RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 SCAMP1O15126 338 aa21.75■■□□□ 1.07
HMGA2-206ENST00000536545 CPSF4O95639 269 aaKnown RBP21.75■■□□□ 1.07
HMGA2-206ENST00000536545 LDLRP01130 860 aa21.75■■□□□ 1.07
HMGA2-206ENST00000536545 FURINP09958 794 aa21.75■■□□□ 1.07
HMGA2-206ENST00000536545 ZCCHC18P0CG32 403 aa21.75■■□□□ 1.07
HMGA2-206ENST00000536545 GPX2P18283 190 aa21.75■■□□□ 1.07
HMGA2-206ENST00000536545 EFNA1P20827 205 aaPredicted RBP21.75■■□□□ 1.07
HMGA2-206ENST00000536545 HNRNPA2B1P22626 353 aaKnown RBP21.75■■□□□ 1.07
HMGA2-206ENST00000536545 LRRC74AQ0VAA2 488 aa21.75■■□□□ 1.07
HMGA2-206ENST00000536545 FAM98BQ52LJ0 330 aaKnown RBP21.75■■□□□ 1.07
HMGA2-206ENST00000536545 TMEM31Q5JXX7 168 aa21.75■■□□□ 1.07
HMGA2-206ENST00000536545 ENPP6Q6UWR7 440 aa21.75■■□□□ 1.07
HMGA2-206ENST00000536545 CBR4Q8N4T8 237 aa21.75■■□□□ 1.07
HMGA2-206ENST00000536545 SNX19Q92543 992 aa21.75■■□□□ 1.07
HMGA2-206ENST00000536545 BMFQ96LC9 184 aa21.75■■□□□ 1.07
HMGA2-206ENST00000536545 WDR92Q96MX6 357 aa21.75■■□□□ 1.07
HMGA2-206ENST00000536545 PRAP1Q96NZ9 151 aa21.75■■□□□ 1.07
HMGA2-206ENST00000536545 C9orf16Q9BUW7 83 aa21.75■■□□□ 1.07
HMGA2-206ENST00000536545 OSBPL11Q9BXB4 747 aa21.75■■□□□ 1.07
HMGA2-206ENST00000536545 ZNF717Q9BY31 904 aaPredicted RBP21.75■■□□□ 1.07
HMGA2-206ENST00000536545 OAZ3Q9UMX2 235 aa21.75■■□□□ 1.07
HMGA2-206ENST00000536545 IGKV1-8A0A0C4DH67 115 aa21.74■■□□□ 1.07
HMGA2-206ENST00000536545 LRRC72A6NJI9 287 aa21.74■■□□□ 1.07
HMGA2-206ENST00000536545 ACOX3O15254 700 aa21.74■■□□□ 1.07
HMGA2-206ENST00000536545 CREG1O75629 220 aa21.74■■□□□ 1.07
HMGA2-206ENST00000536545 KLK1P06870 262 aa21.74■■□□□ 1.07
HMGA2-206ENST00000536545 RPL3P39023 403 aaKnown RBP21.74■■□□□ 1.07
HMGA2-206ENST00000536545 CSNK1G2P78368 415 aa21.74■■□□□ 1.07
HMGA2-206ENST00000536545 TFF2Q03403 129 aa21.74■■□□□ 1.07
HMGA2-206ENST00000536545 GAB1Q13480 694 aa21.74■■□□□ 1.07
HMGA2-206ENST00000536545 NKG7Q16617 165 aa21.74■■□□□ 1.07
HMGA2-206ENST00000536545 TMTC4Q5T4D3 741 aa21.74■■□□□ 1.07
HMGA2-206ENST00000536545 KHDRBS2Q5VWX1 349 aaKnown RBP21.74■■□□□ 1.07
HMGA2-206ENST00000536545 ZNF621Q6ZSS3 439 aa21.74■■□□□ 1.07
HMGA2-206ENST00000536545 IKBIPQ70UQ0 350 aa21.74■■□□□ 1.07
HMGA2-206ENST00000536545 R3HCC1LQ7Z5L2 792 aaKnown RBP21.74■■□□□ 1.07
HMGA2-206ENST00000536545 CHERPQ8IWX8 916 aaKnown RBP21.74■■□□□ 1.07
HMGA2-206ENST00000536545 VPS37AQ8NEZ2 397 aa21.74■■□□□ 1.07
HMGA2-206ENST00000536545 OR2A1Q8NGT9 310 aa21.74■■□□□ 1.07
HMGA2-206ENST00000536545 NCLNQ969V3 563 aa21.74■■□□□ 1.07
HMGA2-206ENST00000536545 C8orf4Q9NR00 106 aa21.74■■□□□ 1.07
HMGA2-206ENST00000536545 DCAF13Q9NV06 445 aaKnown RBP21.74■■□□□ 1.07
HMGA2-206ENST00000536545 OLAHQ9NV23 265 aa21.74■■□□□ 1.07
HMGA2-206ENST00000536545 UBAP1Q9NZ09 502 aa21.74■■□□□ 1.07
HMGA2-206ENST00000536545 USP36Q9P275 1121 aaKnown RBP21.74■■□□□ 1.07
HMGA2-206ENST00000536545 PCDHB11Q9Y5F2 797 aa21.74■■□□□ 1.07
HMGA2-206ENST00000536545 ANKDD1BA6NHY2 528 aa21.74■■□□□ 1.07
HMGA2-206ENST00000536545 PLPP1O14494 284 aa21.74■■□□□ 1.07
HMGA2-206ENST00000536545 APBB3O95704 486 aa21.74■■□□□ 1.07
HMGA2-206ENST00000536545 TPP2P29144 1249 aaPredicted RBP21.74■■□□□ 1.07
HMGA2-206ENST00000536545 CHN2P52757 468 aa21.74■■□□□ 1.07
HMGA2-206ENST00000536545 TAS2R50P59544 299 aa21.74■■□□□ 1.07
HMGA2-206ENST00000536545 CYP4F2P78329 520 aa21.74■■□□□ 1.07
HMGA2-206ENST00000536545 CHRNB3Q05901 458 aa21.74■■□□□ 1.07
HMGA2-206ENST00000536545 DEPDC1Q5TB30 811 aa21.74■■□□□ 1.07
HMGA2-206ENST00000536545 ENPP7Q6UWV6 458 aa21.74■■□□□ 1.07
HMGA2-206ENST00000536545 ZZZ3Q8IYH5 903 aa21.74■■□□□ 1.07
HMGA2-206ENST00000536545 MFSD2AQ8NA29 543 aa21.74■■□□□ 1.07
HMGA2-206ENST00000536545 FBXO30Q8TB52 745 aa21.74■■□□□ 1.07
HMGA2-206ENST00000536545 SORBS1Q9BX66 1292 aaKnown RBP21.74■■□□□ 1.07
HMGA2-206ENST00000536545 UGT2B28Q9BY64 529 aa21.74■■□□□ 1.07
HMGA2-206ENST00000536545 ZNF639Q9UID6 485 aa21.74■■□□□ 1.07
HMGA2-206ENST00000536545 HEBP2Q9Y5Z4 205 aa21.74■■□□□ 1.07
HMGA2-206ENST00000536545 PLXND1Q9Y4D7 1925 aa21.73■■□□□ 1.07
HMGA2-206ENST00000536545 PRAMEF33A0A0G2JMD5 474 aa21.73■■□□□ 1.07
HMGA2-206ENST00000536545 PDLIM1O00151 329 aa21.73■■□□□ 1.07
HMGA2-206ENST00000536545 PRSS23O95084 383 aa21.73■■□□□ 1.07
HMGA2-206ENST00000536545 RASAL1O95294 804 aa21.73■■□□□ 1.07
HMGA2-206ENST00000536545 MC1RQ01726 317 aa21.73■■□□□ 1.07
HMGA2-206ENST00000536545 PRDX1Q06830 199 aaKnown RBP21.73■■□□□ 1.07
HMGA2-206ENST00000536545 KRT33BQ14525 404 aa21.73■■□□□ 1.07
HMGA2-206ENST00000536545 CPZQ66K79 652 aa21.73■■□□□ 1.07
HMGA2-206ENST00000536545 MTERF3Q96E29 417 aa21.73■■□□□ 1.07
HMGA2-206ENST00000536545 KIR3DX1Q9H7L2 352 aa21.73■■□□□ 1.07
HMGA2-206ENST00000536545 ATAD3AQ9NVI7 634 aa21.73■■□□□ 1.07
HMGA2-206ENST00000536545 SH3BP4Q9P0V3 963 aa21.73■■□□□ 1.07
HMGA2-206ENST00000536545 TBC1D29Q9UFV1 150 aa21.73■■□□□ 1.07
HMGA2-206ENST00000536545 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.73■■□□□ 1.07
HMGA2-206ENST00000536545 FEZF1A0PJY2 475 aa21.72■■□□□ 1.07
HMGA2-206ENST00000536545 PRICKLE3O43900 615 aaPredicted RBP21.72■■□□□ 1.07
HMGA2-206ENST00000536545 IL1RNP18510 177 aa21.72■■□□□ 1.07
HMGA2-206ENST00000536545 CD72P21854 359 aa21.72■■□□□ 1.07
HMGA2-206ENST00000536545 ABRAXAS1Q6UWZ7 409 aa21.72■■□□□ 1.07
HMGA2-206ENST00000536545 WASH2PQ6VEQ5 465 aa21.72■■□□□ 1.07
HMGA2-206ENST00000536545 GOT1L1Q8NHS2 421 aaPredicted RBP21.72■■□□□ 1.07
HMGA2-206ENST00000536545 NETO1Q8TDF5 533 aa21.72■■□□□ 1.07
HMGA2-206ENST00000536545 HMGB4Q8WW32 186 aa21.72■■□□□ 1.07
HMGA2-206ENST00000536545 PPCDCQ96CD2 204 aa21.72■■□□□ 1.07
HMGA2-206ENST00000536545 PHF7Q9BWX1 381 aaPredicted RBP21.72■■□□□ 1.07
HMGA2-206ENST00000536545 CHST8Q9H2A9 424 aa21.72■■□□□ 1.07
HMGA2-206ENST00000536545 TPT1P8Q9HAU6 139 aa21.72■■□□□ 1.07
HMGA2-206ENST00000536545 AHSPQ9NZD4 102 aa21.72■■□□□ 1.07
HMGA2-206ENST00000536545 EBF1Q9UH73 591 aa21.72■■□□□ 1.07
HMGA2-206ENST00000536545 PNMA8BQ9ULN7 279 aaPredicted RBP21.72■■□□□ 1.07
HMGA2-206ENST00000536545 DPPA5A6NC42 116 aa21.71■■□□□ 1.07
HMGA2-206ENST00000536545 DLGAP1O14490 977 aa21.71■■□□□ 1.07
HMGA2-206ENST00000536545 CLOCKO15516 846 aa21.71■■□□□ 1.07
HMGA2-206ENST00000536545 EML2O95834 649 aa21.71■■□□□ 1.07
HMGA2-206ENST00000536545 IL3P08700 152 aa21.71■■□□□ 1.07
HMGA2-206ENST00000536545 PEBP1P30086 187 aaKnown RBP21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms