RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 IFNA2P01563 188 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 IFNGP01579 166 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 HLA-DQB1P01920 261 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 ALDOAP04075 364 aaKnown RBP5.62□□□□□ -1.51
CD44-225ENST00000527326 KLK3P07288 261 aaPredicted RBP5.62□□□□□ -1.51
CD44-225ENST00000527326 RAP2AP10114 183 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 MYCLP12524 364 aaPredicted RBP5.62□□□□□ -1.51
CD44-225ENST00000527326 CKMT1AP12532 417 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 CD1EP15812 388 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 TMEM11P17152 192 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 TFEBP19484 476 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 PVALBP20472 110 aaPredicted RBP5.62□□□□□ -1.51
CD44-225ENST00000527326 PAICSP22234 425 aaKnown RBP5.62□□□□□ -1.51
CD44-225ENST00000527326 GADD45AP24522 165 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 ATP5A1P25705 553 aaKnown RBP5.62□□□□□ -1.51
CD44-225ENST00000527326 ACADLP28330 430 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 PDHA2P29803 388 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 CDKN2BP42772 138 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 KIR2DL3P43628 341 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 HNMTP50135 292 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 ATXN1P54253 815 aaKnown RBP5.62□□□□□ -1.51
CD44-225ENST00000527326 EEFSECP57772 596 aaKnown RBP5.62□□□□□ -1.51
CD44-225ENST00000527326 RAB5BP61020 215 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 ACTR1AP61163 376 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 HNRNPKP61978 463 aaKnown RBP eCLIP5.62□□□□□ -1.51
CD44-225ENST00000527326 PSMC6P62333 389 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 PURAQ00577 322 aaKnown RBP5.62□□□□□ -1.51
CD44-225ENST00000527326 IL5RAQ01344 420 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 ZNF33AQ06730 810 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 ELP6Q0PNE2 266 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 KCNAB2Q13303 367 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 IRF3Q14653 427 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 SMCO1Q147U7 214 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 MAPKAPK3Q16644 382 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 WSCD2Q2TBF2 565 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 UAP1L1Q3KQV9 507 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 UGT3A2Q3SY77 523 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 FLYWCH1Q4VC44 716 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 FAM98BQ52LJ0 330 aaKnown RBP5.62□□□□□ -1.51
CD44-225ENST00000527326 SAPCD1Q5SSQ6 148 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 OTUD3Q5T2D3 398 aaPredicted RBP5.62□□□□□ -1.51
CD44-225ENST00000527326 AVPI1Q5T686 147 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 KIAA0319Q5VV43 1072 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 LIPMQ5VYY2 423 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 SAXO2Q658L1 398 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 INTS5Q6P9B9 1019 aaKnown RBP5.62□□□□□ -1.51
CD44-225ENST00000527326 TBPL2Q6SJ96 375 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 AFTPHQ6ULP2 937 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 HHIPL2Q6UWX4 724 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 KCTD1Q719H9 257 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 MON1BQ7L1V2 547 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 CHMP1BQ7LBR1 199 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 SLC16A13Q7RTY0 426 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 LRP10Q7Z4F1 713 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 B3GNT8Q7Z7M8 397 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 SLC47A2Q86VL8 602 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 CDKL3Q8IVW4 592 aaPredicted RBP5.62□□□□□ -1.51
CD44-225ENST00000527326 DENND6AQ8IWF6 608 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 NLGN1Q8N2Q7 840 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 NKAIN3Q8N8D7 197 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 ZNF527Q8NB42 609 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 AVL9Q8NBF6 648 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 LPCAT1Q8NF37 534 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 NLGN4YQ8NFZ3 816 aaPredicted RBP5.62□□□□□ -1.51
CD44-225ENST00000527326 CEP76Q8TAP6 659 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 FAM110BQ8TC76 370 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 ACTL9Q8TC94 416 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 GLYATL2Q8WU03 294 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 TMEM174Q8WUU8 243 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 BSNDQ8WZ55 320 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 GJA10Q969M2 543 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 TMBIM1Q969X1 311 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 SLC25A36Q96CQ1 311 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 FAF2Q96CS3 445 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 QRFPRQ96P65 431 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 SLC38A2Q96QD8 506 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 PIGSQ96S52 555 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 ACOX2Q99424 681 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 AGAP2Q99490 1192 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 EBNA1BP2Q99848 306 aaKnown RBP5.62□□□□□ -1.51
CD44-225ENST00000527326 C2orf88Q9BSF0 95 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 MARVELD1Q9BSK0 173 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 DPH7Q9BTV6 452 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 RSRP1Q9BUV0 290 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 GATA5Q9BWX5 397 aaPredicted RBP5.62□□□□□ -1.51
CD44-225ENST00000527326 BBS2Q9BXC9 721 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 AMBRA1Q9C0C7 1298 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 OSBPL2Q9H1P3 480 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 MED28Q9H204 178 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 VAT1LQ9HCJ6 419 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 PRDM5Q9NQX1 630 aaPredicted RBP5.62□□□□□ -1.51
CD44-225ENST00000527326 RASSF1Q9NS23 344 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 OXSMQ9NWU1 459 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 WWOXQ9NZC7 414 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 VSX1Q9NZR4 365 aaPredicted RBP5.62□□□□□ -1.51
CD44-225ENST00000527326 XPR1Q9UBH6 696 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 MAGEL2Q9UJ55 1249 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 SCP2D1Q9UJQ7 156 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 CDH9Q9ULB4 789 aa5.62□□□□□ -1.51
CD44-225ENST00000527326 AGTPBP1Q9UPW5 1226 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms