RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 EFCAB10A6NFE3 127 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 LACTBL1A8MY62 500 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 HNRNPCL3B7ZW38 293 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 ARVCFO00192 962 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 EIF3DO15371 548 aaKnown RBP eCLIP3.6□□□□□ -1.83
MCF2-210ENST00000536274 SIAH2O43255 324 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 OR1I1O60431 355 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 MMP20O60882 483 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 CREG1O75629 220 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 MOCS2O96007 188 aaPredicted RBP3.6□□□□□ -1.83
MCF2-210ENST00000536274 ASS1P00966 412 aaKnown RBP3.6□□□□□ -1.83
MCF2-210ENST00000536274 HNRNPCL4P0DMR1 293 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 COX5BP10606 129 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 SFTPCP11686 197 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 PROZP22891 400 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 CST5P28325 142 aaPredicted RBP3.6□□□□□ -1.83
MCF2-210ENST00000536274 SDC4P31431 198 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 CTNNB1P35222 781 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 CTSOP43234 321 aaPredicted RBP3.6□□□□□ -1.83
MCF2-210ENST00000536274 RAP1GAPP47736 663 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 RAB13P51153 203 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 KCNQ1P51787 676 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 SEC13P55735 322 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 RAB8AP61006 207 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 SH3BP2P78314 561 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 RPP38P78345 283 aaKnown RBP3.6□□□□□ -1.83
MCF2-210ENST00000536274 ACY1Q03154 408 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 SLC3A1Q07837 685 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 SEMA5AQ13591 1074 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 USP10Q14694 798 aaKnown RBP3.6□□□□□ -1.83
MCF2-210ENST00000536274 NOMO1Q15155 1222 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 CELF3Q5SZQ8 465 aaKnown RBP3.6□□□□□ -1.83
MCF2-210ENST00000536274 SLC35F1Q5T1Q4 408 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 CERCAMQ5T4B2 595 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 BICRALQ6AI39 1079 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 FAM45BPQ6NSW5 357 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 MOXD1Q6UVY6 613 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 NIPA1Q7RTP0 329 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 BMP8AQ7Z5Y6 402 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 MILR1Q7Z6M3 343 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 MAP4K3Q8IVH8 894 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 MFSD6LQ8IWD5 586 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 DENND6AQ8IWF6 608 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 PRSS58Q8IYP2 241 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 CENPLQ8N0S6 344 aaPredicted RBP3.6□□□□□ -1.83
MCF2-210ENST00000536274 RELL2Q8NC24 303 aaPredicted RBP3.6□□□□□ -1.83
MCF2-210ENST00000536274 ITFG1Q8TB96 612 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 FAM45AQ8TCE6 357 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 SFT2D1Q8WV19 159 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 COPS5Q92905 334 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 CHFRQ96EP1 664 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 CRELD1Q96HD1 420 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 DIRAS2Q96HU8 199 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 NELL2Q99435 816 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 PFDN5Q99471 154 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 TEKT3Q9BXF9 490 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 TEX12Q9BXU0 123 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 SLC6A15Q9H2J7 730 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 RIOX1Q9H6W3 641 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 NMUR1Q9HB89 426 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 CHMP1AQ9HD42 196 aaPredicted RBP3.6□□□□□ -1.83
MCF2-210ENST00000536274 B3GAT2Q9NPZ5 323 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 TMPRSS4Q9NRS4 437 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 LANCL2Q9NS86 450 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 THUMPD1Q9NXG2 353 aaKnown RBP3.6□□□□□ -1.83
MCF2-210ENST00000536274 GHRLQ9UBU3 117 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 ZNF490Q9ULM2 529 aaPredicted RBP3.6□□□□□ -1.83
MCF2-210ENST00000536274 CLCA2Q9UQC9 943 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 ENTPD4Q9Y227 616 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 NDUFAF1Q9Y375 327 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 NAALAD2Q9Y3Q0 740 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 PCDHA9Q9Y5H5 950 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 PCDHA1Q9Y5I3 950 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 TRIP11Q15643 1979 aa3.6□□□□□ -1.83
MCF2-210ENST00000536274 NUP214P35658 2090 aaPredicted RBP3.59□□□□□ -1.83
MCF2-210ENST00000536274 NINQ8N4C6 2090 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 FAM240BA0A1B0GVZ2 78 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 OR6C65A6NJZ3 312 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 ISM1B1AKI9 464 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 H7C2Y5 167 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 PDCD5O14737 125 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 KIAA0355O15063 1070 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 GSTA4O15217 222 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 SIX3O95343 332 aaPredicted RBP3.59□□□□□ -1.83
MCF2-210ENST00000536274 POP4O95707 220 aaKnown RBP3.59□□□□□ -1.83
MCF2-210ENST00000536274 PGK1P00558 417 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 TPOP07202 933 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 TSPAN19P0C672 248 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 SLC2A4P14672 509 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 HPGDP15428 266 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 RHCEP18577 417 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 ACO1P21399 889 aaKnown RBP3.59□□□□□ -1.83
MCF2-210ENST00000536274 PTX3P26022 381 aaPredicted RBP3.59□□□□□ -1.83
MCF2-210ENST00000536274 CTGFP29279 349 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 TSPAN7P41732 249 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 RPS5P46782 204 aaKnown RBP3.59□□□□□ -1.83
MCF2-210ENST00000536274 JAK3P52333 1124 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 CTSCP53634 463 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 ATP12AP54707 1039 aa3.59□□□□□ -1.83
MCF2-210ENST00000536274 GABARAPL2P60520 117 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms