RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 KREMEN2Q8NCW0 462 aa15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 OR4A15Q8NGL6 344 aa15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 RHNO1Q9BSD3 238 aa15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 MROQ9BYG7 248 aa15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 PAK6Q9NQU5 681 aaPredicted RBP15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 SPHK2Q9NRA0 654 aa15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 ATP6V1HQ9UI12 483 aa15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 OGDHLQ9ULD0 1010 aa15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 PCDHGA6Q9Y5G7 932 aa15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 PDE4DIPQ5VU43 2346 aa15.43■□□□□ 0.06
CHMP1A-202ENST00000535997 TOR1BO14657 336 aa15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 GCM2O75603 506 aaPredicted RBP15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 CCR2P41597 374 aa15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 DEFB103AP81534 67 aa15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 TRIM16LQ309B1 348 aa15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 UBE2UQ5VVX9 321 aa15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 TMEM215Q68D42 235 aa15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 ADNP2Q6IQ32 1131 aa15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 P3H2Q8IVL5 708 aa15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.42■□□□□ 0.065e-11■■■■■ 32.7
CHMP1A-202ENST00000535997 HCAR2Q8TDS4 363 aa15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 PHF10Q8WUB8 498 aaKnown RBP15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 APH1BQ8WW43 257 aa15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 NEIL2Q969S2 332 aa15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 PLCXD1Q9NUJ7 323 aa15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 ATAD3AQ9NVI7 634 aa15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 SELENONQ9NZV5 590 aa15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 NDUFAF4Q9P032 175 aa15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 PLXNA2O75051 1894 aa15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 PRRC2BQ5JSZ5 2229 aaKnown RBP15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 DOCK6Q96HP0 2047 aa15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 OR2A25A4D2G3 310 aa15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 FOXE1O00358 373 aaPredicted RBP15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 PCDH7O60245 1069 aa15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 SH3BGRLO75368 114 aa15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 FGF18O76093 207 aa15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 XPAP23025 273 aaPredicted RBP15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 PTX3P26022 381 aaPredicted RBP15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 AQP1P29972 269 aa15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 RPS13P62277 151 aaKnown RBP15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 LSM3P62310 102 aaKnown RBP15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 RBBP4Q09028 425 aa15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 GAB1Q13480 694 aa15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 ZNF805Q5CZA5 627 aa15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 TMEM220Q6QAJ8 160 aa15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 DPPA4Q7L190 304 aa15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 BTLAQ7Z6A9 289 aa15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 KIAA0907Q7Z7F0 614 aaPredicted RBP15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 ADCK1Q86TW2 530 aa15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 LILRA3Q8N6C8 439 aaPredicted RBP15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 FBXO15Q8NCQ5 510 aaPredicted RBP15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 GPR156Q8NFN8 814 aa15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 OR6Q1Q8NGQ2 317 aa15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 FCGR1BQ92637 280 aa15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 FOXJ1Q92949 421 aa15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 LRIG1Q96JA1 1093 aa15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 ALPK1Q96QP1 1244 aa15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 EPHX3Q9H6B9 360 aa15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 REEP4Q9H6H4 257 aa15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 PRM3Q9NNZ6 103 aa15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 DKK3Q9UBP4 350 aa15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 DOLKQ9UPQ8 538 aa15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 EXO1Q9UQ84 846 aaKnown RBP15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 LYVE1Q9Y5Y7 322 aa15.42■□□□□ 0.06
CHMP1A-202ENST00000535997 PCM1Q15154 2024 aa15.41■□□□□ 0.06
CHMP1A-202ENST00000535997 TTC34A8MYJ7 566 aa15.41■□□□□ 0.06
CHMP1A-202ENST00000535997 BOLA2-SMG1P6H3BVE0 249 aa15.41■□□□□ 0.06
CHMP1A-202ENST00000535997 TNFRSF11BO00300 401 aa15.41■□□□□ 0.06
CHMP1A-202ENST00000535997 CDH3P22223 829 aa15.41■□□□□ 0.06
CHMP1A-202ENST00000535997 CRATP43155 626 aa15.41■□□□□ 0.06
CHMP1A-202ENST00000535997 MVDP53602 400 aa15.41■□□□□ 0.06
CHMP1A-202ENST00000535997 ZNF763Q0D2J5 394 aa15.41■□□□□ 0.06
CHMP1A-202ENST00000535997 ELP6Q0PNE2 266 aa15.41■□□□□ 0.06
CHMP1A-202ENST00000535997 CYP2A13Q16696 494 aa15.41■□□□□ 0.06
CHMP1A-202ENST00000535997 HIST2H2ACQ16777 129 aaPredicted RBP15.41■□□□□ 0.06
CHMP1A-202ENST00000535997 TRIM60Q495X7 471 aa15.41■□□□□ 0.06
CHMP1A-202ENST00000535997 PAGE2BQ5JRK9 111 aa15.41■□□□□ 0.06
CHMP1A-202ENST00000535997 AHSA2Q719I0 299 aa15.41■□□□□ 0.06
CHMP1A-202ENST00000535997 TSEN54Q7Z6J9 526 aaKnown RBP15.41■□□□□ 0.06
CHMP1A-202ENST00000535997 NLRP8Q86W28 1048 aa15.41■□□□□ 0.06
CHMP1A-202ENST00000535997 SPPL2AQ8TCT8 520 aa15.41■□□□□ 0.06
CHMP1A-202ENST00000535997 FEVQ99581 238 aa15.41■□□□□ 0.06
CHMP1A-202ENST00000535997 LINC00597Q9H2U6 94 aa15.41■□□□□ 0.06
CHMP1A-202ENST00000535997 TDP1Q9NUW8 608 aa15.41■□□□□ 0.06
CHMP1A-202ENST00000535997 GPATCH2Q9NW75 528 aa15.41■□□□□ 0.06
CHMP1A-202ENST00000535997 GIN1Q9NXP7 522 aa15.41■□□□□ 0.06
CHMP1A-202ENST00000535997 PMF1-BGLAPU3KQ54 211 aa15.41■□□□□ 0.06
CHMP1A-202ENST00000535997 CXCL14O95715 111 aa15.41■□□□□ 0.06
CHMP1A-202ENST00000535997 MYCP01106 439 aaPredicted RBP15.41■□□□□ 0.06
CHMP1A-202ENST00000535997 ADH1AP07327 375 aa15.41■□□□□ 0.06
CHMP1A-202ENST00000535997 SRPRAP08240 638 aaKnown RBP15.41■□□□□ 0.06
CHMP1A-202ENST00000535997 ANXA8P13928 327 aa15.41■□□□□ 0.06
CHMP1A-202ENST00000535997 CD36P16671 472 aa15.41■□□□□ 0.06
CHMP1A-202ENST00000535997 NPPBP16860 134 aa15.41■□□□□ 0.06
CHMP1A-202ENST00000535997 DDX6P26196 483 aaKnown RBP eCLIP15.41■□□□□ 0.06
CHMP1A-202ENST00000535997 PDHA2P29803 388 aa15.41■□□□□ 0.06
CHMP1A-202ENST00000535997 BDKRB1P46663 353 aa15.41■□□□□ 0.06
CHMP1A-202ENST00000535997 HBA1P69905 142 aa15.41■□□□□ 0.06
CHMP1A-202ENST00000535997 PPIGQ13427 754 aaKnown RBP eCLIP15.41■□□□□ 0.067e-7■■■□□ 15.5
CHMP1A-202ENST00000535997 GPR153Q6NV75 609 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms