RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 RGS1Q08116 209 aa12.02□□□□□ -0.49
CCDC90B-216ENST00000529856 HYAL2Q12891 473 aa12.02□□□□□ -0.49
CCDC90B-216ENST00000529856 CHIT1Q13231 466 aa12.02□□□□□ -0.49
CCDC90B-216ENST00000529856 LAPTM5Q13571 262 aa12.02□□□□□ -0.49
CCDC90B-216ENST00000529856 SLBPQ14493 270 aaKnown RBP eCLIP12.02□□□□□ -0.49
CCDC90B-216ENST00000529856 NAA30Q147X3 362 aaPredicted RBP12.02□□□□□ -0.49
CCDC90B-216ENST00000529856 HERC3Q15034 1050 aa12.02□□□□□ -0.49
CCDC90B-216ENST00000529856 PCBP2Q15366 365 aaKnown RBP eCLIP12.02□□□□□ -0.49
CCDC90B-216ENST00000529856 VWA2Q5GFL6 755 aa12.02□□□□□ -0.49
CCDC90B-216ENST00000529856 XKR6Q5GH73 641 aa12.02□□□□□ -0.49
CCDC90B-216ENST00000529856 METTL2BQ6P1Q9 378 aaKnown RBP12.02□□□□□ -0.49
CCDC90B-216ENST00000529856 PPP1R32Q7Z5V6 425 aa12.02□□□□□ -0.49
CCDC90B-216ENST00000529856 LCA5Q86VQ0 697 aa12.02□□□□□ -0.49
CCDC90B-216ENST00000529856 PDSS2Q86YH6 399 aa12.02□□□□□ -0.49
CCDC90B-216ENST00000529856 TDRPQ86YL5 185 aa12.02□□□□□ -0.49
CCDC90B-216ENST00000529856 TMEM151AQ8N4L1 468 aa12.02□□□□□ -0.49
CCDC90B-216ENST00000529856 TEX9Q8N6V9 391 aa12.02□□□□□ -0.49
CCDC90B-216ENST00000529856 TTLQ8NG68 377 aa12.02□□□□□ -0.49
CCDC90B-216ENST00000529856 ZCCHC10Q8TBK6 192 aa12.02□□□□□ -0.49
CCDC90B-216ENST00000529856 ACMSDQ8TDX5 336 aa12.02□□□□□ -0.49
CCDC90B-216ENST00000529856 CREB3L4Q8TEY5 395 aa12.02□□□□□ -0.49
CCDC90B-216ENST00000529856 AENQ8WTP8 325 aaKnown RBP12.02□□□□□ -0.49
CCDC90B-216ENST00000529856 MIEF2Q96C03 454 aa12.02□□□□□ -0.49
CCDC90B-216ENST00000529856 SEC16BQ96JE7 1060 aa12.02□□□□□ -0.49
CCDC90B-216ENST00000529856 EFCAB11Q9BUY7 163 aa12.02□□□□□ -0.49
CCDC90B-216ENST00000529856 YIPF2Q9BWQ6 316 aa12.02□□□□□ -0.49
CCDC90B-216ENST00000529856 SEMA4CQ9C0C4 833 aa12.02□□□□□ -0.49
CCDC90B-216ENST00000529856 TGIF2Q9GZN2 237 aa12.02□□□□□ -0.49
CCDC90B-216ENST00000529856 SLC6A16Q9GZN6 736 aa12.02□□□□□ -0.49
CCDC90B-216ENST00000529856 MRPL46Q9H2W6 279 aaKnown RBP12.02□□□□□ -0.49
CCDC90B-216ENST00000529856 SOX17Q9H6I2 414 aaPredicted RBP12.02□□□□□ -0.49
CCDC90B-216ENST00000529856 MKKSQ9NPJ1 570 aaPredicted RBP12.02□□□□□ -0.49
CCDC90B-216ENST00000529856 CPSF2Q9P2I0 782 aaKnown RBP12.02□□□□□ -0.49
CCDC90B-216ENST00000529856 TRPC4Q9UBN4 977 aa12.02□□□□□ -0.49
CCDC90B-216ENST00000529856 TBK1Q9UHD2 729 aa12.02□□□□□ -0.49
CCDC90B-216ENST00000529856 TUBD1Q9UJT1 453 aa12.02□□□□□ -0.49
CCDC90B-216ENST00000529856 ZNF490Q9ULM2 529 aaPredicted RBP12.02□□□□□ -0.49
CCDC90B-216ENST00000529856 TMCO1Q9UM00 188 aa12.02□□□□□ -0.49
CCDC90B-216ENST00000529856 TNPO3Q9Y5L0 923 aaKnown RBP12.02□□□□□ -0.49
CCDC90B-216ENST00000529856 LRRC14BA6NHZ5 514 aa12.01□□□□□ -0.49
CCDC90B-216ENST00000529856 ARGFXA6NJG6 315 aa12.01□□□□□ -0.49
CCDC90B-216ENST00000529856 SGK494L7N484 410 aa12.01□□□□□ -0.49
CCDC90B-216ENST00000529856 FFAR3O14843 346 aa12.01□□□□□ -0.49
CCDC90B-216ENST00000529856 GPR42O15529 346 aa12.01□□□□□ -0.49
CCDC90B-216ENST00000529856 KLHL18O94889 574 aa12.01□□□□□ -0.49
CCDC90B-216ENST00000529856 IGHEP01854 428 aa12.01□□□□□ -0.49
CCDC90B-216ENST00000529856 SBK3P0C264 359 aa12.01□□□□□ -0.49
CCDC90B-216ENST00000529856 SMIM10L1P0DMW3 83 aa12.01□□□□□ -0.49
CCDC90B-216ENST00000529856 EPB42P16452 691 aa12.01□□□□□ -0.49
CCDC90B-216ENST00000529856 ALOX12P18054 663 aa12.01□□□□□ -0.49
CCDC90B-216ENST00000529856 CD22P20273 847 aa12.01□□□□□ -0.49
CCDC90B-216ENST00000529856 MMP11P24347 488 aa12.01□□□□□ -0.49
CCDC90B-216ENST00000529856 GSTM2P28161 218 aa12.01□□□□□ -0.49
CCDC90B-216ENST00000529856 KLC1Q07866 573 aa12.01□□□□□ -0.49
CCDC90B-216ENST00000529856 KCNAB2Q13303 367 aa12.01□□□□□ -0.49
CCDC90B-216ENST00000529856 ATP1A4Q13733 1029 aa12.01□□□□□ -0.49
CCDC90B-216ENST00000529856 RASA2Q15283 850 aa12.01□□□□□ -0.49
CCDC90B-216ENST00000529856 HIST2H2ACQ16777 129 aaPredicted RBP12.01□□□□□ -0.49
CCDC90B-216ENST00000529856 SYT16Q17RD7 645 aa12.01□□□□□ -0.49
CCDC90B-216ENST00000529856 PAGE2BQ5JRK9 111 aa12.01□□□□□ -0.49
CCDC90B-216ENST00000529856 HIST2H2AA3Q6FI13 130 aa12.01□□□□□ -0.49
CCDC90B-216ENST00000529856 EMBQ6PCB8 327 aa12.01□□□□□ -0.49
CCDC90B-216ENST00000529856 SHISA6Q6ZSJ9 500 aa12.01□□□□□ -0.49
CCDC90B-216ENST00000529856 MED25Q71SY5 747 aa12.01□□□□□ -0.49
CCDC90B-216ENST00000529856 MRGPREQ86SM8 312 aa12.01□□□□□ -0.49
CCDC90B-216ENST00000529856 LAPTM4BQ86VI4 370 aa12.01□□□□□ -0.49
CCDC90B-216ENST00000529856 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.01□□□□□ -0.49
CCDC90B-216ENST00000529856 PTGR2Q8N8N7 351 aaPredicted RBP12.01□□□□□ -0.49
CCDC90B-216ENST00000529856 TMEM102Q8N9M5 508 aaPredicted RBP12.01□□□□□ -0.49
CCDC90B-216ENST00000529856 UTP15Q8TED0 518 aaKnown RBP12.01□□□□□ -0.49
CCDC90B-216ENST00000529856 PHF21BQ96EK2 531 aa12.01□□□□□ -0.49
CCDC90B-216ENST00000529856 SMIM10Q96HG1 83 aa12.01□□□□□ -0.49
CCDC90B-216ENST00000529856 PARD6BQ9BYG5 372 aa12.01□□□□□ -0.49
CCDC90B-216ENST00000529856 TRIM55Q9BYV6 548 aa12.01□□□□□ -0.49
CCDC90B-216ENST00000529856 ING2Q9H160 280 aa12.01□□□□□ -0.49
CCDC90B-216ENST00000529856 RHBGQ9H310 441 aa12.01□□□□□ -0.49
CCDC90B-216ENST00000529856 KLHL31Q9H511 634 aa12.01□□□□□ -0.49
CCDC90B-216ENST00000529856 SEMA3GQ9NS98 782 aa12.01□□□□□ -0.49
CCDC90B-216ENST00000529856 C14orf105Q9NVL8 296 aa12.01□□□□□ -0.49
CCDC90B-216ENST00000529856 P4HTMQ9NXG6 502 aa12.01□□□□□ -0.49
CCDC90B-216ENST00000529856 XPR1Q9UBH6 696 aa12.01□□□□□ -0.49
CCDC90B-216ENST00000529856 NAALAD2Q9Y3Q0 740 aa12.01□□□□□ -0.49
CCDC90B-216ENST00000529856 PCSK5Q92824 1860 aa12.01□□□□□ -0.49
CCDC90B-216ENST00000529856 PIEZO2Q9H5I5 2752 aa12.01□□□□□ -0.49
CCDC90B-216ENST00000529856 MED13Q9UHV7 2174 aa12.01□□□□□ -0.49
CCDC90B-216ENST00000529856 A0A1W2PPM1 405 aa12□□□□□ -0.49
CCDC90B-216ENST00000529856 URADA6NGE7 173 aa12□□□□□ -0.49
CCDC90B-216ENST00000529856 ANKDD1BA6NHY2 528 aa12□□□□□ -0.49
CCDC90B-216ENST00000529856 EIF4E1BA6NMX2 242 aaKnown RBP12□□□□□ -0.49
CCDC90B-216ENST00000529856 STX16-NPEPL1H3BU86 382 aa12□□□□□ -0.49
CCDC90B-216ENST00000529856 GOLGA8RI6L899 631 aa12□□□□□ -0.49
CCDC90B-216ENST00000529856 PEX12O00623 359 aa12□□□□□ -0.49
CCDC90B-216ENST00000529856 E2F3O00716 465 aa12□□□□□ -0.49
CCDC90B-216ENST00000529856 STX16O14662 325 aa12□□□□□ -0.49
CCDC90B-216ENST00000529856 GALR3O60755 368 aaPredicted RBP12□□□□□ -0.49
CCDC90B-216ENST00000529856 SMIM24O75264 130 aa12□□□□□ -0.49
CCDC90B-216ENST00000529856 CLEC3AO75596 197 aa12□□□□□ -0.49
CCDC90B-216ENST00000529856 SIX3O95343 332 aaPredicted RBP12□□□□□ -0.49
CCDC90B-216ENST00000529856 BMP10O95393 424 aa12□□□□□ -0.49
CCDC90B-216ENST00000529856 ZNF888P0CJ79 500 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms