RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 TRIP13Q15645 432 aaPredicted RBP13.4□□□□□ -0.26
CPSF1-201ENST00000526271 MEP1AQ16819 746 aa13.4□□□□□ -0.26
CPSF1-201ENST00000526271 SEL1L2Q5TEA6 688 aa13.4□□□□□ -0.26
CPSF1-201ENST00000526271 ZNF470Q6ECI4 717 aa13.4□□□□□ -0.26
CPSF1-201ENST00000526271 MTFR2Q6P444 385 aa13.4□□□□□ -0.26
CPSF1-201ENST00000526271 SPNS3Q6ZMD2 512 aa13.4□□□□□ -0.26
CPSF1-201ENST00000526271 NFAM1Q8NET5 270 aaPredicted RBP13.4□□□□□ -0.26
CPSF1-201ENST00000526271 M1APQ8TC57 530 aa13.4□□□□□ -0.26
CPSF1-201ENST00000526271 PEX11GQ96HA9 241 aa13.4□□□□□ -0.26
CPSF1-201ENST00000526271 SPOCK3Q9BQ16 436 aa13.4□□□□□ -0.26
CPSF1-201ENST00000526271 RUBCNLQ9H714 662 aa13.4□□□□□ -0.26
CPSF1-201ENST00000526271 TMEM184CQ9NVA4 438 aa13.4□□□□□ -0.26
CPSF1-201ENST00000526271 PDE10AQ9Y233 779 aa13.4□□□□□ -0.26
CPSF1-201ENST00000526271 DHRS7Q9Y394 339 aa13.4□□□□□ -0.26
CPSF1-201ENST00000526271 TXNDC9O14530 226 aa13.39□□□□□ -0.27
CPSF1-201ENST00000526271 TTI1O43156 1089 aa13.39□□□□□ -0.27
CPSF1-201ENST00000526271 CCNDBP1O95273 360 aa13.39□□□□□ -0.27
CPSF1-201ENST00000526271 UQCRHP07919 91 aa13.39□□□□□ -0.27
CPSF1-201ENST00000526271 GABRB3P28472 473 aa13.39□□□□□ -0.27
CPSF1-201ENST00000526271 TPP2P29144 1249 aaPredicted RBP13.39□□□□□ -0.27
CPSF1-201ENST00000526271 HSD17B2P37059 387 aa13.39□□□□□ -0.27
CPSF1-201ENST00000526271 SLC1A2P43004 574 aa13.39□□□□□ -0.27
CPSF1-201ENST00000526271 ETF1P62495 437 aaKnown RBP13.39□□□□□ -0.27
CPSF1-201ENST00000526271 BTG2P78543 158 aa13.39□□□□□ -0.27
CPSF1-201ENST00000526271 MEF2AQ02078 507 aaPredicted RBP13.39□□□□□ -0.27
CPSF1-201ENST00000526271 RBPJQ06330 500 aa13.39□□□□□ -0.27
CPSF1-201ENST00000526271 ABRAXAS2Q15018 415 aa13.39□□□□□ -0.27
CPSF1-201ENST00000526271 PHKG1Q16816 387 aa13.39□□□□□ -0.27
CPSF1-201ENST00000526271 KRTCAP3Q53RY4 240 aa13.39□□□□□ -0.27
CPSF1-201ENST00000526271 RNF187Q5TA31 235 aaPredicted RBP13.39□□□□□ -0.27
CPSF1-201ENST00000526271 MFSD4BQ5TF39 518 aa13.39□□□□□ -0.27
CPSF1-201ENST00000526271 TTC27Q6P3X3 843 aa13.39□□□□□ -0.27
CPSF1-201ENST00000526271 SDCCAG8Q86SQ7 713 aaPredicted RBP13.39□□□□□ -0.27
CPSF1-201ENST00000526271 ZNF740Q8NDX6 193 aa13.39□□□□□ -0.27
CPSF1-201ENST00000526271 SUN3Q8TAQ9 357 aa13.39□□□□□ -0.27
CPSF1-201ENST00000526271 METTL21AQ8WXB1 218 aa13.39□□□□□ -0.27
CPSF1-201ENST00000526271 MAGED4Q96JG8 741 aa13.39□□□□□ -0.27
CPSF1-201ENST00000526271 OR4K3Q96R72 315 aa13.39□□□□□ -0.27
CPSF1-201ENST00000526271 UTP23Q9BRU9 249 aaKnown RBP13.39□□□□□ -0.27
CPSF1-201ENST00000526271 CDCP1Q9H5V8 836 aa13.39□□□□□ -0.27
CPSF1-201ENST00000526271 TRIM45Q9H8W5 580 aaPredicted RBP13.39□□□□□ -0.27
CPSF1-201ENST00000526271 FAM114A2Q9NRY5 505 aa13.39□□□□□ -0.27
CPSF1-201ENST00000526271 ZNF223Q9UK11 482 aaPredicted RBP13.39□□□□□ -0.27
CPSF1-201ENST00000526271 IKZF3Q9UKT9 509 aa13.39□□□□□ -0.27
CPSF1-201ENST00000526271 NAALAD2Q9Y3Q0 740 aa13.39□□□□□ -0.27
CPSF1-201ENST00000526271 CLDN16Q9Y5I7 305 aa13.39□□□□□ -0.27
CPSF1-201ENST00000526271 ANKHD1Q8IWZ3 2542 aaKnown RBP13.39□□□□□ -0.27
CPSF1-201ENST00000526271 FANCGO15287 622 aa13.38□□□□□ -0.27
CPSF1-201ENST00000526271 NME2P1O60361 137 aa13.38□□□□□ -0.27
CPSF1-201ENST00000526271 HAUS5O94927 633 aa13.38□□□□□ -0.27
CPSF1-201ENST00000526271 ESRRAP11474 423 aaPredicted RBP13.38□□□□□ -0.27
CPSF1-201ENST00000526271 CDH1P12830 882 aa13.38□□□□□ -0.27
CPSF1-201ENST00000526271 NPPBP16860 134 aa13.38□□□□□ -0.27
CPSF1-201ENST00000526271 NME2P22392 152 aa13.38□□□□□ -0.27
CPSF1-201ENST00000526271 EEF1DP29692 281 aaKnown RBP13.38□□□□□ -0.27
CPSF1-201ENST00000526271 SSTR2P30874 369 aa13.38□□□□□ -0.27
CPSF1-201ENST00000526271 RFC3P40938 356 aa13.38□□□□□ -0.27
CPSF1-201ENST00000526271 RPS15AP62244 130 aaKnown RBP13.38□□□□□ -0.27
CPSF1-201ENST00000526271 TLE4Q04727 773 aa13.38□□□□□ -0.27
CPSF1-201ENST00000526271 HYAL2Q12891 473 aa13.38□□□□□ -0.27
CPSF1-201ENST00000526271 NDUFA9Q16795 377 aa13.38□□□□□ -0.27
CPSF1-201ENST00000526271 LONRF1Q17RB8 773 aa13.38□□□□□ -0.27
CPSF1-201ENST00000526271 EMC4Q5J8M3 183 aa13.38□□□□□ -0.27
CPSF1-201ENST00000526271 SLC25A25Q6KCM7 469 aa13.38□□□□□ -0.27
CPSF1-201ENST00000526271 UBE2R2Q712K3 238 aaPredicted RBP13.38□□□□□ -0.27
CPSF1-201ENST00000526271 ASPGQ86U10 573 aa13.38□□□□□ -0.27
CPSF1-201ENST00000526271 CDH24Q86UP0 819 aa13.38□□□□□ -0.27
CPSF1-201ENST00000526271 PHF10Q8WUB8 498 aaKnown RBP13.38□□□□□ -0.27
CPSF1-201ENST00000526271 KCNJ9Q92806 393 aa13.38□□□□□ -0.27
CPSF1-201ENST00000526271 ZNF669Q96BR6 464 aaPredicted RBP13.38□□□□□ -0.27
CPSF1-201ENST00000526271 SGPP1Q9BX95 441 aa13.38□□□□□ -0.27
CPSF1-201ENST00000526271 ATG10Q9H0Y0 220 aa13.38□□□□□ -0.27
CPSF1-201ENST00000526271 MCCC2Q9HCC0 563 aa13.38□□□□□ -0.27
CPSF1-201ENST00000526271 INTS10Q9NVR2 710 aaKnown RBP13.38□□□□□ -0.27
CPSF1-201ENST00000526271 LRFN1Q9P244 771 aa13.38□□□□□ -0.27
CPSF1-201ENST00000526271 KLHL42Q9P2K6 505 aa13.38□□□□□ -0.27
CPSF1-201ENST00000526271 TEKT2Q9UIF3 430 aa13.38□□□□□ -0.27
CPSF1-201ENST00000526271 NEU2Q9Y3R4 380 aa13.38□□□□□ -0.27
CPSF1-201ENST00000526271 IGKV3D-11A0A0A0MRZ8 115 aa13.37□□□□□ -0.27
CPSF1-201ENST00000526271 FAM237BA0A1B0GVD1 139 aa13.37□□□□□ -0.27
CPSF1-201ENST00000526271 MAGEB17A8MXT2 336 aa13.37□□□□□ -0.27
CPSF1-201ENST00000526271 E5RI56 91 aa13.37□□□□□ -0.27
CPSF1-201ENST00000526271 TGFBR3LH3BV60 316 aa13.37□□□□□ -0.27
CPSF1-201ENST00000526271 GALR3O60755 368 aaPredicted RBP13.37□□□□□ -0.27
CPSF1-201ENST00000526271 TSPAN12O95859 305 aa13.37□□□□□ -0.27
CPSF1-201ENST00000526271 TUBB4AP04350 444 aa13.37□□□□□ -0.27
CPSF1-201ENST00000526271 MAGEA3P43357 314 aa13.37□□□□□ -0.27
CPSF1-201ENST00000526271 VPS41P49754 854 aa13.37□□□□□ -0.27
CPSF1-201ENST00000526271 AGTR2P50052 363 aa13.37□□□□□ -0.27
CPSF1-201ENST00000526271 SMSP52788 366 aa13.37□□□□□ -0.27
CPSF1-201ENST00000526271 MLF1P58340 268 aa13.37□□□□□ -0.27
CPSF1-201ENST00000526271 NSDHLQ15738 373 aa13.37□□□□□ -0.27
CPSF1-201ENST00000526271 EXT1Q16394 746 aa13.37□□□□□ -0.27
CPSF1-201ENST00000526271 THEMIS2Q5TEJ8 643 aa13.37□□□□□ -0.27
CPSF1-201ENST00000526271 ARMC10Q8N2F6 343 aa13.37□□□□□ -0.27
CPSF1-201ENST00000526271 MFSD9Q8NBP5 474 aa13.37□□□□□ -0.27
CPSF1-201ENST00000526271 OR4K1Q8NGD4 311 aa13.37□□□□□ -0.27
CPSF1-201ENST00000526271 EEF1AKMT1Q8WVE0 214 aa13.37□□□□□ -0.27
CPSF1-201ENST00000526271 NDNQ99608 321 aa13.37□□□□□ -0.27
CPSF1-201ENST00000526271 SARGQ9BW04 601 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms