RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 DCAF10Q5QP82 559 aa20.24■□□□□ 0.83
PKP3-211ENST00000534401 TEX35Q5T0J7 233 aa20.24■□□□□ 0.83
PKP3-211ENST00000534401 KIRREL2Q6UWL6 708 aa20.24■□□□□ 0.83
PKP3-211ENST00000534401 LAPTM4BQ86VI4 370 aa20.24■□□□□ 0.83
PKP3-211ENST00000534401 PDSS2Q86YH6 399 aa20.24■□□□□ 0.83
PKP3-211ENST00000534401 CNPY4Q8N129 248 aa20.24■□□□□ 0.83
PKP3-211ENST00000534401 OR9A4Q8NGU2 314 aa20.24■□□□□ 0.83
PKP3-211ENST00000534401 MIEF2Q96C03 454 aa20.24■□□□□ 0.83
PKP3-211ENST00000534401 AICDAQ9GZX7 198 aa20.24■□□□□ 0.83
PKP3-211ENST00000534401 TRPC4Q9UBN4 977 aa20.24■□□□□ 0.83
PKP3-211ENST00000534401 EXOC1LA0A1B0GW35 172 aa20.23■□□□□ 0.83
PKP3-211ENST00000534401 AGPSO00116 658 aa20.23■□□□□ 0.83
PKP3-211ENST00000534401 H2AFYO75367 372 aaKnown RBP20.23■□□□□ 0.83
PKP3-211ENST00000534401 WFS1O76024 890 aa20.23■□□□□ 0.83
PKP3-211ENST00000534401 BMP10O95393 424 aa20.23■□□□□ 0.83
PKP3-211ENST00000534401 CYC1P08574 325 aa20.23■□□□□ 0.83
PKP3-211ENST00000534401 CD22P20273 847 aa20.23■□□□□ 0.83
PKP3-211ENST00000534401 AGTR2P50052 363 aa20.23■□□□□ 0.83
PKP3-211ENST00000534401 HERC3Q15034 1050 aa20.23■□□□□ 0.83
PKP3-211ENST00000534401 PDK4Q16654 411 aa20.23■□□□□ 0.83
PKP3-211ENST00000534401 FBXO48Q5FWF7 155 aa20.23■□□□□ 0.83
PKP3-211ENST00000534401 METTL2BQ6P1Q9 378 aaKnown RBP20.23■□□□□ 0.83
PKP3-211ENST00000534401 ZC3H7AQ8IWR0 971 aaKnown RBP20.23■□□□□ 0.83
PKP3-211ENST00000534401 FER1L6-AS2Q96M78 137 aa20.23■□□□□ 0.83
PKP3-211ENST00000534401 HELZ2Q9BYK8 2649 aaKnown RBP20.23■□□□□ 0.83
PKP3-211ENST00000534401 SOX17Q9H6I2 414 aaPredicted RBP20.23■□□□□ 0.83
PKP3-211ENST00000534401 CLK4Q9HAZ1 481 aaKnown RBP20.23■□□□□ 0.83
PKP3-211ENST00000534401 ZNF358Q9NW07 568 aa20.23■□□□□ 0.83
PKP3-211ENST00000534401 ZNF490Q9ULM2 529 aaPredicted RBP20.23■□□□□ 0.83
PKP3-211ENST00000534401 PCDHGB7Q9Y5F8 929 aa20.23■□□□□ 0.83
PKP3-211ENST00000534401 K7EM74 188 aa20.22■□□□□ 0.83
PKP3-211ENST00000534401 PCDH17O14917 1159 aa20.22■□□□□ 0.83
PKP3-211ENST00000534401 NDUFS4O43181 175 aa20.22■□□□□ 0.83
PKP3-211ENST00000534401 GALR3O60755 368 aaPredicted RBP20.22■□□□□ 0.83
PKP3-211ENST00000534401 TBX6O95947 436 aaPredicted RBP20.22■□□□□ 0.83
PKP3-211ENST00000534401 S100BP04271 92 aaPredicted RBP20.22■□□□□ 0.83
PKP3-211ENST00000534401 IL1RNP18510 177 aa20.22■□□□□ 0.83
PKP3-211ENST00000534401 EFNA3P52797 238 aa20.22■□□□□ 0.83
PKP3-211ENST00000534401 CHAF1BQ13112 559 aa20.22■□□□□ 0.83
PKP3-211ENST00000534401 DOC2AQ14183 400 aa20.22■□□□□ 0.83
PKP3-211ENST00000534401 NAA30Q147X3 362 aaPredicted RBP20.22■□□□□ 0.83
PKP3-211ENST00000534401 SETDB1Q15047 1291 aa20.22■□□□□ 0.83
PKP3-211ENST00000534401 PCBP2Q15366 365 aaKnown RBP eCLIP20.22■□□□□ 0.83
PKP3-211ENST00000534401 TMIGD1Q6UXZ0 262 aa20.22■□□□□ 0.83
PKP3-211ENST00000534401 GSPT2Q8IYD1 628 aaKnown RBP20.22■□□□□ 0.83
PKP3-211ENST00000534401 TMEM151AQ8N4L1 468 aa20.22■□□□□ 0.83
PKP3-211ENST00000534401 TTLQ8NG68 377 aa20.22■□□□□ 0.83
PKP3-211ENST00000534401 UTP15Q8TED0 518 aaKnown RBP20.22■□□□□ 0.83
PKP3-211ENST00000534401 MTBPQ96DY7 904 aa20.22■□□□□ 0.83
PKP3-211ENST00000534401 PTCD3Q96EY7 689 aaKnown RBP20.22■□□□□ 0.83
PKP3-211ENST00000534401 VPS11Q9H270 941 aa20.22■□□□□ 0.83
PKP3-211ENST00000534401 RHBGQ9H310 441 aa20.22■□□□□ 0.83
PKP3-211ENST00000534401 ANKHQ9HCJ1 492 aa20.22■□□□□ 0.83
PKP3-211ENST00000534401 ACSS2Q9NR19 701 aa20.22■□□□□ 0.83
PKP3-211ENST00000534401 TNRC6AQ8NDV7 1962 aaKnown RBP20.22■□□□□ 0.83
PKP3-211ENST00000534401 SUPT3HB4E1H0 165 aa20.21■□□□□ 0.83
PKP3-211ENST00000534401 K7EPI3 171 aa20.21■□□□□ 0.83
PKP3-211ENST00000534401 PEX12O00623 359 aa20.21■□□□□ 0.83
PKP3-211ENST00000534401 CLGNO14967 610 aa20.21■□□□□ 0.83
PKP3-211ENST00000534401 SUPT3HO75486 399 aa20.21■□□□□ 0.83
PKP3-211ENST00000534401 KLHL18O94889 574 aa20.21■□□□□ 0.83
PKP3-211ENST00000534401 RBP1P09455 135 aa20.21■□□□□ 0.83
PKP3-211ENST00000534401 ALOX12P18054 663 aa20.21■□□□□ 0.83
PKP3-211ENST00000534401 GLRBP48167 497 aa20.21■□□□□ 0.83
PKP3-211ENST00000534401 ALDH18A1P54886 795 aaKnown RBP20.21■□□□□ 0.83
PKP3-211ENST00000534401 RGS1Q08116 209 aa20.21■□□□□ 0.83
PKP3-211ENST00000534401 SLBPQ14493 270 aaKnown RBP eCLIP20.21■□□□□ 0.83
PKP3-211ENST00000534401 SYT16Q17RD7 645 aa20.21■□□□□ 0.83
PKP3-211ENST00000534401 TSNAXIP1Q2TAA8 658 aa20.21■□□□□ 0.83
PKP3-211ENST00000534401 ADPRMQ3LIE5 342 aa20.21■□□□□ 0.83
PKP3-211ENST00000534401 LACTB2Q53H82 288 aaPredicted RBP20.21■□□□□ 0.83
PKP3-211ENST00000534401 LGSNQ5TDP6 509 aa20.21■□□□□ 0.83
PKP3-211ENST00000534401 NIPAL1Q6NVV3 410 aa20.21■□□□□ 0.83
PKP3-211ENST00000534401 KLC3Q6P597 504 aa20.21■□□□□ 0.83
PKP3-211ENST00000534401 TMEM205Q6UW68 189 aa20.21■□□□□ 0.83
PKP3-211ENST00000534401 SHISA6Q6ZSJ9 500 aa20.21■□□□□ 0.83
PKP3-211ENST00000534401 VN1R5Q7Z5H4 357 aa20.21■□□□□ 0.83
PKP3-211ENST00000534401 SHISA5Q8N114 240 aa20.21■□□□□ 0.83
PKP3-211ENST00000534401 KRT78Q8N1N4 520 aa20.21■□□□□ 0.83
PKP3-211ENST00000534401 OR11G2Q8NGC1 345 aa20.21■□□□□ 0.83
PKP3-211ENST00000534401 MZB1Q8WU39 189 aa20.21■□□□□ 0.83
PKP3-211ENST00000534401 CRB3Q9BUF7 120 aa20.21■□□□□ 0.83
PKP3-211ENST00000534401 EFCAB11Q9BUY7 163 aa20.21■□□□□ 0.83
PKP3-211ENST00000534401 C3orf18Q9UK00 162 aa20.21■□□□□ 0.83
PKP3-211ENST00000534401 TP53TG5Q9Y2B4 290 aa20.21■□□□□ 0.83
PKP3-211ENST00000534401 CNTRLQ7Z7A1 2325 aa20.21■□□□□ 0.83
PKP3-211ENST00000534401 LOC102723996A0A087X1L8 192 aa20.2■□□□□ 0.82
PKP3-211ENST00000534401 ESPNB1AK53 854 aa20.2■□□□□ 0.82
PKP3-211ENST00000534401 IDSB3KWA1 339 aa20.2■□□□□ 0.82
PKP3-211ENST00000534401 CCNT2O60583 730 aaKnown RBP20.2■□□□□ 0.82
PKP3-211ENST00000534401 CLEC3AO75596 197 aa20.2■□□□□ 0.82
PKP3-211ENST00000534401 PDGFAP04085 211 aa20.2■□□□□ 0.82
PKP3-211ENST00000534401 IL10P22301 178 aa20.2■□□□□ 0.82
PKP3-211ENST00000534401 CCL11P51671 97 aa20.2■□□□□ 0.82
PKP3-211ENST00000534401 MAT1AQ00266 395 aaKnown RBP20.2■□□□□ 0.82
PKP3-211ENST00000534401 NFATC3Q12968 1075 aa20.2■□□□□ 0.82
PKP3-211ENST00000534401 LAPTM5Q13571 262 aa20.2■□□□□ 0.82
PKP3-211ENST00000534401 RBBP5Q15291 538 aaKnown RBP20.2■□□□□ 0.82
PKP3-211ENST00000534401 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.2■□□□□ 0.82
PKP3-211ENST00000534401 OR51Q1Q8NH59 317 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms