RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 SHKBP1Q8TBC3 707 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 LRCH3Q96II8 777 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 TMEM209Q96SK2 561 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 PDCD2LQ9BRP1 358 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 CHST7Q9NS84 486 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 RNF6Q9Y252 685 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 RGPD3A6NKT7 1758 aaPredicted RBP7.03□□□□□ -1.28
CTNND1-229ENST00000531014 RGPD4Q7Z3J3 1758 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 SALL3Q9BXA9 1300 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 A0A0A6YYH2 397 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 A6NJ64 397 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 GSG1L2A8MUP6 293 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 PKMP14618 531 aaKnown RBP7.03□□□□□ -1.28
CTNND1-229ENST00000531014 CSF2RAP15509 400 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 FUT4P22083 530 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 PSMB4P28070 264 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 CLCN4P51793 760 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 BIDP55957 195 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 ACTA2P62736 377 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 ACTG2P63267 376 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 ACTC1P68032 377 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 ACTA1P68133 377 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 GALEQ14376 348 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 NFATC4Q14934 902 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 PTCHD3Q3KNS1 767 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 FNDC3BQ53EP0 1204 aaKnown RBP7.03□□□□□ -1.28
CTNND1-229ENST00000531014 PIGGQ5H8A4 983 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 RAB41Q5JT25 222 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 XKR5Q6UX68 686 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 CACUL1Q86Y37 369 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 FAM58AQ8N1B3 248 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 FTMTQ8N4E7 242 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 MAB21L3Q8N8X9 362 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 SUMF2Q8NBJ7 301 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 PROKR2Q8NFJ6 384 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 OR10G2Q8NGC3 310 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 ST7LQ8TDW4 575 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 ABHD5Q8WTS1 349 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 SUSD6Q92537 303 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 COQ10AQ96MF6 247 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 C7orf26Q96N11 449 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 SLC6A7Q99884 636 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 TCEAL2Q9H3H9 227 aaPredicted RBP7.03□□□□□ -1.28
CTNND1-229ENST00000531014 KLK14Q9P0G3 267 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 EXTL2Q9UBQ6 330 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 C2orf78A6NCI8 922 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 ZNF726A6NNF4 738 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 CIDEAO60543 219 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 CXCR3P49682 368 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 MPP1Q00013 466 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 ZNF33AQ06730 810 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 UGCGQ16739 394 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 NDUFA9Q16795 377 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 CTC1Q2NKJ3 1217 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 EML3Q32P44 896 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 KHDC1Q4VXA5 237 aaKnown RBP7.03□□□□□ -1.28
CTNND1-229ENST00000531014 RAET1GQ6H3X3 334 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 PGAP1Q75T13 922 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 GPR135Q8IZ08 494 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 OR10T2Q8NGX3 314 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 DNAJB8Q8NHS0 232 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 EDEM1Q92611 657 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 ZDHHC12Q96GR4 267 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 SNX27Q96L92 541 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 YIPF4Q9BSR8 244 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 BTBD2Q9BX70 525 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 PATZ1Q9HBE1 687 aaKnown RBP7.03□□□□□ -1.28
CTNND1-229ENST00000531014 AMBNQ9NP70 447 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 VNN3Q9NY84 501 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 GLTPQ9NZD2 209 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 COL18A1P39060 1754 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 OR6C74A6NCV1 312 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 NT5C1B-RDH14C9J2C7 533 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 NUPL2O15504 423 aaKnown RBP7.03□□□□□ -1.28
CTNND1-229ENST00000531014 DFNA5O60443 496 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 CYBAP13498 195 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 MPSTP25325 297 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 HNRNPKP61978 463 aaKnown RBP eCLIP7.03□□□□□ -1.286e-14■□□□□ 9.1
CTNND1-229ENST00000531014 RRAS2P62070 204 aaPredicted RBP7.03□□□□□ -1.28
CTNND1-229ENST00000531014 GRB2P62993 217 aaKnown RBP7.03□□□□□ -1.28
CTNND1-229ENST00000531014 CSNK2A1P68400 391 aaPredicted RBP7.03□□□□□ -1.28
CTNND1-229ENST00000531014 LRP8Q14114 963 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 HABP2Q14520 560 aaPredicted RBP7.03□□□□□ -1.28
CTNND1-229ENST00000531014 ETFRF1Q6IPR1 90 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 FAM35AQ86V20 835 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 TRABD2AQ86V40 505 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 LILRB2Q8N423 598 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 CSNK2A3Q8NEV1 391 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 ZNF420Q8TAQ5 688 aaPredicted RBP7.03□□□□□ -1.28
CTNND1-229ENST00000531014 PLEKHO2Q8TD55 490 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 METTL21AQ8WXB1 218 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 C2orf49Q9BVC5 232 aaPredicted RBP7.03□□□□□ -1.28
CTNND1-229ENST00000531014 FBXO5Q9UKT4 447 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 DLGAP4Q9Y2H0 992 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 GPSM3Q9Y4H4 160 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 NOX1Q9Y5S8 564 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 ST14Q9Y5Y6 855 aa7.03□□□□□ -1.28
CTNND1-229ENST00000531014 A0A1B0GVI7 797 aa7.02□□□□□ -1.28
CTNND1-229ENST00000531014 A8MX80 341 aa7.02□□□□□ -1.28
CTNND1-229ENST00000531014 CLDN4O14493 209 aa7.02□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms