RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 DPY19L1Q2PZI1 675 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 FAM214AQ32MH5 1076 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 CYBRD1Q53TN4 286 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 UBXN11Q5T124 520 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 PAMR1Q6UXH9 720 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 GOLGA7Q7Z5G4 137 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 PHYKPLQ8IUZ5 450 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 SCAMP5Q8TAC9 235 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 LRRN3Q9H3W5 708 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 CCDC86Q9H6F5 360 aaKnown RBP7.41□□□□□ -1.22
CTNND1-223ENST00000529986 RANBP3Q9H6Z4 567 aaPredicted RBP7.41□□□□□ -1.22
CTNND1-223ENST00000529986 TMEM39AQ9NV64 488 aa7.41□□□□□ -1.22
CTNND1-223ENST00000529986 MRPS23Q9Y3D9 190 aaKnown RBP7.41□□□□□ -1.22
CTNND1-223ENST00000529986 A8MU76 341 aa7.4□□□□□ -1.22
CTNND1-223ENST00000529986 VILLO15195 856 aa7.4□□□□□ -1.22
CTNND1-223ENST00000529986 LDB2O43679 373 aa7.4□□□□□ -1.22
CTNND1-223ENST00000529986 PVALBP20472 110 aaPredicted RBP7.4□□□□□ -1.22
CTNND1-223ENST00000529986 OPRL1P41146 370 aa7.4□□□□□ -1.22
CTNND1-223ENST00000529986 MAGEA11P43364 429 aa7.4□□□□□ -1.22
CTNND1-223ENST00000529986 SOX2P48431 317 aa7.4□□□□□ -1.22
CTNND1-223ENST00000529986 AGTR2P50052 363 aa7.4□□□□□ -1.22
CTNND1-223ENST00000529986 YBEYP58557 167 aaPredicted RBP7.4□□□□□ -1.22
CTNND1-223ENST00000529986 C1QTNF8P60827 252 aa7.4□□□□□ -1.22
CTNND1-223ENST00000529986 SLBPQ14493 270 aaKnown RBP eCLIP7.4□□□□□ -1.22
CTNND1-223ENST00000529986 PTPRCAPQ14761 206 aa7.4□□□□□ -1.22
CTNND1-223ENST00000529986 SPIN3Q5JUX0 258 aa7.4□□□□□ -1.22
CTNND1-223ENST00000529986 CEACAM20Q6UY09 585 aa7.4□□□□□ -1.22
CTNND1-223ENST00000529986 TMPRSS9Q7Z410 1059 aa7.4□□□□□ -1.22
CTNND1-223ENST00000529986 METTL3Q86U44 580 aaKnown RBP7.4□□□□□ -1.22
CTNND1-223ENST00000529986 ZFP41Q8N8Y5 198 aa7.4□□□□□ -1.22
CTNND1-223ENST00000529986 FAM46DQ8NEK8 389 aa7.4□□□□□ -1.22
CTNND1-223ENST00000529986 DNAJB8Q8NHS0 232 aa7.4□□□□□ -1.22
CTNND1-223ENST00000529986 MFSD8Q8NHS3 518 aa7.4□□□□□ -1.22
CTNND1-223ENST00000529986 FBXO27Q8NI29 283 aa7.4□□□□□ -1.22
CTNND1-223ENST00000529986 THEM6Q8WUY1 208 aa7.4□□□□□ -1.22
CTNND1-223ENST00000529986 ZUFSPQ96AP4 578 aa7.4□□□□□ -1.22
CTNND1-223ENST00000529986 S100A16Q96FQ6 103 aaKnown RBP7.4□□□□□ -1.22
CTNND1-223ENST00000529986 PRRG4Q9BZD6 226 aa7.4□□□□□ -1.22
CTNND1-223ENST00000529986 LHPPQ9H008 270 aa7.4□□□□□ -1.22
CTNND1-223ENST00000529986 ZNF226Q9NYT6 803 aa7.4□□□□□ -1.22
CTNND1-223ENST00000529986 SEC14L4Q9UDX3 406 aa7.4□□□□□ -1.22
CTNND1-223ENST00000529986 RNF11Q9Y3C5 154 aa7.4□□□□□ -1.22
CTNND1-223ENST00000529986 PCDHGB7Q9Y5F8 929 aa7.4□□□□□ -1.22
CTNND1-223ENST00000529986 SLIT2O94813 1529 aa7.4□□□□□ -1.22
CTNND1-223ENST00000529986 KCPQ6ZWJ8 1503 aa7.4□□□□□ -1.22
CTNND1-223ENST00000529986 KAT6AQ92794 2004 aa7.4□□□□□ -1.22
CTNND1-223ENST00000529986 DISP2A7MBM2 1401 aa7.4□□□□□ -1.22
CTNND1-223ENST00000529986 TEX13DA0A0J9YY54 714 aaPredicted RBP7.4□□□□□ -1.22
CTNND1-223ENST00000529986 A6NHS1 94 aa7.4□□□□□ -1.22
CTNND1-223ENST00000529986 PROM1O43490 865 aa7.4□□□□□ -1.22
CTNND1-223ENST00000529986 FKTNO75072 461 aa7.4□□□□□ -1.22
CTNND1-223ENST00000529986 EIF1AXP47813 144 aaKnown RBP7.4□□□□□ -1.22
CTNND1-223ENST00000529986 GRB7Q14451 532 aa7.4□□□□□ -1.22
CTNND1-223ENST00000529986 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.4□□□□□ -1.22
CTNND1-223ENST00000529986 SIRPB2Q5JXA9 342 aa7.4□□□□□ -1.22
CTNND1-223ENST00000529986 CHADLQ6NUI6 762 aa7.4□□□□□ -1.22
CTNND1-223ENST00000529986 WASH2PQ6VEQ5 465 aa7.4□□□□□ -1.22
CTNND1-223ENST00000529986 PM20D2Q8IYS1 436 aa7.4□□□□□ -1.22
CTNND1-223ENST00000529986 TXNDC5Q8NBS9 432 aaKnown RBP7.4□□□□□ -1.22
CTNND1-223ENST00000529986 C3orf58Q8NDZ4 430 aa7.4□□□□□ -1.22
CTNND1-223ENST00000529986 CMASQ8NFW8 434 aaPredicted RBP7.4□□□□□ -1.22
CTNND1-223ENST00000529986 OR51G2Q8NGK0 314 aa7.4□□□□□ -1.22
CTNND1-223ENST00000529986 NEIL3Q8TAT5 605 aa7.4□□□□□ -1.22
CTNND1-223ENST00000529986 RBM18Q96H35 190 aaKnown RBP7.4□□□□□ -1.22
CTNND1-223ENST00000529986 WRAP73Q9P2S5 460 aaPredicted RBP7.4□□□□□ -1.22
CTNND1-223ENST00000529986 GTF2IRD1Q9UHL9 959 aa7.4□□□□□ -1.22
CTNND1-223ENST00000529986 MRTO4Q9UKD2 239 aaKnown RBP7.4□□□□□ -1.22
CTNND1-223ENST00000529986 ERVK-19Q9WJR5 959 aa7.4□□□□□ -1.22
CTNND1-223ENST00000529986 PHLPP1O60346 1717 aa7.4□□□□□ -1.22
CTNND1-223ENST00000529986 OR6C74A6NCV1 312 aa7.4□□□□□ -1.23
CTNND1-223ENST00000529986 CD8B2A6NJW9 211 aa7.4□□□□□ -1.23
CTNND1-223ENST00000529986 E7EQ34 232 aa7.4□□□□□ -1.23
CTNND1-223ENST00000529986 EIF1AYO14602 144 aaKnown RBP7.4□□□□□ -1.23
CTNND1-223ENST00000529986 GRM6O15303 877 aa7.4□□□□□ -1.23
CTNND1-223ENST00000529986 ARL6IP5O75915 188 aa7.4□□□□□ -1.23
CTNND1-223ENST00000529986 RENP00797 406 aa7.4□□□□□ -1.23
CTNND1-223ENST00000529986 CD8BP10966 210 aa7.4□□□□□ -1.23
CTNND1-223ENST00000529986 EPCAMP16422 314 aa7.4□□□□□ -1.23
CTNND1-223ENST00000529986 ARL2P36404 184 aa7.4□□□□□ -1.23
CTNND1-223ENST00000529986 PSMD8P48556 350 aa7.4□□□□□ -1.23
CTNND1-223ENST00000529986 NRG3P56975 720 aa7.4□□□□□ -1.23
CTNND1-223ENST00000529986 RAB5BP61020 215 aa7.4□□□□□ -1.23
CTNND1-223ENST00000529986 DSG2Q14126 1118 aa7.4□□□□□ -1.23
CTNND1-223ENST00000529986 ELP2Q6IA86 826 aa7.4□□□□□ -1.23
CTNND1-223ENST00000529986 RAB11FIP2Q7L804 512 aa7.4□□□□□ -1.23
CTNND1-223ENST00000529986 HMGN2P46Q86SG4 172 aa7.4□□□□□ -1.23
CTNND1-223ENST00000529986 COMTD1Q86VU5 262 aa7.4□□□□□ -1.23
CTNND1-223ENST00000529986 NIPA2Q8N8Q9 360 aa7.4□□□□□ -1.23
CTNND1-223ENST00000529986 ZNF557Q8N988 423 aaPredicted RBP7.4□□□□□ -1.23
CTNND1-223ENST00000529986 BOLLQ8N9W6 283 aaKnown RBP7.4□□□□□ -1.23
CTNND1-223ENST00000529986 SPPL2BQ8TCT7 592 aa7.4□□□□□ -1.23
CTNND1-223ENST00000529986 TCEAL4Q96EI5 215 aa7.4□□□□□ -1.23
CTNND1-223ENST00000529986 ZNF486Q96H40 463 aaPredicted RBP7.4□□□□□ -1.23
CTNND1-223ENST00000529986 LRCH3Q96II8 777 aa7.4□□□□□ -1.23
CTNND1-223ENST00000529986 FCRL5Q96RD9 977 aa7.4□□□□□ -1.23
CTNND1-223ENST00000529986 MMP28Q9H239 520 aa7.4□□□□□ -1.23
CTNND1-223ENST00000529986 RGCCQ9H4X1 137 aa7.4□□□□□ -1.23
CTNND1-223ENST00000529986 VNN3Q9NY84 501 aa7.4□□□□□ -1.23
CTNND1-223ENST00000529986 SIRPGQ9P1W8 387 aa7.4□□□□□ -1.23
CTNND1-223ENST00000529986 DFNA5O60443 496 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms