RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 OR52E4Q8NGH9 312 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 NINJ1Q92982 152 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 PYCR2Q96C36 320 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 KLRG1Q96E93 195 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 ZNF641Q96N77 438 aaPredicted RBP10.33□□□□□ -0.76
CLIP1-209ENST00000537178 EBF4Q9BQW3 602 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 TTYH2Q9BSA4 534 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 HCN2Q9UL51 889 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 YJEFN3A6XGL0 299 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 IRAK2O43187 625 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 ECI2O75521 394 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 PET100P0DJ07 73 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 UGT2B10P36537 528 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 KCNJ5P48544 419 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 RGS19P49795 217 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 CAPZA1P52907 286 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 SEC13P55735 322 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 IRF5Q13568 498 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 GON4LQ3T8J9 2241 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 ZNF404Q494X3 552 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 OR4F3Q6IEY1 312 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 TIGD4Q8IY51 512 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 THEM6Q8WUY1 208 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 C10orf82Q8WW14 230 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 TMEM41AQ96HV5 264 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 NECAB3Q96P71 396 aaPredicted RBP10.33□□□□□ -0.76
CLIP1-209ENST00000537178 GTPBP2Q9BX10 602 aaKnown RBP10.33□□□□□ -0.76
CLIP1-209ENST00000537178 SLC5A7Q9GZV3 580 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 IRF2BPLQ9H1B7 796 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 AKTIPQ9H8T0 292 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 CUEDC1Q9NWM3 386 aaPredicted RBP10.33□□□□□ -0.76
CLIP1-209ENST00000537178 FNIP2Q9P278 1114 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 PTBP2Q9UKA9 531 aaKnown RBP10.33□□□□□ -0.76
CLIP1-209ENST00000537178 BORCS7-ASMTA0A0B4J1R7 106 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 NEMP2A6NFY4 417 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 FOXO6A8MYZ6 492 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 SCAMP1O15126 338 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 NIPSNAP2O75323 286 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 CDRT1O95170 752 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 OPN1SWP03999 348 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 BCHEP06276 602 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 FUT4P22083 530 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 CHRNA4P43681 627 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 SELENOVP59797 346 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 GHRHRQ02643 423 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 DSG2Q14126 1118 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 LBX2Q6XYB7 198 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 LRRTM4Q86VH4 590 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 CDKN2AIPNLQ96HQ2 116 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 TSSK6Q9BXA6 273 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 NPLQ9BXD5 320 aaPredicted RBP10.33□□□□□ -0.76
CLIP1-209ENST00000537178 IKZF4Q9H2S9 585 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 FAM120CQ9NX05 1096 aaKnown RBP10.33□□□□□ -0.76
CLIP1-209ENST00000537178 ACTR3BQ9P1U1 418 aa10.33□□□□□ -0.76
CLIP1-209ENST00000537178 LCN1P31025 176 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 SLC6A6P31641 620 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 GSK3BP49841 420 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 RPL6Q02878 288 aaKnown RBP10.32□□□□□ -0.76
CLIP1-209ENST00000537178 PDGFRLQ15198 375 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 PLEKHN1Q494U1 663 aaPredicted RBP10.32□□□□□ -0.76
CLIP1-209ENST00000537178 NADK2Q4G0N4 442 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 TMEM198Q66K66 360 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 BRAT1Q6PJG6 821 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 ENPP7Q6UWV6 458 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 OTOP2Q7RTS6 562 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 RELTQ969Z4 430 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 SLC30A2Q9BRI3 323 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 TMED9Q9BVK6 235 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 DPEP3Q9H4B8 488 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 PRELID1Q9Y255 219 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 HSPB11Q9Y547 144 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 ARL5AQ9Y689 179 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 E2F3O00716 465 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 GP1BBP13224 206 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 PSMA6P60900 246 aaKnown RBP10.32□□□□□ -0.76
CLIP1-209ENST00000537178 ST3GAL4Q11206 333 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 RAB39AQ14964 217 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 ARSJQ5FYB0 599 aaPredicted RBP10.32□□□□□ -0.76
CLIP1-209ENST00000537178 TPGS2Q68CL5 300 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 GDPD4Q6W3E5 623 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 SSX6Q7RTT6 188 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 ZNF598Q86UK7 904 aaKnown RBP10.32□□□□□ -0.76
CLIP1-209ENST00000537178 C12orf40Q86WS4 652 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 OR13C4Q8NGS5 318 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 SHKBP1Q8TBC3 707 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 WACQ9BTA9 647 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 NOCTQ9UK39 431 aaKnown RBP10.32□□□□□ -0.76
CLIP1-209ENST00000537178 TLR6Q9Y2C9 796 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 A0A0J9YVX5 310 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 LOC100130705A0A1B0GUX0 176 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 A8MT66 165 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 PEX12O00623 359 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 TLX2O43763 284 aaPredicted RBP10.32□□□□□ -0.76
CLIP1-209ENST00000537178 MT-ND5P03915 603 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 CBSLP0DN79 551 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 ZNF8P17098 575 aaPredicted RBP10.32□□□□□ -0.76
CLIP1-209ENST00000537178 XRCC1P18887 633 aaPredicted RBP10.32□□□□□ -0.76
CLIP1-209ENST00000537178 MATN1P21941 496 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 CBSP35520 551 aa10.32□□□□□ -0.76
CLIP1-209ENST00000537178 NUDT6P53370 316 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms