENST00000537796 POU1F1P28069 291 aa7.17□□□□□ -1.26
NECAP1-203ENST00000537796 KRT20P35900 424 aa7.17□□□□□ -1.26
NECAP1-203ENST00000537796 RPP38P78345 283 aaKnown RBP7.17□□□□□ -1.26
NECAP1-203ENST00000537796 LRRC74AQ0VAA2 488 aa7.17□□□□□ -1.26
NECAP1-203ENST00000537796 TP53BP2Q13625 1128 aa7.17□□□□□ -1.26
NECAP1-203ENST00000537796 CAMK1Q14012 370 aa7.17□□□□□ -1.26
NECAP1-203ENST00000537796 RGNQ15493 299 aa7.17□□□□□ -1.26
NECAP1-203ENST00000537796 MAPK11Q15759 364 aa7.17□□□□□ -1.26
NECAP1-203ENST00000537796 FAM109BQ6ICB4 259 aaPredicted RBP7.17□□□□□ -1.26
NECAP1-203ENST00000537796 TNFAIP8L2Q6P589 184 aaPredicted RBP7.17□□□□□ -1.26
NECAP1-203ENST00000537796 BRAT1Q6PJG6 821 aa7.17□□□□□ -1.26
NECAP1-203ENST00000537796 SLCO4C1Q6ZQN7 724 aa7.17□□□□□ -1.26
NECAP1-203ENST00000537796 ZNF784Q8NCA9 323 aaPredicted RBP7.17□□□□□ -1.26
NECAP1-203ENST00000537796 PJA1Q8NG27 643 aa7.17□□□□□ -1.26
NECAP1-203ENST00000537796 FAR1Q8WVX9 515 aa7.17□□□□□ -1.26
NECAP1-203ENST00000537796 HDAC2Q92769 488 aaKnown RBP7.17□□□□□ -1.26
NECAP1-203ENST00000537796 DNASE1L2Q92874 299 aa7.17□□□□□ -1.26
NECAP1-203ENST00000537796 BADQ92934 168 aa7.17□□□□□ -1.26
NECAP1-203ENST00000537796 FKBP10Q96AY3 582 aa7.17□□□□□ -1.26
NECAP1-203ENST00000537796 PLEKHA8Q96JA3 519 aa7.17□□□□□ -1.26
NECAP1-203ENST00000537796 FEVQ99581 238 aa7.17□□□□□ -1.26
NECAP1-203ENST00000537796 XKR8Q9H6D3 395 aa7.17□□□□□ -1.26
NECAP1-203ENST00000537796 CTPS2Q9NRF8 586 aa7.17□□□□□ -1.26
NECAP1-203ENST00000537796 SPATA6Q9NWH7 488 aaPredicted RBP7.17□□□□□ -1.26
NECAP1-203ENST00000537796 CUEDC1Q9NWM3 386 aaPredicted RBP7.17□□□□□ -1.26
NECAP1-203ENST00000537796 RAB23Q9ULC3 237 aa7.17□□□□□ -1.26
NECAP1-203ENST00000537796 ASF1AQ9Y294 204 aa7.17□□□□□ -1.26
NECAP1-203ENST00000537796 PCDHB11Q9Y5F2 797 aa7.17□□□□□ -1.26
NECAP1-203ENST00000537796 PCDHGA10Q9Y5H3 936 aa7.17□□□□□ -1.26
NECAP1-203ENST00000537796 SCN2AQ99250 2005 aa7.17□□□□□ -1.26
NECAP1-203ENST00000537796 HELZP42694 1942 aaKnown RBP7.17□□□□□ -1.26
NECAP1-203ENST00000537796 SLC5A10A0PJK1 596 aa7.16□□□□□ -1.26
NECAP1-203ENST00000537796 GRXCR2A6NFK2 248 aa7.16□□□□□ -1.26
NECAP1-203ENST00000537796 GLOD5A6NK44 160 aa7.16□□□□□ -1.26
NECAP1-203ENST00000537796 TPST2O60704 377 aa7.16□□□□□ -1.26
NECAP1-203ENST00000537796 C1orf105O95561 183 aa7.16□□□□□ -1.26
NECAP1-203ENST00000537796 MPC1LP0DKB6 136 aa7.16□□□□□ -1.26
NECAP1-203ENST00000537796 C6P13671 934 aa7.16□□□□□ -1.26
NECAP1-203ENST00000537796 PTNP21246 168 aa7.16□□□□□ -1.26
NECAP1-203ENST00000537796 PCMT1P22061 227 aa7.16□□□□□ -1.26
NECAP1-203ENST00000537796 MAPK1P28482 360 aa7.16□□□□□ -1.26
NECAP1-203ENST00000537796 PPM1AP35813 382 aa7.16□□□□□ -1.26
NECAP1-203ENST00000537796 MMP12P39900 470 aa7.16□□□□□ -1.26
NECAP1-203ENST00000537796 AP1S2P56377 157 aa7.16□□□□□ -1.26
NECAP1-203ENST00000537796 DBPQ10586 325 aaPredicted RBP7.16□□□□□ -1.26
NECAP1-203ENST00000537796 NR1D2Q14995 579 aa7.16□□□□□ -1.26
NECAP1-203ENST00000537796 SLC5A12Q1EHB4 618 aa7.16□□□□□ -1.26
NECAP1-203ENST00000537796 ADPRMQ3LIE5 342 aa7.16□□□□□ -1.26
NECAP1-203ENST00000537796 TBC1D25Q3MII6 688 aa7.16□□□□□ -1.26
NECAP1-203ENST00000537796 SHQ1Q6PI26 577 aaKnown RBP7.16□□□□□ -1.26
NECAP1-203ENST00000537796 NPAS3Q8IXF0 933 aa7.16□□□□□ -1.26
NECAP1-203ENST00000537796 SVOPLQ8N434 492 aa7.16□□□□□ -1.26
NECAP1-203ENST00000537796 TRAM1L1Q8N609 369 aa7.16□□□□□ -1.26
NECAP1-203ENST00000537796 SLC5A8Q8N695 610 aa7.16□□□□□ -1.26
NECAP1-203ENST00000537796 AMER3Q8N944 861 aa7.16□□□□□ -1.26
NECAP1-203ENST00000537796 DDHD1Q8NEL9 900 aa7.16□□□□□ -1.26
NECAP1-203ENST00000537796 FNDC8Q8TC99 324 aa7.16□□□□□ -1.26
NECAP1-203ENST00000537796 CSGALNACT1Q8TDX6 532 aa7.16□□□□□ -1.26
NECAP1-203ENST00000537796 ZFP90Q8TF47 636 aa7.16□□□□□ -1.26
NECAP1-203ENST00000537796 NIPSNAP1Q9BPW8 284 aa7.16□□□□□ -1.26
NECAP1-203ENST00000537796 WFDC6Q9BQY6 131 aa7.16□□□□□ -1.26
NECAP1-203ENST00000537796 SLC35A5Q9BS91 424 aa7.16□□□□□ -1.26
NECAP1-203ENST00000537796 REEP1Q9H902 201 aa7.16□□□□□ -1.26
NECAP1-203ENST00000537796 PLGRKTQ9HBL7 147 aa7.16□□□□□ -1.26
NECAP1-203ENST00000537796 RAD18Q9NS91 495 aa7.16□□□□□ -1.26
NECAP1-203ENST00000537796 KLHL20Q9Y2M5 609 aa7.16□□□□□ -1.26
NECAP1-203ENST00000537796 KCNE2Q9Y6J6 123 aa7.16□□□□□ -1.26
NECAP1-203ENST00000537796 DENND4CQ5VZ89 1909 aa7.16□□□□□ -1.26
NECAP1-203ENST00000537796 SUV39H1O43463 412 aa7.16□□□□□ -1.26
NECAP1-203ENST00000537796 TLL1O43897 1013 aa7.16□□□□□ -1.26
NECAP1-203ENST00000537796 MYO1DO94832 1006 aa7.16□□□□□ -1.26
NECAP1-203ENST00000537796 KLHL18O94889 574 aa7.16□□□□□ -1.26
NECAP1-203ENST00000537796 PCCBP05166 539 aa7.16□□□□□ -1.26
NECAP1-203ENST00000537796 IL3P08700 152 aa7.16□□□□□ -1.26
NECAP1-203ENST00000537796 C7P10643 843 aa7.16□□□□□ -1.26
NECAP1-203ENST00000537796 IDUAP35475 653 aa7.16□□□□□ -1.26
NECAP1-203ENST00000537796 KCNJ10P78508 379 aa7.16□□□□□ -1.26
NECAP1-203ENST00000537796 PHEXP78562 749 aa7.16□□□□□ -1.26
NECAP1-203ENST00000537796 MTAPQ13126 283 aa7.16□□□□□ -1.26
NECAP1-203ENST00000537796 CARTPTQ16568 116 aa7.16□□□□□ -1.26
NECAP1-203ENST00000537796 LEXMQ3ZCV2 418 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms