RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 TSNARE1Q96NA8 513 aa16.96■□□□□ 0.3
TNFRSF1A-209ENST00000536717 MACROD1Q9BQ69 325 aa16.96■□□□□ 0.3
TNFRSF1A-209ENST00000536717 NMRAL1Q9HBL8 299 aa16.96■□□□□ 0.3
TNFRSF1A-209ENST00000536717 ATP13A2Q9NQ11 1180 aa16.96■□□□□ 0.3
TNFRSF1A-209ENST00000536717 ASH1LQ9NR48 2969 aaKnown RBP16.96■□□□□ 0.3
TNFRSF1A-209ENST00000536717 TRPC4Q9UBN4 977 aa16.96■□□□□ 0.3
TNFRSF1A-209ENST00000536717 LGALS13Q9UHV8 139 aa16.96■□□□□ 0.3
TNFRSF1A-209ENST00000536717 PRPF4O43172 522 aaKnown RBP eCLIP16.95■□□□□ 0.3
TNFRSF1A-209ENST00000536717 COL6A2P12110 1019 aa16.95■□□□□ 0.3
TNFRSF1A-209ENST00000536717 CD1DP15813 335 aa16.95■□□□□ 0.3
TNFRSF1A-209ENST00000536717 FOXK1P85037 733 aa16.95■□□□□ 0.3
TNFRSF1A-209ENST00000536717 AIMP2Q13155 320 aaKnown RBP16.95■□□□□ 0.3
TNFRSF1A-209ENST00000536717 RBBP7Q16576 425 aa16.95■□□□□ 0.3
TNFRSF1A-209ENST00000536717 SYT16Q17RD7 645 aa16.95■□□□□ 0.3
TNFRSF1A-209ENST00000536717 VWA5B1Q5TIE3 1220 aa16.95■□□□□ 0.3
TNFRSF1A-209ENST00000536717 KLC3Q6P597 504 aa16.95■□□□□ 0.3
TNFRSF1A-209ENST00000536717 HDXQ7Z353 690 aa16.95■□□□□ 0.3
TNFRSF1A-209ENST00000536717 ADAMTSL2Q86TH1 951 aa16.95■□□□□ 0.3
TNFRSF1A-209ENST00000536717 CYP4X1Q8N118 509 aa16.95■□□□□ 0.3
TNFRSF1A-209ENST00000536717 SPATA6LQ8N4H0 392 aa16.95■□□□□ 0.3
TNFRSF1A-209ENST00000536717 RBMXL3Q8N7X1 1067 aaKnown RBP16.95■□□□□ 0.3
TNFRSF1A-209ENST00000536717 OR11G2Q8NGC1 345 aa16.95■□□□□ 0.3
TNFRSF1A-209ENST00000536717 OR4K1Q8NGD4 311 aa16.95■□□□□ 0.3
TNFRSF1A-209ENST00000536717 SARGQ9BW04 601 aa16.95■□□□□ 0.3
TNFRSF1A-209ENST00000536717 UNKQ9C0B0 810 aaKnown RBP16.95■□□□□ 0.3
TNFRSF1A-209ENST00000536717 C3orf18Q9UK00 162 aa16.95■□□□□ 0.3
TNFRSF1A-209ENST00000536717 MAP4K5Q9Y4K4 846 aa16.95■□□□□ 0.3
TNFRSF1A-209ENST00000536717 RGS16O15492 202 aaPredicted RBP16.94■□□□□ 0.3
TNFRSF1A-209ENST00000536717 DPM1O60762 260 aa16.94■□□□□ 0.3
TNFRSF1A-209ENST00000536717 KLHL2O95198 593 aa16.94■□□□□ 0.3
TNFRSF1A-209ENST00000536717 GMPRP36959 345 aa16.94■□□□□ 0.3
TNFRSF1A-209ENST00000536717 IRF9Q00978 393 aa16.94■□□□□ 0.3
TNFRSF1A-209ENST00000536717 MEF2AQ02078 507 aaPredicted RBP16.94■□□□□ 0.3
TNFRSF1A-209ENST00000536717 TSNQ15631 228 aaKnown RBP16.94■□□□□ 0.3
TNFRSF1A-209ENST00000536717 NDUFA9Q16795 377 aa16.94■□□□□ 0.3
TNFRSF1A-209ENST00000536717 CATSPEREQ5SY80 951 aa16.94■□□□□ 0.3
TNFRSF1A-209ENST00000536717 ATG9BQ674R7 924 aa16.94■□□□□ 0.3
TNFRSF1A-209ENST00000536717 TMEM214Q6NUQ4 689 aaKnown RBP16.94■□□□□ 0.3
TNFRSF1A-209ENST00000536717 FRA10AC1Q70Z53 315 aa16.94■□□□□ 0.3
TNFRSF1A-209ENST00000536717 PRSS41Q7RTY9 318 aa16.94■□□□□ 0.3
TNFRSF1A-209ENST00000536717 CENPLQ8N0S6 344 aaPredicted RBP16.94■□□□□ 0.3
TNFRSF1A-209ENST00000536717 SHISA5Q8N114 240 aa16.94■□□□□ 0.3
TNFRSF1A-209ENST00000536717 KCT2Q8NC54 265 aa16.94■□□□□ 0.3
TNFRSF1A-209ENST00000536717 KCTD4Q8WVF5 259 aa16.94■□□□□ 0.3
TNFRSF1A-209ENST00000536717 NEIL2Q969S2 332 aa16.94■□□□□ 0.3
TNFRSF1A-209ENST00000536717 NXNL1Q96CM4 212 aa16.94■□□□□ 0.3
TNFRSF1A-209ENST00000536717 TGIF2Q9GZN2 237 aa16.94■□□□□ 0.3
TNFRSF1A-209ENST00000536717 SPNS1Q9H2V7 528 aa16.94■□□□□ 0.3
TNFRSF1A-209ENST00000536717 MKKSQ9NPJ1 570 aaPredicted RBP16.94■□□□□ 0.3
TNFRSF1A-209ENST00000536717 C5AR2Q9P296 337 aa16.94■□□□□ 0.3
TNFRSF1A-209ENST00000536717 OARD1Q9Y530 152 aa16.94■□□□□ 0.3
TNFRSF1A-209ENST00000536717 CPAMD8Q8IZJ3 1885 aa16.93■□□□□ 0.3
TNFRSF1A-209ENST00000536717 A0A1W2PPM1 405 aa16.93■□□□□ 0.3
TNFRSF1A-209ENST00000536717 GOLGA6L10A6NI86 522 aa16.93■□□□□ 0.3
TNFRSF1A-209ENST00000536717 GOLGA8RI6L899 631 aa16.93■□□□□ 0.3
TNFRSF1A-209ENST00000536717 SORBS2O94875 1100 aaKnown RBP16.93■□□□□ 0.3
TNFRSF1A-209ENST00000536717 NSA2O95478 260 aaKnown RBP16.93■□□□□ 0.3
TNFRSF1A-209ENST00000536717 ANXA5P08758 320 aa16.93■□□□□ 0.3
TNFRSF1A-209ENST00000536717 PYGBP11216 843 aa16.93■□□□□ 0.3
TNFRSF1A-209ENST00000536717 GRK3P35626 688 aa16.93■□□□□ 0.3
TNFRSF1A-209ENST00000536717 CD97P48960 835 aa16.93■□□□□ 0.3
TNFRSF1A-209ENST00000536717 CCR8P51685 355 aa16.93■□□□□ 0.3
TNFRSF1A-209ENST00000536717 EFNA3P52797 238 aa16.93■□□□□ 0.3
TNFRSF1A-209ENST00000536717 MAT1AQ00266 395 aaKnown RBP16.93■□□□□ 0.3
TNFRSF1A-209ENST00000536717 CDKL1Q00532 357 aa16.93■□□□□ 0.3
TNFRSF1A-209ENST00000536717 DLG1Q12959 904 aa16.93■□□□□ 0.3
TNFRSF1A-209ENST00000536717 TSNAXIP1Q2TAA8 658 aa16.93■□□□□ 0.3
TNFRSF1A-209ENST00000536717 TUBB8Q3ZCM7 444 aa16.93■□□□□ 0.3
TNFRSF1A-209ENST00000536717 ASPGQ86U10 573 aa16.93■□□□□ 0.3
TNFRSF1A-209ENST00000536717 HPS6Q86YV9 775 aa16.93■□□□□ 0.3
TNFRSF1A-209ENST00000536717 Q8NA96 180 aa16.93■□□□□ 0.3
TNFRSF1A-209ENST00000536717 MFSD9Q8NBP5 474 aa16.93■□□□□ 0.3
TNFRSF1A-209ENST00000536717 CAMKVQ8NCB2 501 aa16.93■□□□□ 0.3
TNFRSF1A-209ENST00000536717 OR9A4Q8NGU2 314 aa16.93■□□□□ 0.3
TNFRSF1A-209ENST00000536717 MIB2Q96AX9 1013 aa16.93■□□□□ 0.3
TNFRSF1A-209ENST00000536717 C8orf44Q96CB5 159 aa16.93■□□□□ 0.3
TNFRSF1A-209ENST00000536717 YIPF2Q9BWQ6 316 aa16.93■□□□□ 0.3
TNFRSF1A-209ENST00000536717 CENPHQ9H3R5 247 aa16.93■□□□□ 0.3
TNFRSF1A-209ENST00000536717 IGSF5Q9NSI5 407 aa16.93■□□□□ 0.3
TNFRSF1A-209ENST00000536717 C14orf105Q9NVL8 296 aa16.93■□□□□ 0.3
TNFRSF1A-209ENST00000536717 CCDC189A1A4V9 331 aa16.92■□□□□ 0.3
TNFRSF1A-209ENST00000536717 IDSB3KWA1 339 aa16.92■□□□□ 0.3
TNFRSF1A-209ENST00000536717 H0YIG0 161 aa16.92■□□□□ 0.3
TNFRSF1A-209ENST00000536717 IL1RNP18510 177 aa16.92■□□□□ 0.3
TNFRSF1A-209ENST00000536717 TFEBP19484 476 aa16.92■□□□□ 0.3
TNFRSF1A-209ENST00000536717 ITGA3P26006 1051 aa16.92■□□□□ 0.3
TNFRSF1A-209ENST00000536717 ACAP2Q15057 778 aa16.92■□□□□ 0.3
TNFRSF1A-209ENST00000536717 JMJD6Q6NYC1 403 aaPredicted RBP16.92■□□□□ 0.3
TNFRSF1A-209ENST00000536717 LCA5Q86VQ0 697 aa16.92■□□□□ 0.3
TNFRSF1A-209ENST00000536717 THOC6Q86W42 341 aaKnown RBP16.92■□□□□ 0.3
TNFRSF1A-209ENST00000536717 ZC3H7AQ8IWR0 971 aaKnown RBP16.92■□□□□ 0.3
TNFRSF1A-209ENST00000536717 ZNF740Q8NDX6 193 aa16.92■□□□□ 0.3
TNFRSF1A-209ENST00000536717 STAG3L4Q8TBR4 150 aa16.92■□□□□ 0.3
TNFRSF1A-209ENST00000536717 SLC13A3Q8WWT9 602 aa16.92■□□□□ 0.3
TNFRSF1A-209ENST00000536717 SLC5A11Q8WWX8 675 aa16.92■□□□□ 0.3
TNFRSF1A-209ENST00000536717 KIAA1191Q96A73 305 aa16.92■□□□□ 0.3
TNFRSF1A-209ENST00000536717 MFRPQ9BY79 579 aa16.92■□□□□ 0.3
TNFRSF1A-209ENST00000536717 ZBTB20Q9HC78 741 aaPredicted RBP16.92■□□□□ 0.3
TNFRSF1A-209ENST00000536717 SLC22A14Q9Y267 594 aa16.92■□□□□ 0.3
TNFRSF1A-209ENST00000536717 PTPN13Q12923 2485 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms