RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 DSG4Q86SJ6 1040 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 PIP4P1Q86T03 277 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 IFT20Q8IY31 132 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 ADGRF3Q8IZF5 1079 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 STK40Q8N2I9 435 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 ARL10Q8N8L6 244 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 NRACQ8N912 160 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 IL17RCQ8NAC3 791 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 NOA1Q8NC60 698 aaKnown RBP4.4□□□□□ -1.71
USP48-211ENST00000526044 BBOF1Q8ND07 529 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 OR2AP1Q8NGE2 309 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 OR52N4Q8NGI2 321 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 OR2A12Q8NGT7 310 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 RPLP0P6Q8NHW5 317 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 MPLKIPQ8TAP9 179 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 ATP6V1E2Q96A05 226 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 IMP4Q96G21 291 aaKnown RBP4.4□□□□□ -1.71
USP48-211ENST00000526044 ZNF48Q96MX3 618 aaPredicted RBP4.4□□□□□ -1.71
USP48-211ENST00000526044 GDAP1L1Q96MZ0 367 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 SPATA13Q96N96 652 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 ZNF347Q96SE7 839 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 MGME1Q9BQP7 344 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 ERP44Q9BS26 406 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 TMEM120AQ9BXJ8 343 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 TM6SF2Q9BZW4 377 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 TRIM31Q9BZY9 425 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 POLR1EQ9GZS1 481 aaKnown RBP4.4□□□□□ -1.71
USP48-211ENST00000526044 RAB17Q9H0T7 212 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 PABPC3Q9H361 631 aaKnown RBP4.4□□□□□ -1.71
USP48-211ENST00000526044 TBC1D17Q9HA65 648 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 NOD2Q9HC29 1040 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 PCDH9Q9HC56 1237 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 EPB41L5Q9HCM4 733 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 LTB4R2Q9NPC1 389 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 ZDHHC4Q9NPG8 344 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 PRSS16Q9NQE7 514 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 PRDM8Q9NQV8 689 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 NKIRAS2Q9NYR9 191 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 HEY2Q9UBP5 337 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 LHX3Q9UBR4 397 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 GIMAP2Q9UG22 337 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 ASIC3Q9UHC3 531 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 ANAPC5Q9UJX4 755 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 DAPP1Q9UN19 280 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 C19orf53Q9UNZ5 99 aaPredicted RBP4.4□□□□□ -1.71
USP48-211ENST00000526044 SNX24Q9Y343 169 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 MTF2Q9Y483 593 aaPredicted RBP4.4□□□□□ -1.71
USP48-211ENST00000526044 BRWD1Q9NSI6 2320 aa4.4□□□□□ -1.71
USP48-211ENST00000526044 LY6G6EA0A0G2JKS1 128 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 LOC285095A0A1B0GVY8 99 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 DPPA5A6NC42 116 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 ERI2A8K979 691 aaKnown RBP4.39□□□□□ -1.71
USP48-211ENST00000526044 ANKRD66B4E2M5 251 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 AP3B1O00203 1094 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 ALOX15BO15296 676 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 AHCYL1O43865 530 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 HEXIM1O94992 359 aaKnown RBP4.39□□□□□ -1.71
USP48-211ENST00000526044 MT-CYBP00156 380 aaPredicted RBP4.39□□□□□ -1.71
USP48-211ENST00000526044 AGTP01019 485 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 IL1BP01584 269 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 EPOP01588 193 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 POLBP06746 335 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 APRTP07741 180 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 MMP2P08253 660 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 ALDOCP09972 364 aaKnown RBP4.39□□□□□ -1.71
USP48-211ENST00000526044 RHOXF2BP0C7M4 288 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 HOXB2P14652 356 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 CA4P22748 312 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 PRKCHP24723 683 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 IVDP26440 423 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 PSMB4P28070 264 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 SERPINA4P29622 427 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 RGRP47804 291 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 CLCN5P51795 746 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 CCNHP51946 323 aaPredicted RBP4.39□□□□□ -1.71
USP48-211ENST00000526044 AP1S1P61966 158 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 POLR2LP62875 67 aaKnown RBP4.39□□□□□ -1.71
USP48-211ENST00000526044 BASP1P80723 227 aaKnown RBP4.39□□□□□ -1.71
USP48-211ENST00000526044 CDK16Q00536 496 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 GUCY2DQ02846 1103 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 CDK18Q07002 472 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 FOXO1Q12778 655 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 RPS6KA2Q15349 733 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 KCTD19Q17RG1 926 aaPredicted RBP4.39□□□□□ -1.71
USP48-211ENST00000526044 MIDNQ504T8 468 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 TEX35Q5T0J7 233 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 CFAP58Q5T655 872 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 ARMC12Q5T9G4 340 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 FAM46CQ5VWP2 391 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 DUPD1Q68J44 220 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 GDPD4Q6W3E5 623 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 SYT13Q7L8C5 426 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 KDELC2Q7Z4H8 507 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 LINC00523Q86TU6 105 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 PRPF39Q86UA1 669 aaKnown RBP4.39□□□□□ -1.71
USP48-211ENST00000526044 CAMK1DQ8IU85 385 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 MMAAQ8IVH4 418 aaKnown RBP4.39□□□□□ -1.71
USP48-211ENST00000526044 CACNA2D3Q8IZS8 1091 aa4.39□□□□□ -1.71
USP48-211ENST00000526044 PAQR4Q8N4S7 273 aaPredicted RBP4.39□□□□□ -1.71
USP48-211ENST00000526044 ZNF366Q8N895 744 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms