RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 PHACTR1Q9C0D0 580 aa8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 VN1R1Q9GZP7 353 aa8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 ENKD1Q9H0I2 346 aa8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 CENPHQ9H3R5 247 aa8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 MKKSQ9NPJ1 570 aaPredicted RBP8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 CHRAC1Q9NRG0 131 aa8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 TREX1Q9NSU2 369 aa8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 CATSPERZQ9NTU4 200 aa8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 C14orf105Q9NVL8 296 aa8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 ANKRD10Q9NXR5 420 aa8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 ASIC3Q9UHC3 531 aa8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 MKL2Q9ULH7 1088 aa8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 MEMO1Q9Y316 297 aa8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 NEU2Q9Y3R4 380 aa8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 NSD1Q96L73 2696 aaPredicted RBP8.69□□□□□ -1.02
CHMP4A-205ENST00000531158 NCKAP5O14513 1909 aa8.68□□□□□ -1.02
CHMP4A-205ENST00000531158 ARHGAP21Q5T5U3 1957 aa8.68□□□□□ -1.02
CHMP4A-205ENST00000531158 TMEM200CA6NKL6 621 aa8.68□□□□□ -1.02
CHMP4A-205ENST00000531158 ERI2A8K979 691 aaKnown RBP8.68□□□□□ -1.02
CHMP4A-205ENST00000531158 HAT1O14929 419 aa8.68□□□□□ -1.02
CHMP4A-205ENST00000531158 CD3EAPO15446 510 aaKnown RBP8.68□□□□□ -1.02
CHMP4A-205ENST00000531158 WFS1O76024 890 aa8.68□□□□□ -1.02
CHMP4A-205ENST00000531158 CLDN14O95500 239 aa8.68□□□□□ -1.02
CHMP4A-205ENST00000531158 SHBGP04278 402 aa8.68□□□□□ -1.02
CHMP4A-205ENST00000531158 HEXBP07686 556 aa8.68□□□□□ -1.02
CHMP4A-205ENST00000531158 F7P08709 466 aaPredicted RBP8.68□□□□□ -1.02
CHMP4A-205ENST00000531158 C8orf89P0DMQ9 161 aa8.68□□□□□ -1.02
CHMP4A-205ENST00000531158 RPS3P23396 243 aaKnown RBP eCLIP8.68□□□□□ -1.02
CHMP4A-205ENST00000531158 IVDP26440 423 aa8.68□□□□□ -1.02
CHMP4A-205ENST00000531158 TUBA3CQ13748 450 aa8.68□□□□□ -1.02
CHMP4A-205ENST00000531158 SLC29A2Q14542 456 aa8.68□□□□□ -1.02
CHMP4A-205ENST00000531158 TMED2Q15363 201 aa8.68□□□□□ -1.02
CHMP4A-205ENST00000531158 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.68□□□□□ -1.021e-13■■■□□ 15.3
CHMP4A-205ENST00000531158 ACER2Q5QJU3 275 aa8.68□□□□□ -1.02
CHMP4A-205ENST00000531158 ABHD17BQ5VST6 288 aa8.68□□□□□ -1.02
CHMP4A-205ENST00000531158 ICE2Q659A1 982 aa8.68□□□□□ -1.02
CHMP4A-205ENST00000531158 TTC19Q6DKK2 380 aaPredicted RBP8.68□□□□□ -1.02
CHMP4A-205ENST00000531158 SPINK14Q6IE38 97 aa8.68□□□□□ -1.02
CHMP4A-205ENST00000531158 MTFR2Q6P444 385 aa8.68□□□□□ -1.02
CHMP4A-205ENST00000531158 TUBA3EQ6PEY2 450 aa8.68□□□□□ -1.02
CHMP4A-205ENST00000531158 C3P1Q6ZMU1 363 aa8.68□□□□□ -1.02
CHMP4A-205ENST00000531158 VN1R4Q7Z5H5 301 aa8.68□□□□□ -1.02
CHMP4A-205ENST00000531158 ZNF227Q86WZ6 799 aa8.68□□□□□ -1.02
CHMP4A-205ENST00000531158 CRLF3Q8IUI8 442 aa8.68□□□□□ -1.02
CHMP4A-205ENST00000531158 LRRC56Q8IYG6 542 aaPredicted RBP8.68□□□□□ -1.02
CHMP4A-205ENST00000531158 C10orf67Q8IYJ2 551 aa8.68□□□□□ -1.02
CHMP4A-205ENST00000531158 OR9A4Q8NGU2 314 aa8.68□□□□□ -1.02
CHMP4A-205ENST00000531158 THAP3Q8WTV1 239 aaPredicted RBP8.68□□□□□ -1.02
CHMP4A-205ENST00000531158 LPGAT1Q92604 370 aa8.68□□□□□ -1.02
CHMP4A-205ENST00000531158 C14orf79Q96F83 325 aa8.68□□□□□ -1.02
CHMP4A-205ENST00000531158 GPR137Q96N19 417 aa8.68□□□□□ -1.02
CHMP4A-205ENST00000531158 SLC30A3Q99726 388 aa8.68□□□□□ -1.02
CHMP4A-205ENST00000531158 MACROD1Q9BQ69 325 aa8.68□□□□□ -1.02
CHMP4A-205ENST00000531158 TUBB6Q9BUF5 446 aa8.68□□□□□ -1.02
CHMP4A-205ENST00000531158 YIPF2Q9BWQ6 316 aa8.68□□□□□ -1.02
CHMP4A-205ENST00000531158 TSSK1BQ9BXA7 367 aa8.68□□□□□ -1.02
CHMP4A-205ENST00000531158 NSRP1Q9H0G5 558 aaKnown RBP8.68□□□□□ -1.02
CHMP4A-205ENST00000531158 CDC42EP4Q9H3Q1 356 aaKnown RBP8.68□□□□□ -1.02
CHMP4A-205ENST00000531158 STMN3Q9NZ72 180 aa8.68□□□□□ -1.02
CHMP4A-205ENST00000531158 SPATA7Q9P0W8 599 aa8.68□□□□□ -1.02
CHMP4A-205ENST00000531158 ASB1Q9Y576 335 aa8.68□□□□□ -1.02
CHMP4A-205ENST00000531158 A8MUI8 341 aa8.67□□□□□ -1.02
CHMP4A-205ENST00000531158 TP73O15350 636 aa8.67□□□□□ -1.02
CHMP4A-205ENST00000531158 PSMD3O43242 534 aa8.67□□□□□ -1.02
CHMP4A-205ENST00000531158 NEURL1O76050 574 aa8.67□□□□□ -1.02
CHMP4A-205ENST00000531158 ERVK-10P10266 1014 aa8.67□□□□□ -1.02
CHMP4A-205ENST00000531158 IGFBP2P18065 325 aa8.67□□□□□ -1.02
CHMP4A-205ENST00000531158 NMBRP28336 390 aa8.67□□□□□ -1.02
CHMP4A-205ENST00000531158 CMPK1P30085 196 aa8.67□□□□□ -1.02
CHMP4A-205ENST00000531158 SSTR2P30874 369 aa8.67□□□□□ -1.02
CHMP4A-205ENST00000531158 CD96P40200 585 aa8.67□□□□□ -1.02
CHMP4A-205ENST00000531158 TTPAP49638 278 aa8.67□□□□□ -1.02
CHMP4A-205ENST00000531158 PRAMEP78395 509 aa8.67□□□□□ -1.02
CHMP4A-205ENST00000531158 KCNJ11Q14654 390 aa8.67□□□□□ -1.02
CHMP4A-205ENST00000531158 ZNF468Q5VIY5 522 aaPredicted RBP8.67□□□□□ -1.02
CHMP4A-205ENST00000531158 GARNL3Q5VVW2 1013 aa8.67□□□□□ -1.02
CHMP4A-205ENST00000531158 PLAG1Q6DJT9 500 aa8.67□□□□□ -1.02
CHMP4A-205ENST00000531158 PTRHD1Q6GMV3 140 aaKnown RBP8.67□□□□□ -1.02
CHMP4A-205ENST00000531158 C6orf89Q6UWU4 347 aa8.67□□□□□ -1.02
CHMP4A-205ENST00000531158 OTOAQ7RTW8 1153 aa8.67□□□□□ -1.02
CHMP4A-205ENST00000531158 PDSS2Q86YH6 399 aa8.67□□□□□ -1.02
CHMP4A-205ENST00000531158 DOLPP1Q86YN1 238 aa8.67□□□□□ -1.02
CHMP4A-205ENST00000531158 SPPL2CQ8IUH8 684 aa8.67□□□□□ -1.02
CHMP4A-205ENST00000531158 MARVELD2Q8N4S9 558 aa8.67□□□□□ -1.02
CHMP4A-205ENST00000531158 GIMAP7Q8NHV1 300 aa8.67□□□□□ -1.02
CHMP4A-205ENST00000531158 AGAP11Q8TF27 550 aa8.67□□□□□ -1.02
CHMP4A-205ENST00000531158 ZNF480Q8WV37 535 aa8.67□□□□□ -1.02
CHMP4A-205ENST00000531158 SKA2Q8WVK7 121 aaPredicted RBP8.67□□□□□ -1.02
CHMP4A-205ENST00000531158 C1orf54Q8WWF1 131 aa8.67□□□□□ -1.02
CHMP4A-205ENST00000531158 PEX13Q92968 403 aa8.67□□□□□ -1.02
CHMP4A-205ENST00000531158 CHMP6Q96FZ7 201 aa8.67□□□□□ -1.02
CHMP4A-205ENST00000531158 CCDC138Q96M89 665 aa8.67□□□□□ -1.02
CHMP4A-205ENST00000531158 DMRTA2Q96SC8 542 aa8.67□□□□□ -1.02
CHMP4A-205ENST00000531158 CYTH2Q99418 400 aa8.67□□□□□ -1.02
CHMP4A-205ENST00000531158 PKP4Q99569 1192 aa8.67□□□□□ -1.02
CHMP4A-205ENST00000531158 SPOCK3Q9BQ16 436 aa8.67□□□□□ -1.02
CHMP4A-205ENST00000531158 DRC3Q9H069 523 aa8.67□□□□□ -1.02
CHMP4A-205ENST00000531158 PPCSQ9HAB8 311 aa8.67□□□□□ -1.02
CHMP4A-205ENST00000531158 MRPS30Q9NP92 439 aaKnown RBP8.67□□□□□ -1.02
CHMP4A-205ENST00000531158 KLHL1Q9NR64 748 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms